Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->ARR11(3)                   <---------TOE1(3)          <---------ANAC46        <---------GLK1(2)              <---------MYB46(3)              <---------REM1(1)     <---------TOE2(3)              <------MYB83      <------------MYB.PH3(1) <------MYB83<---------TOE1(3)              <------MYB46(1) --------->MYB52(1)        <------MYB46(1)          <---------AHL20(2)          --------->ATHB12    <---------DOF5.7(2)      --------->MYB59<---------ARR11(3)    ------->TEIL   <---------TOE2(3)<----------DOF2    <---------TOE2(3)  ----------->GT1   gacatgtatgttcgattggttaaggttgtagataacggttttttggtgttgtagaattaggttatagtttaagattttgttatattttttgcaaaatttt  21828500              <---------ARR11(3)               <---------AHL20(2)              --------->ARR11(3)              --------->AHL20(2)           <---------AHL20(2)              --------->AHL20(2)             <---------YAB1              <---------YAB1              <---------AHL20(2)            --------->AHL20(2)         --------->AHL20(2)              --------->AHL20(1)          --------->AHL20(1)          --------->AHL20(2)       ------              <---------AHL20(1)         --------->YAB1               <---------AHL20(1)       <-----             --------->AHL20(2)          --------->AHL20(2)           <---------AHL20(2)       <-----       ----------->GT1                  <---------AHL20(2)      ----------->GT1               -------   --------->ATHB12               ----------->GT1               --------->TOE1(1)    ----------->GT1  --------->ICU4              <---------AHL20(2)     --------->ARR11(3)<---------AHL20(2) --------->ICU4   cgaaatgatttgtaaatatattagtttttttttatattgtaaataatattatatagttcttctacctcgtaaattattttttttatggtgtaatttttcg  21828600                     <---------ARR11(3)                     --------->AHL20(2)                     --------->ARR11(3)                     --------->AHL20(1)                     <---------AHL20(1)                     <---------AHL20(2)                    <---------------AGL15                    =================================================================================                  --------->AHL20(2)                 --------->AHL20(2)                       ------->TEIL                 <---------AHL20(2)                    <---------ANAC55(2)                   <-------             --------->AHL20(2)                        --------->ANAC46                     ---------             <---------AHL20(2)                        <---------ANAC58                 --------->AHL20(1)             --------->AHL20(1)                        <---------ANAC58                 <---------AHL20(1)             <---------AHL20(1)                        --------->ANAC55(2)              <---------AHL20(2)         --------->AHL20(2)                           --------------->AtSPL8            --------->AHL20(2)        --------->AHL20(2) <---------TOE2(3)     <---------AHL20(2)                    --------->AHL20(2)        <---------AHL20(2) <---------ANAC55(2)   --------->AHL20(2)              ----------->GT1 --->ANAC55(2)  <---------AHL20(2)              --------->YAB1                  --------->DAG2 ----ANAC58 --------->AHL20(2)            --------->ARR11(3)      <---------AHL20(2)   <---------AHL20(2) ----ANAC58 <---------AHL20(2)            <---------ARR11(3)     --------->AHL20(2)--------->AHL20(2) -------->AtSPL8--------->AHL20(2)  ----------->GT1   --------------->AtSPL3   ---------->DOF2   taacttctaaataaataaattaatatattaagtatagcatgtaaaatctatattaatacgtaccatattatatagatgtctaaaagtaaataaattttat  21828700                        <---------YAB1                      --------->YAB1                      --------->AHL20(2)                                                            -                     <---------YAB1                                                                 -                     --------->ICU4                                                                 -                   --------->YAB1                                                              <-----                  <---------YAB1                                                               ------                  --------->AHL20(2)                                                           <-----                  <---------AHL20(2)              --------->ZAT18                            <-------                 --------->AHL20(1)              <---------ANAC58                            <-------                 <---------AHL20(1)              --------->ALFIN1                            <-------          --------------->AGL15                  <---------ANAC58                           <--------          =========================================================================================== ----------->GT1 --------->AHL20(2)            <---------ANAC58                             <<<<<<<<<E2Fd =========================MADS_MADS            <---------ANAC58     <---------AHL20(2)      <<<<<<<<<E2Fc --AHL20(2)     --------->YAB1                 <---------ANAC46     --------->AHL20(2)<----------DOF2 >AHL20(2)--------->TOE2(3)    ------->TEIL<----------DOF2      ----------->TBP     ---------->ID1 --   gcatagataataccataaatataattataaatgtatatgttatttctttgtgtgtgccatactgctatatataaatttttggatttgtctttttggcggg  21828800      --------->ALFIN1  ------->GAMYB ----------------->AG ----------------->AGL1 <-----------------AGL1 ------->P ----->MYB46(1) ----->MYB83 -NtERF2                                        <---------ZAT18 >NtERF2                                        <---------ZAT14 ------TCP11(1)                              <---------ANAC55(2) --ANAC58                                    <---------ANAC46 --ANAC46                       <-----------RAV1(1) <---------DAG2 --ANAC58            ----------->HVH21     <---------ZAT14 -LBD16      <------NtERF2   <---------ARR14(2) --------->ZAT18            --------->ATHB51 ==================MADS_MADS --------->ARR14(2) --------->ZAT14   <---------GLK1(2)  ----------->GT1 ------->MYB52(1)  <---------ANAC46<---------ANAC46 <----------DOF2       <---------MYB52(1)     <---   ccaaccgaatggggcagcatgatgtgaacgggatttgttgtggagttaagtgaactttatgcaacttggaatctccattattcgctctggtaaaaagatt  21828900                                                                                                    <                                                                                                    -                                                                                                   <x                                                                                                   --                                                                                                  <xx                                                                                                 <xxx                                                                                                <xxxx                                                                                               <xxxxx                                                                                               <xxxxx                                                                                               <xxxxx                                                                                             <xxxxxxx                                                                                             <xxxxxxx                                                                                             xxxxxxxx                                                                                             <xxxxxxx                                                                                             <xxxxxxx                                                                                             <xxxxxxx                                                                                             <xxxxxxx                                                                                             <xxxxxxx                                                                                             <xxxxxxx                             --------->CCA1(2)                                               <xxxxxxx                             --------->GLK1(1)                                               <xxxxxxx                 --------->ARR11(3)                                                          <-------        ----------->GT1     --------->ARR11(3)                                          --------->ARR14(2)       --------->DAG2       <---------ARR11(3)      --------->ANAC58                    <---------ARR14(2)      ---------->DOF2 --------->YAB1                --------->ANAC58                   <------ZmHOX2a(1) --------GT1     <---------ARR11(3)   ---------->DOF2      --------->AHL20(2)   --------->AHL20(2)<xx   aactatagaaaagttataagataataagaagatatcaatacaaagtactgaggcaagacaaaaaaatgaacgatgtcgcaaaaaaaataggaacctgtca  21829000                 ------>NtERF2                --------->LBD16               <---------LBD16             ------>MYB46(1)             -------->P             --------->ANAC46             ------>MYB83           --------->AtMYB61           <---------ALFIN1       ----------->HVH21      --------->SPL7     --------->ALFIN1    <---------SPL7--------->ZAT2    <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <---------ANAC58   --------->DEAR3(1)   <---------ANAC46   <---------ANAC58 xxxxxxxxxxxxxxxxsmallRNA(s) -------->DEAR3(1)<---------ZAT2 xxxxxxxxxxxxxxxsmallRNA(s) ------->DEAR3(2)--------->LBD16 xxxxxxxxxxxxxxsmallRNA(i)                                   <---------ARR14(2) xxxxxxxxxxxxxsmallRNA(s)                                <---------LBD16 xxxxxxxxxxxxsmallRNA(s)                              <---------At4g35610 xxxxxxxxxxxsmallRNA(i)                               <xxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxsmallRNA(se3)                             <---------ZAT14 xxxxxxxxxxxsmallRNA(s)                      ==================================HOX2a_HOX2a        <xx xxxxxxxxxxxxsmallRNA(le3)                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                 <xxxx xxxxxxxxsmallRNA(si3)                       <------ZmHOX2a(2)       --------->LBD16         -------- xxxxxxxx>smallRNA(i)                       --------->ARR14(2)      <---------TOE1(1)   --------->WOX13(1) xxxxxxxxsmallRNA(le3)                      <---------ARR14(2)     --------->SPL7     <---------MYB52(1) xxxxxxxxxsmallRNA(s)  <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->ARR14(2)       <xxxxxxxxxxxxxx xxxxxxxxxxxsmallRNA(fl3)                   --------->ARR11(3)  <---------ANAC58      <------NtERF2xx xxxxxxxxxxxxxxxxsmallRNA(se3)              <---------ARR11(3)  <---------ANAC58     <---------RAP2.6(3) xxxxxxxxxxsmallRNA(se3)                   ------->GAMYB--------->MYB52(1)    --------->YAB1 -------- xxxxxxxxxxxxxsmallRNA(si3)             --------->MYB52(1) --------->LBD16   <<<<<<<<<ARR2 --------->YAB1 xxxxxxxxxxxxxsmallRNA(se3)             <-----------GT1<---------ALFIN1 <------ZmHOX2a(1)<xxxxxxxxxxx xxxxxxxxxxsmallRNA(si3)          <xxxxxxxxxxxxxxxxsmallRNA(s) <-------TEIL  <<<<<<<<<ARR1<---------ATHB12 ----HVH21--------->MYB46(3)     --------->ZAT2     --------->ANAC46<---------TOE2(1)<-----------HVH21 xxxxxxxxxxxxxxsmallRNA(s)       <---------ZAT2 ------>ZmHOX2a(1)<-----------HVH21  --------->RAP2.6(2)   gaccgccgtgcgaccaccccggctagggtaaaccgagccgagtaacgatcctctacagcaccggatgcgtccgaggacaatcgtagccgtcaatcacgct  21829100                <xxxxxxxxxxxxxxxxsmallRNA(fl3)              <xxxxxxxxxxxxxxxxsmallRNA(i)        <-----------HVH21       <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                             ------>ZmHOX2a(1)      --------->ANAC58                                                                 ------>ZmHOX2a(2)      --------->ANAC58                                                                <------ZmHOX2a(2)     --------->SPL7      xxxxxxxxxxxxxxxx>smallRNA(i)                                 --------->GLK1(2)    <---------ALFIN1  -------->P                                                     <---------ARR11(3)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                              --------->AGP1   <---------SPL7    --------->WOX13(1)                             <-------TEIL     <---------GLK1(2)  <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                              <---------SPL7     <---------ARR14(2)  --------->DEAR3(1)--------->MYB46(3)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxsmallRNA(i2)                          <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         -- xxxxxxxxxxxxxxxxxxsmallRNA(si3)                        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    ------ ->ANAC58 <xxxxxxxxxxxxxxxxsmallRNA(s)            --------->GLK1(1)--------->CCA1(2) --------->ARR14(2) xsmallRNA(fl3) <-------TEIL            <---------CCA1(2) <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  ------ xxxxxxxxxxxxxxxxxx>smallRNA(le3)   <---------ANAC58   --------->ANAC58            ----------->ARR10 ->ANAC58--------->WRKY18(1)        <---------ANAC58   --------->ANAC58      <xxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxsmallRNA(fl3)  xxxxxxxxxxxxxxxx>smallRNA(s)  <---------TOE2(3)------->TEIL --------->ARR11(3)   ctagccgcacggtcatggttcatcaaccagggtttagggcctgtctcttgagaaatcaaggaaacagaggtacgagcctatagaacagatcctgttcaag  21829200                                                                          ----------->GT1                                                                     <---------PCF2                                                                    <----------ID1                                                                  --------->ALFIN1                                                                --------->ALFIN1                                         ----------->RAV1(1)    =====================================        <---------YAB1                --------->LBD16           ===================bZIP_DOF     ----------->HVH21               <---------LBD16            --------->O2   <---------ANAC58               --------->ARR14(2)            <---------ANAC46      --------->ARR11(3)   <---------ANAC58               <---------ARR14(2)            <---------O2          <---------ARR11(3) ------->MYB59                   <---------GLK1(1)              <---------TGA1a  <---------AHL20(2) --->ANAC58     --------->At4g35610  --------->ANAC46    ---------->DOF2---------->DOF2<------ZmHOX2a(2) --->ANAC58     <---------At4g35610 <---------LBD16      =================bZIP_DOF---------->DOF2----   taaggtcgtgaccattgctgctctctcaatgttatatatccggcaacattgtttttcaaaatagcgatgtgggacaaagttatataaagatcacattaga  21829300            <---------ANAC58            <---------ANAC46            <---------ANAC58               <---------YAB1     <---------AtLEC2                    --------->YAB1    <<<<<<<<<<FUS3                       <---------ICU4                           --------->YAB1    >>>>>>>>>>ABI3                      --------->ICU4                            <--------HAHB4    >>>>>>>>>>FUS3                   --------->AHL20(2) <---------ALFIN1         <---------YAB1 ----- =======bZIP_DOF                 <---------ALFIN1---------->DOF2               --------->YAB1  <----- ------>DOF2----------->GT1   --------->PCF2--------->YAB1           <---------ANAC46       ---------   aaagcatgcatgggtcgtgatatatggactaaggcccacttaattatcatataaagcccctccctaaattagcgttgaaaattatcattaagtcaatatg  21829400  Previous    Next  AGI:  At5g53740.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G53905.1) Range:  from: 21828859    to: 21832134    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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