Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <-----------GT1                                                                       <---------ARR14(2)                                                                       <-----------GT1                            --------->ATHB12               <------ZmHOX2a(2)   <---------GLK1(2)                       --------->ARR11(3)                 --------->AGP1  ------->GAMYB                >>>>>>>>>WRKY18<-----------GT1            <---------ARR14(2)   --------->ARR14(2)            <----------DOF2<---------YAB1                 --------->ARR14(2)   <---------ARR14(2)           <---------DAG2------>ZmHOX2a(2)       --------->DAG2        --------->ARR14(2)        ---------->ID1 <---------ARR11(3)       ---------->DOF2<------ZmHOX2a(2) <-------TEIL   ----- ----ZmHOX2a(2)----------->HVH21<---------At5g28300  ----------->RAV1(1) --------->MYB46(3)     <----   atcaatttctgtcccttttgacagtgatcttgattaccgcttatgaaataaaaagcaccagatcgatcaagagtaaccacagattcaccattttcgaagt  21888100                                        --------->YAB1                                     <----------DOF2                              <---------ARR14(2)                               <---------ARR11(3)                        <---------ZAT18     --------                               --------->GLK1(2)                        <---------ANAC58    <--------        --------->GLK1(1)      --------->ARR11(3)                       <---------ANAC58    ---------        <---------GLK1(1)  --------->YAB1                              --------->HSFB2a(2)---------->DOF2    ------>ZmHOX2a(2)   --------->WOX13(1)                       ------>ZmHOX2a(2)--------->GLK1(2) --------->ATHB12      --------->MYB46(3)                     --------->At4g35610 --------->ARR11(3) ---->ARR11(3)<---------TOE1(3)--------->ARR14(2)             <---------At4g35610 --------->ARR14(2) -----ARR11(3)<---------TOE2(3)<---------ARR14(2)        <---------GLK1(2)        <---------ARR11(3)   tcttgatcggatttctaacgttgcatccatcaaaatctgctttcatcacttgttgaacagagtctgatcccttcgcgtacttaaaatctgcataaagatt  21888200                                                        <---------------------WRI1                          --------->DAG2        >>>>>>>>>MYB98 ->ATHB12                ---------->DOF2    --------->TOE1(3) -YAB1            --------->YAB1   ----------->GT1     ----------->GT1      --------->ATHB12     <--- >ICU4   <---------MYB46(3)  <----------ID1 --------->TOE2(3)   --------->MYB52(1)<---------ANAC46   gaatgtttttttggttagaatcagagtaaaagcgaccaagttaaaaccctaacaaaatggagaaacttacagagagagtcattgacttggaaacggtttc  21888300                                                      ----------->HVH21                                                      --------->DEAR3(1)                                                   --------->TOE2(2)                                                   --------->TOE1(2)                                               <---------MYB52(1)                            <---------ARR14(2) --------->DOF5.7(2)                            --------->ARR14(2)<-----------HVH21              --------->At4g35610                           <------ZmHOX2a(1)  <-------GAMYB      --------->TOE2(3)------->GAMYB  --------->At4g35610    <---------TOE2(3)  <------NtERF2 --------->TOE2(3) --------->ANAC46  <---------At4g35610<---------ANAC58     ------->GAMYB------>NtERF2  --------->AtLEC2   ---------->DOF2 -------DOF2         <---------ANAC58    --------->MYB46(3)--------->DOF5.7(2) --------->MYB52(1)   <   tttcagcccaagtattgtagttttcttgaggatttgtaacccaagcgccgttacctccgacgttaaacctccatgcatcagcaacggagaagaaagttgc  21888400                                              ------>NtERF2                                              <---------RAP2.6(3)                                              <---------DDF1  <---------ARR14(2)                                             --------->DEAR3(1)<------ZmHOX2a(2)                                             <---------ETT(1) <---------ARR11(3)                                             ----------->HVH21--------->AGP1                                             --------->RAP2.3(3)                                             --------->DREB2C(2)          <---------TOE1(3)                                             --------->DEAR4(1)--------->CCA1(2)                   ==============================HOX2a_HOX2a  <---------AGP1               ==================================HOX2a_HOX2a  <---------ARR14(3)               <------ZmHOX2a(1)             --------->At1g77200------>ZmHOX2a(2)             --------->ANAC58               --------->RAP2.3(1)--------->At4g35610             <---------TOE2(3)            ------>ZmHOX2a(2)   --------->ARR11(3)             --------->ANAC58          <---------ICU4         --------->ARR14(2)         <------ZmHOX2a(1)      <----------DOF2              --------->GLK1(1) ---------->DOF2   <------ZmHOX2a(1)  <---------YAB1         <---------GLK1(1) ---------ATHB12  ----------->GT1   --------->YAB1      <---------LBD16   <---------TOE2(3) <--------   aaatgaagcgaggataaggaaggagaaacagagacttttcatgatcgccgacatggttttcggagatctgaaaattagggtttttgtgttttgtcttttg  21888500                                    --------->AHL20(2)                                    <-----------TBP                                   <---------AHL20(1)                                   <---------ARR11(3)                                   --------->ARR11(3)                         <---------ANAC55(2)                                            <------------                  <---------ZAT14------->TEIL                                          <-------------                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                      --------->RVE1(1)             --------->ICU4   <---------YAB1                              --------->GLK1(2)      <---------ANAC46   --------->ANAC55(2)                              --------->ARR11(3)   <-----------RAV1(1)  --------->MYB59    <------ZmHOX2a(1)              <---------ARR11(3) --DOF2   *TSS--------->ATHB12--------->ICU4   --------->ICU4      ---------->DOF2    <-----------GT1   tgtttgtgttgtggaatgagtgaagttatgtaatgaatatatataggaacttatgagattacgaagaatcaaagaaaatctctgaaatttacaaaaatgg  21888600                                                                   <---------AHL20(2)                                                                   <--------ATHB1                                                                   <---------ICU4                                                                   --------->AHL20(2)                                                          ----------->GT1                                                         --------->MYB59                                                         --------->DAG2                                                         <---------TOE2(3)                                                         <---------TOE1(3)---------->DOF2                                                     <------MYB46(1) --------->ICU4                                                    --------->MYB59--------->YAB1                                                    --------->MYB46(2)  <---------YAB1                                                <---------YAB1     <---------AHL20(1)                                            <---------ARR11(3)    --------->ICU4        <---------AHL20(2)                      <----------DOF2       <---------GLK1(2)   <---------ICU4         <---------AHL20(2)                <---------At4g35610         --------->ARR11(3)  --------->YAB1         --------->AHL20(1)                --------->At4g35610   ---------->DOF2<------MYB83 <---------YAB1       <---------AHL20(1) ---AGL15  <---------ZAT6 <----------DOF2  <---------RVE1(1)   <---------YAB1          --------->AHL20(2) ----AGL1  ----------->HVH21  <----------DOF2--------->GLK1(2) --------->ICU4  ----------->GT1   aatacgaagattagtgacagaagactttctttctttatatcaaagagattttgtttggtaaggtaataataattttgaaagttgtgaaataaaattgaag  21888700                                                                                           <---------YAB1                                                                                         -------->ATHB1                                                                                         --------->ATHB51                                                                                         --------->YAB1                                                                                         <--------HAHB4                 --------->ALFIN1                                                        --------->ATHB12               <---------ANAC58                                                          -------->HAHB4               --------->O2                                                              <---------ICU4               <---------O2                                                              <---------AHL20(2)               --------->TGA1a   --------->ANAC55(2)                                    <---------YAB1               <---------ANAC46  --------->ANAC58                                       <---------ATHB51               <---------ANAC58  --------->ANAC55(1)                                 <---------AHL20(2)               <---------ANAC55(2)     <---------AHL20(2)           <---------AHL20(2)  --------->ICU4               <---------TGA1a   <---------ANAC55(2)  --------->AHL20(2)       <<<<<<<<<GATA-1               <---------ANAC55(1)    --------->AHL20(2)           <---------YAB1   --------->AHL20(2)    <---------YAB1               --------->ANAC58    --------->YAB1<---------WOX13(1)--------->AHL20(2)   <---------TOE2(3)    --------->CCA1(2)  <-----------GT1  --------->ATHB12  <-----------GT1    <---   gcatttatgttaagaagacgtgtgagatttgactcacgtattaattcacttcccataaaaattgatttgattaatggatttatctatttaattattagta  21888800               <---------AHL20(2)               --------->AHL20(2)          --------->ICU4          <---------YAB1                              <---------------AGL15        <---------ICU4                                --------------->AGL15        -------->HAHB4                               <-----------------AGL2        --------->YAB1                               ----------------->AGL3       --------->ICU4----------->GT1                 ----------------->AGL2       <---------ATHB12                              <-----------------AGL3      ---------->DOF2      <---------TOE2(3)                        <------MYB46(1)             --------->AHL20(2) ------YAB1--------->ATHB12                    <------MYB83                <---------AHL20(2)   tttttgttaatgatgatttaaatttgttaaaactattgacaaaatgggctggttttccatttttagtttgatttcatttatatgaaagctattgagtcta  21888900                                                                                --------->STY1(2)                                                                                <---------STY1(2)                                                                         <------MYB83                                                                     --------->ZAT2                                                                     --------->At4g35610                                                                     <---------ZAT2                                                                     <---------At4g35610                   <----------DOF2                                   <---------STY1(2)          --------->ATHB12          <---------LBD16              --------->STY1(2)         --------->ICU4           <----------DOF2     --------->GLK1(1)  <------MYB46(1)    ------>ZmHOX2a(1)         <---------ZAT6  <---------YAB1   <---------MYB46(3)     <---------STY1(2)         --------->TOE2(3)   cttgtatagtagtgattagctctttatatgattctactttcggattgttgtttctgaattctaaactagccagctaggtgctagctattacttccttatt  21889000  Previous    Next  AGI:  At5g53870.1    Description:  plastocyanin-like domain-containing protein. similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G27520.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69762.1); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) Range:  from: 21887090    to: 21888510    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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