Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                            <-----------GT1                                   --------->LBD16  <-----                           --------->AHL20(2)                                ========================                     ----------->GT1                                         <---------------AGL15                    --------->DAG2                                --------->ANAC46             ------                   ---------->DOF2                                --------->ANAC58             ------              <---------------AGL15                               --------->ANAC58---------->DOF2              --------------->AGL15              <---------AHL20(2)          --------------->AGL15 -------DOF2  ===============================================================================MADS_MADS ------AtSPL8--------->ANAC46                    --------->AHL20(2)  <-----------GT1  <---------GLK1(2)   tttgtaagtttgtatacacaataaagtaataaactagtctctcaattctatttaaaaatccatgtcccaagtaacttctccccaaaaagaaactcaatat  21776200                                  <---------RVE1(1)                                  <---------CCA1(1)                                 <---------ARR11(3)          <---------WRKY12       --------->ARR11(3)        <-----------HVH21        <---------ARR14(2)       <----------ID1       --------->LBD16               ------------>MYB.PH3(1)       ----------->GT1     <---------HSFC1(1)         --------->AHL20(2)      --------->MYB59      --------->HSFB2a(2)   ----------->GT1                                    -      <---------TOE2(3)    <---------HSFB2a(2)   <---------ZAT6                                    <- ----ARR11(3)        <---------AHL20(2)        ----------->GT1--------->At5g28300                  <- ----AHL20(1)        --------->AHL20(2) ----------------->AGL1<-------GAMYB                 --------- =========================================================MADS_MADS                       ---------->DOF2 --->AHL20(1)       --------->AHL20(2)  ----------------->AG ----------->GT1      <-----------GT1---- --->AHL20(2)       <---------AHL20(2)  =============================================================   tttagaataaggtcaaatggaattaaattccagaagatatttgccaaaatagtgataaaaatacggttaaattggtatatgtttttactgacaaaaggca  21776300                                                                                                  <--                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                                 ====                                                                                                 <---                                                                                                 <---                        <----------DOF2                                                          ----               --------->ARR11(3)                                                                ----             <---------TOE2(3)                                                                   ----             <---------TOE1(3)                                                                   <---          <---------AHL20(2)                                                                     ----      --------------->AGL15                                                                      ---- -------->GLK1(2)    <-----------GT1                                                             ---- --------ARR11(3) <---------AHL20(2)                                                            <---- --------GLK1(2) --------->AHL20(2)   --------->At4g35610   <---------DAG2                     <----- >DAG2<---------------AGL15 <----------DOF2                 ========================================= ------->ARR10 <---------ARR11(3) --------->ARR14(2)        <----------DOF2                 --------- =====================MADS_MADS  <---------GLK1(1)    <------ZmHOX2a(2) <---------MYB52(1)  <--------   agattcttctattttaagatttatttctttctttgaaatctgctaaacgttgttagatcacactttatgtgtctgtttttttttttgtcaattcagcaca  21776400  --------->ICU4 ---------TGA1 ---------HVH21 ----->ANAC46                 --------->WRKY38(1) ----->ANAC58                 --------->WRKY12 ==========================bZIP_DOF ------O2                     --------->WRKY45 ------TGA1a                 --------->ALFIN1 ----->bZIP60(2)            ------->MYC3 ----->TGA1a                <-------MYC3 ----->O2                ------>MYB83 ------ANAC55(2)         ------>MYB46(1)--------->AHL20(2) ----->ANAC55(2)         --------->MYB52(1) ----->ANAC55(1)        --------->MYB55(1) ----->ANAC58          --------->MYB46(3)                             <---------AHL20(2) -------STF1           <---------MYB59  <---------AHL20(2)           --------->AHL20(2) ----ALFIN1            <---------MYB111(1) --------->ARR11(3)        <---------AHL20(2) ======bZIP_DOF        <---------MYB46(2)  <---------ARR11(3)    ------>MYB83 >At4g35610           ----------------->AGL1                     ------>MYB46(1) -At4g35610     ---------->DOF2   <---------MYB59----------------->AGL3              ---------->DOF2   cgtcatatttgtatttttcaaagtaccaaacgtggaccaaaataaaatctcgtcaaaaatggaaaccaaattttaatttgatttgcacaaagcccaattt  21776500                                                                              --------->ANAC55(2)                                                                              <---------ANAC46                                                                              <---------ANAC58                                                                              <---------ANAC58                                  -------->P                                  <---------ANAC55(2)                        >>>>>>>>>>WRKY26                                  <---------HSFC1(2)                        >>>>>>>>>>WRKY38                                 --------->MYB52(2)                        >>>>>>>>>>WRKY43<---------ZAT2                   ----------->ARR10                   <---------ALFIN1  ----------->RAV1(2)       --------->RVE1(1)            ---------->DOF2   <-----------ARR10         --------->ANAC58 --------->MYB111(1) *TSS      ---------->DOF2   <---------WRKY18(1)             --------->ANAC58<--------P          <--------   gatttgtttaaagtcaaagcccaacttgaccaaaactacccctgctcatccaaaccctaagcaaaatatcgagggtagtttcgtattttgtttatattga  21776600                                                                             --------->ARR14(2)                                                                             --------->GLK1(2)                    --------->TOE2(3)                  <---------LBD16       <---------ARR14(2)                 <---------ARR14(2)                 --------->ZAT2           ------->TEIL      ------                 --------->ARR14(2)                 <---------ZAT2   --------->HSFB2a(1)      <------ZmHOX2a(2)                <------ZmHOX2a(1)            <---------GLK1(1)       <---------HSFC1(2)      --------          <------MYB46(1)                    --------->GLK1(1)       --------->HSFC1(2)      <-------          <------MYB83                  --------->At4g35610          <---------HSFB2a(1)     <-------         --------->MYB46(2)             <---------At4g35610 <---------At4g35610       ----------->GT1         --------->MYB111(2)         <---------At4g35610    --------->At4g35610   ---------->DOF2    --------->AHL20(2)          <---------ANAC58    --------->At4g35610   <---------YAB1     -------- ----CBF --------->MYB111(1)    <---------ANAC58    <---------At4g35610--------->GLK1(2) ---------->DOF2   acacaattaagtaggtgaggaacctctatttcttccgtcttctgctgatttctgagcttcggagctatcgaaaattctgaatctgaaagggtaaagatcc  21776700          ---------->DOF2                                 <---------ICU4 <----------DOF2                                          --------->ATHB12 >ZmHOX2a(2)                                  <---------ICU4 ->ARR14(2)                     --------->KAN4(2)      <---------At4g35610          --------->ZAT14 --ARR11(3)                    <----------TaMYB80     <---------YAB1         ------->TEIL       ----- --ARR14(2)              --------->ICU4      <---------YAB1                 <---------CCA1(2)  <----- ->ARR11(3)        --------->DAG2          --------->YAB1<---------YAB1------->TEIL <---------ZAT14   catctttttccaaaaatcgataagggaattagtatattcgttcattcatcatcgttctgatgatttcgatttgaatctgtatctagtactctgtattatc  21776800                                                                   --------->HSFC1(2)                                                                   <---------HSFC1(2)                                                                   --------->HSFB2a(1)                                                                   <---------HSFB2a(1)                                                                   <------MYB83                                                                   <------MYB46(1)                                                              ------>ZmHOX2a(2)                                                             <------ZmHOX2a(2)      --------->ATHB12                                      --------->ARR14(2)     <---------YAB1                               <---------ARR11(3) ---->YAB1                                        --------->ARR11(3)                              --- ----YAB1       <----------DOF2            <---------ANAC46 <---------ARR14(2)             ----------   agaaattttgattagtagctttgatgtgttcttgttttgcagtttgagtgaagatgtcttcagatcggaaggttctaagttttgaagaagtttcaaagca  21776900                                           <------ZmHOX2a(2)                                          <---------ARR11(3)                                          --------->ARR11(3)                                          --------->ARR14(2)                                          <---------ARR14(2)                                          <---------AGP1                       <---------YAB1     --------->AGP1                   <---------ANAC46      <---------CCA1(2)                   <---------ANAC58     ----------->ARR10             <---------MYB46(3)--------->LBD16          <------ZmHOX2a(1)    ------>NtERF2                                                      ---        <---------TOE2(3)     <---------LBD16   <---------CCA1(2)                                 ---        <---------TOE1(3)     <---------ETT(1)  ---------->ID1   <---------ARR11(3)              ---- -------->RAV1(1)  <---------ANAC58 ----------->GT1 <----------DOF2     <---------MYB52(1)       ---- >DOF2 --------->MYB52(1)    <---------LBD16------>ZmHOX2a(2)    --------->ARR11(3)------->TEIL  ----   caacaaaactaaggattgttggcttattatttccggcaaggttagatcttgtctctttgtttgagaacatctctgttttttgacgaacttagttctcttc  21777000    --------->ATHB12             <---------REM1(1) --->NtERF2<-----------HVH21 <---------TOE2(3)                <----------DOF2 ------>LBD16               ---------->DOF2       <---------At5g28300 ----->ANAC46    --------->HSFC1(2)              <-----------GT1 ----->ANAC58    <---------HSFC1(2)   <---------ZAT6<---------ZAT6              <---------TOE1(2) --- ----->ANAC58 ---------->DOF2<---------TOE1(3)<---------MYB46(3)                <---------TOE2(2) ---   cgccattgatttgtgtcaaagcttcgattttaaagttgtagagttggattgttactgttagaagctttaatcgagcccctcgtagatttagttgattcta  21777100  Previous    Next  AGI:  At5g53550.1    Description:  YSL3 (YELLOW STRIPE LIKE 3); oligopeptide transporter. Identical to Metal-nicotianamine transporter YSL3 (YSL3) [Arabidopsis Thaliana] (GB:Q2EF88;GB:Q0WVQ4;GB:Q9FJC8); similar to YSL2 (YELLOW STRIPE LIKE 2), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT5G24380.1); similar to YSL1 (YELLOW STRIPE LIKE 1), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT4G24120.1); similar to YSL7 (YELLOW STRIPE LIKE 7), oligopeptide transporter [Arabidopsis thaliana] (TAIR:AT1G65730.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77891.1); similar to YSL transporter 3 [Thlaspi caerulescens] (GB:ABD04075.1); similar to YSL transpo Range:  from: 21773264    to: 21776143    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g53560.1    Description:  ATB5-A (Cytochrome b5 A). Identical to Cytochrome b5 isoform 1 [Arabidopsis Thaliana] (GB:Q42342;GB:Q9SB05); similar to B5 #4 (cytochrome b5 family protein #4), heme binding / transition metal ion binding [Arabidopsis thaliana] (TAIR:AT2G32720.1); similar to Cytochrome b5 (GB:P40934); contains InterPro domain Cytochrome b5; (InterPro:IPR001199) Range:  from: 21776593    to: 21777804    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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