Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->AHL20(2)                                         --------->AHL20(1)                                    <---------AHL20(2)                                    --------->AHL20(1)                               <---------AHL20(2)                                <---------YAB1                               --------->AHL20(2)                               --------->AHL20(1)                            <---------YAB1                                      <---------AHL20(1)                           --------->AHL20(2)                                --------->YAB1                           <---------AHL20(2)     ------->TEIL               --------->AHL20(2)                         <---------YAB1  <---------AHL20(1)        <----------DOF2     <---------TOE2(3)                   ------>ZmHOX2a(1)--------->AHL20(2)   <---------DAG2     <---------ATHB12    <----   tttggagcatgtcccaaattcctgtttattaatataaataaaatataatatgaatttcgccttatacatctttattcaataatatttttgagatagttct  21865000                                                                  ----------->GT1                                                            --------->TOE2(3)                                                            --------->TOE1(3)                                                           ----------->GT1                                --------->AHL20(2)        <-----------------------TaNAC69(2)                                <---------AHL20(2)       --------->MYB52(1)          --------->DAG2  <---------AHL20(2)      --------->YAB1<----------ID1 <---------MYB52(2) --------->ZAT6  --------->AHL20(2)     --------->AHL20(2)         ---------->DOF2     <-----------GT1           --- ------DOF2  --------->YAB1 --------->ICU4      ---------->DOF2 ---------->DOF2     ---------->DOF2 <   ttaaaaaattatcaaatataaaccaaaataaaaattaaaaaaaaaacaaaaaaagaaagtaacgataaaagtaataacacttcaaaaaaagtatagataa  21865100        ----------->HVH21      --------->At4g35610                                                                          >>      <---------At4g35610                                         ----------->GT1               -----      ----------->RAV1(2)                                       <---------ANAC58               ------    --------->YAB1                                              <---------ANAC46              ------- --------->YAB1                 ---------->DOF2                 <---------ANAC58    --------->AHL20(2) ------>YAB1 --------->AtLEC2  --------->AHL20(2)          <---------ICU4    <----------ID1 --------- ---------YAB1        ---------->DOF2                 <---------MYB59    ---------->DOF2 --------->TOE2(3)   ctataatcatctgacatgtaaacatatagcaaataaaagaattagattaagaactatctaactatgacttgtataaaaagaaacaaataaacatcaacag  21865200                                  --------->At4g35610                                  <---------At4g35610                             ------>ZmHOX2a(2)      <---------AHL20(2)    <------ZmHOX2a(2)     --------->AHL20(1)    <---------ARR14(2)     <---------AHL20(1)    --------->ARR14(2)                                                 ------- >>>>>>>MYB98              --------->ARR11(3)                                      ------------>CBF ---->At5g28300            <---------ARR11(3)                     --------->MYB52(1)          ------- ----->GT1            -------->P  ----------->RAV1(2)        --------->ICU4       --------->TOE2(3) -->ZAT6  <-----------GT1  <-----------ARR10               --------->YAB1      --------->ANAC46    -- -->RAV1(1)          <-----------GT1                      <---------ZAT6 <----------DOF2     <-------   taacatatatatttactgatgagttacccgatcttcacctgcaaatgaacaggcctactagtcataactaatgggctttctaaaccacaatattcttacg  21865300                    <---------AHL20(2)                    <---------YAB1                   <---------AHL20(1)                 <---------YAB1                 <---------TOE2(3)               --------->AHL20(2)              <---------AHL20(2)     <---------AHL20(1)     <---------AHL20(2)                                                                             <     --------->AHL20(1)                                                                         <----     --------->AHL20(2)                     <----------DOF2                                     <----    <---------AHL20(2)               --------->HSFB2a(2)                                        -----    --------->AHL20(2) <---------YAB1<---------HSFB2a(2)     --------->ANAC58           <---------MYB52(1) -->SPL7  --------->AHL20(2)        <---------ANAC46         --------->ANAC58          --------->LBD16 -->RAP2.6(3) --------->AHL20(2) --------->ARR14(2)          *TSS                     <---------DEAR3(1) ---------->CBF<---------AHL20(2)<---------ARR14(2)        <-----------GT1     --------->ARR11(3) --- ----GT1  <---------AHL20(2)   <---------TOE1(2) ---------->ID1               <---------At4g35610<---   gcccaattaaatttaaattaatattattattcgcagtttcgcgaggcttttgttttttttatcacggcctagtttagttaagctctcgccggtgatttag  21865400                                <------NtERF2                             <---------LBD16                            --------->LBD16                            ------>NtERF2                          <---------LBD16                         <---------ATERF1(1)                       --------->ZAT2                       --------->ABI4(2)          ----------->HVH21--------->DEAR3(1)                        --------->At4g35610  <---------ARR14(2) ---------ARR14(2)     <---------ZAT2                           --------->CCA1(2)    --------->LBD16 -----LBD16 <---------At5g28300--------->LBD16                  <---------GLK1(1)   --------->LBD16 -----At4g35610       --------->ALFIN1                          --------->GLK1(1)  --------->LBD16  - ---->At4g35610    <---------DEAR3(1)                          --------->ARR11(3)  <---------LBD16  < ------>LBD16    ------>NtERF2--------->DEAR3(1)               <---------ARR11(3) <---------LBD16 <-- ------ANAC46   ----------->HVH21      --------->ANAC46   --------->CCA1(2) <-----------ARR10    ----   cggagatgggaagtgaccgcgacggtgctccgccggagaacacaaaacgagaggttgaagatagagatatcagaagaaaatcatcccgggagaaaccgag  21865500                                            --------->LBD16                                            --------->At5g28300                                           <---------ANAC46                                          <------NtERF2                                         --------->ABI4(1)                                         ------>NtERF2                                        --------->ANAC46                                        --------->RRTF1(3)                                        --------->RAP2.3(3)                                        --------->RAP2.3(2)                                        --------->DEAR3(1)                                       <------NtERF2                --------->LBD16        --------->ATERF1(1)               <---------LBD16         --------->RAP2.6(1)           <---------ARR14(2)          --------->RRTF1(1)           --------->ARR14(2)          --------->ERF1                                     <---------ARR14(2)          <------ZmHOX2a(1)            --------->RAP2.3(1)                                --------->GLK1(2)      ---------->DOF2                  --------->ORA47(2)                                 ------->TEIL   --------->HSFB2a(2)                 --------->DEAR4(2)                         ------>NtERF2   <---------HSFB2a(2)                <---------ORA47(2)                          --------->LBD16   <---------HSFC1(1)                 <---------RAP2.3(1)                        <---------RAP2.6(2)   --------->HSFC1(1)                 <---------ATERF1(1)                     <---------ARR14(2)  <---------LBD16                    <---------DEAR3(1)                       --------->ARR14(2) -------->ARR14(2)                   --------->DEAR3(1)                <------NtERF2--------->ARR14(2) ---------ARR14(2)       ---------->DOF2<---------DEAR3(1)          --------->RAP2.6(3)   --------->ARR14(2) -------MYB46(3)------>NtERF2       --------->ATERF1(1)         ---------->DOF2 <---------LBD16 ----->ALFIN1 <---------LBD16 --------->CCA1(2)          <------ZmHOX2a(1)    --------->GLK1(2) <----   tggttctggaaaggattccggcgaagagaaagatgtgagtcgccgccgtgaatcgaagaggagaacaaaagacggcaacgattccggctctgaatctggt  21865600                                                                              <---------ATHB12                                                                            <---------GLK1(1)                                                                            --------->GLK1(1)                                                                        ===========================HOX2a_HOX2a                                                                        ------>ZmHOX2a(2)                                                                        =====================HOX2a_HOX2a                                                                       ============================HOX2a_HOX2a                                                                       ======================HOX2a_HOX2a                                                                       <------ZmHOX2a(2)                                                                      <---------ARR14(2)                                                                --------->GLK1(1)     <------ZmHOX2a(1)                                                                <---------GLK1(1)  <---------HSFB2a(2)                                                              <------ZmHOX2a(1)    --------->HSFB2a(2)              <---------ARR14(2)                              ================HOX2a_HOX2a              --------->ARR14(2)                ==============================HOX2a_HOX2a     --------->ALFIN1                           <------ZmHOX2a(1)     --------->ARR14(2)           <- ---------->DOF2                                ===============================HOX2a_HOX2a         -- -----ANAC46  --------->GLK1(2)  <---------ANAC46             =================HOX2a_HOX2a  <------ZmHOX2a(1)   ttggaaagtggaagcgaatcggagaaggaagagagacgtagaagtagaaaggatagagggaagaggaaatcagatcggaaatcatctaggagtaggagaa  21865700                                                       --------->GLK1(2)                                                      <---------ARR14(2)                                        --------->GLK1(2)           <------ZmHOX2a(1)                                       <---------GLK1(2)    <---------GLK1(2)                                    --------->YAB1    --------->KAN4(2)         --------->KAN4(2)  --------->GLK1(2)        <----------TaMYB80       --------->ICU4      <---------ARR14(2)        <---------KAN4(1)       <---------YAB1      <---------GLK1(2)         <---------HSFB2a(1)    <---------YAB1         --------->ARR14(2)        --------->KAN4(1)    --------->ICU4        <---------At4g35610        --------->HSFB2a(1)  <---------ANAC46        --------->At4g35610       <---------KAN4(2)                               < --------O2          --------->At4g35610--------->ARR14(2)<---------YAB1                       ------ ------->O2  <---------HSFB2a(2)--------->LBD16     ---------->TaMYB80            --------->ICU4 <---   gacgtcgtgattattcgagtagtagctcagattccgaatcagaatcggagtcggaatattctgattctgaggagagtgagagtgaagatgagagaagaag  21865800            ---------->DOF2               <------ZmHOX2a(1)      <------ZmHOX2a(1)                 ------------------------>ANAC81 ------ZmHOX2a(1)                 ---------->DOF2                 --------->CCA1(2)        ---------- ------------------>ANAC81   ------------------------>ANAC81 ---------->DOF2           <---------YAB1 ---ZmHOX2a(1)              <------ZmHOX2a(1)      <------ZmHOX2a(1)          <------ZmHOX2a(1)  ----   gaggaagaggaagagaaaggagagggaagaggaagagaaagagaggaagagaaggagaagagagaaagataagaagaagaggaacaagtctgataaagat  21865900  Previous    Next  AGI:  At5g53800.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO39254.1) Range:  from: 21865361    to: 21867337    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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