Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->YAB1                                                                            <---------------AGL15                                                                            --------->YAB1        <----------DOF2                                                     --------------->AGL15        --------->TOE2(3)                                                 -------->P --------->GT1                                                       <---------ALFIN1 ------>DAG2                                                        ------>MYB46(1) ----->DOF2                            --------->ANAC58             ------>MYB83 -------AGL15                          --------->ANAC58             -------->P<---------YAB1 ------>AGL15                --------->MYB52(1)                    ----------->RAV1(1)            --- ------->AGL3    <---------ICU4 ------->GAMYB                     --------->AtMYB61              <--- --------AGL1   --------->ICU4 --------->ANAC46                  --------->MYB46(3)       <-------TEIL   aaggtataaactttagtaacaattacagaaacaacgacactaagcaaataagagaaattttgttgaaaccaacacttaccatgataagaagattcaattc  21765400                                                                                         <------MYB83                                                                                         <------MYB46(1)  --------->YAB1                            <----------ID1                              --------->MYB59 <------ZmHOX2a(2)              --------->GLK1(2)                                       <---------AtMYB61 ------>LBD16      <---------ZAT14    --------->MYB46(3)                         ---------->DOF2 ------HSFB2a(2)   --------->ZAT14  ----------->RAV1(1)                     ----------->RAV1(1)   ccgatcacaaaaaaaaaactgttcagagcataagaatccaacaaatgagacaaaattagtggcattttcaacttgaaacaccagaaaggtttggtttcta  21765500                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                            ---------                   <------ZmHOX2a(1)             --------->AtLEC2                           ---------    --------->At4g35610                 --------->TOE2(3)                           ------>MYB83 <---    <---------At4g35610           --------->TOE1(3)   --------->DAG2                ------>MYB46(1)   <---------AGP1--------->MYB59  --------->TOE2(3)  ---------->DOF2              <---------MYB59<---   agctagagctgattcaaattaggaaacagagataaaccctaatctcaattcatgaaaaagtaatcaaacaaacaccagagaagaccaaatcaaatggtaa  21765600                                          <------ZmHOX2a(2)                                          --------->CCA1(2)                                         <---------ARR11(3)                                         --------->ARR14(2)                                 <--------                                         --------->AGP1                                     ---------                                         --------->ARR11(3)                            <----------DOF2 ----->HAHB4                             <---------ARR14(2)                         ------->TEIL<---- ------>ATHB12                          --------->GLK1(1)                         <---------ZAT18 ------ATHB1                           ----------->ARR10  <-------TEIL           <---------ANAC58 ----->ICU4                       ------>MYB83           --------->ARR14(1)      <---------ANAC58 >YAB1                            ------>MYB46(1)       <---------GLK1(2)       --------------->AtSPL8 -->GT1                           --------->MYB52(1)    --------->ARR11(1)      <---------------AtSPL8 ------ATHB12                   <---------MYB59---------->DOF2     --------->MYB46(3) <---------DAG2 ------YAB1                     --------->AtMYB61     ----------->ARR10    --------->ARR11(3) -------   tgattcaacgatgagaaaccagacttgatagagaccaaactgagatccacaaagtttagattcgaatgaacaactaagaaattgtgtacctttctgtagt  21765700                                                                      <------MYB83                                                                      <------MYB46(1)                                                                      <---------ANAC58                                                                      <---------ANAC58                                                                     --------->MYB59                                                                   <---------MYB52(1)                                                                  <---------ZAT2                                                                  <-------GAMYB                                                                  >>>>>>>>>TAC1                                                             <---------YAB1                                                          --------->GLK1(2)                                                         <---------GLK1(2)                                                         --------->ARR11(3)                                                         --------->ARR14(2)                                                         <---------ARR14(2)                                                        --------->HSFC1(2)                    -------      ----------->GT1                                   <---------HSFC1(2)                    ------- -ZAT14                               --------->GLK1(2) --------->HSFB2a(1)            ------->GAMYB >ZAT14                           >>>>>>>>>TBF1         <---------HSFB2a(1)<---------HSFB2a(2)<------ -----ZAT6                 --------->CCA1(2)           ----------->ARR10   --------->HSFB2a(2)------- ---->GT1                 <----------ID1   <------ZmHOX2a(2) ----------->HVH21    <------ZmHOX2a(2)   gaaatcaagggtttatttcaatcggagagagacgaagaagaatcgatcaaatcgacgaagattctgacagttgggttcgagacgatcaacagagtcacga  21765800                                                        --------->MYB52(1)                                                   <---------YAB1                                                 --------->YAB1                                                <---------YAB1                                                <---------AHL20(2)                                            --------->YAB1   ---------->DOF2                          --------->AHL20(2) ---->GT1<----------DOF2                    <---------AHL20(2) ---------->DOF2      <---------------- -->ANAC58                                <-----------TBP    <------ZmHOX2a(2)  <------------CBF    - ---ANAC55(2)        *TSS           --------->ANAC58<---------------AtSPL8    <---------YAB1     ---- -->ANAC58    <----------DOF2       --------->ANAC58<---------------AtSPL3  <-----------GT1   <------ZmHOX2a(1)   aaaaaaaaagtcttttcttttgtatcaacttgatacacaagcccatttatattataagtaccgatcaaagcccagataataccattgacataaacaggaa  21765900             --------->TOE2(3)                                                     <---------AHL20(2)             --------->TOE1(3)                                                 ----------->GT1            ----------->RAV1(2)                                       --------->ARR14(2)           ------->TEIL                                        <---------DEAR3(2) <---------AHL20(2)           -------->P                                     <---------AtMYB61   --------->ICU4 -------TaNAC69(2)            <---------ANAC46   <-------TEIL <---------MYB46(3)  --------->AHL20(2) ---------->GT1          <---------ANAC58      --------->ARR14(2)     <---------ARR14(2) ----->MYB52(1)          <---------ANAC58      <---------ARR14(2)    ------>ZmHOX2a(1)          <----   aacggctaaaatcaacctgaactatttgcatgcggtgtttttatacccagattcaaatgtatggtcgtttcctatccgaagtgattaaatattcaaattc  21766000                                                                                                   --                                                                                                   <-              --------->ICU4                                                                     <---  --------->TOE2(3)                       --------->YAB1                          --------->ARR11(3)  --------->TOE1(3)--------->MYB59       <---------YAB1                           --------->ARR14(2) ----------->RAV1(2)<----------ID1     <----------DOF2                 <---------YAB1            <--- -------GT1<---------YAB1      <---------YAB1  <---------ZAT6 --------->ATHB12    <---------ARR14(2)<   acaacctgaacttatcaatattaggccaaaatcaacattgacttttatagtgttagtaaaccattgatttcttatgactaagcatatattgctacgatga  21766100                              --------->KAN4(2)                             <---------KAN4(1)        <---------LBD16      <---------ICU4  <---------ZAT6            <---------YAB1  ----------->GT1      <---------At4g35610 ------->ALFIN1        --------->At4g35610 --------AtMYB61      ------->TEIL                                                              ----- ------ANAC46 ----------->ARR10                                          ------>MYB83           ----- ------bZIP60(2)<---------ARR14(2)                                       ------>MYB46(1)      >>>>>>> ---------ANAC46--------->ARR14(2)             <----------DOF2 <---------ANAC46       <---------At4g35610   tgtggtgttatacgggctgatttgcatctgattattcccaaatttgaagctttaaaaactcattttcgtaaaaccaaatttgaatttcatcagagtaaca  21766200            <------ZmHOX2a(2)           <---------ARR14(2)       <---------ANAC58       <---------ANAC58   ----------->GT1 <---------ARR11(3)     ---------->DOF2                           <---------ANAC58 --------->ARR11(3)----------->GT1                   <---------TOE1(2)                             <- ---->TOE2(2)     --------->ALFIN1            <---------TOE1(3)   <---------ANAC58   <---------AHL20(2) ---->TOE1(2)------>ZmHOX2a(2)                <---------TOE2(3) <---------YAB1 <-----------GT1<------ >>MYB98   --------->ARR14(2)     <---------GLK1(2) <-----------RAV1(2)<-----------GT1        -------   taagaacttgctggatccgagtggtcaaaagtgaaatattctcgtcttgaggttgcaggtttgaatatgcttgttacaattttacatttttttggagatt  21766300  Previous    Next  AGI:  At5g53530.1    Description:  vacuolar protein sorting-associated protein 26, putative / VPS26, putative. similar to vacuolar protein sorting-associated protein 26, putative / VPS26, putative [Arabidopsis thaliana] (TAIR:AT4G27690.1); similar to unknown [Populus trichocarpa] (GB:ABK94113.1); contains InterPro domain Vacuolar protein sorting-associated protein 26; (InterPro:IPR005377) Range:  from: 21763261    to: 21765821    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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