Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <-----------GT1       <---------ICU4                                                         --------->AHL20(1)      --------->ICU4                                     <---------------------WRI1  ----------->RAV1(1)                        <---------AHL20(2)               --------->ARR11(3) <--- --------->ANAC58                           <---------ARR11(3)                <---------AHL20(1) ---- --------->ANAC46                           --------->AHL20(1)                <---------ARR11(3) ---- --------->ANAC58                           <---------AHL20(1)              <---------ARR11(3)  <---- -------->SPL7                              <---------AHL20(2)              --------->ARR11(3)  <---- -------SPL7                                --------->ARR11(3)              <---------AHL20(1)------- -----------AtSPL3             ====================================================================== -ANAC55(2)         --------->AHL20(2)      --------->AHL20(2)--------->YAB1--------->AHL20(1)<------ >ANAC58          <---------GLK1(2)  --------->YAB1    --------->ZAT18   >>>>>>>>>>GT-3b  --------->AHL20(2) >ANAC58        --------->LBD16--------------->AGL15   <---------ZAT18----------->GT1 <----------DOF2 >ANAC46  <---------ICU4       <---------------AGL15  <---------ZAT6---------->DOF2   <---------DAG2 >ANAC55(2) --------->ANAC46   <----------DOF2 <---------AHL20(2)--------->YAB1  <-----------GT1=====   tgtacgacataatcactccagattatatcaattctttaatcagaaatatatttttagtgtgcaaaaatcataaagaaaaatattttccctttttatatat  21730200                                                                       --------->ICU4   ----------->GT1                                                  --------->ICU4 ------AHL20(1)                                           <---------ZAT14   ----------->GT1 ----->ARR11(3)                                           --------->ZAT14 <---------WOX13(1) ----->AHL20(1)                                         --------->ANAC46--------->ATHB12 -----------AGL15  <-----------GT1                   <-------TEIL   <---------ATHB51 -----AHL20(2)<---------RVE1(1)                    <---------ARR14(2)  <---------YAB1 -->AHL20(2) --------->ARR11(3)            --------->AHL20(2)--------->MYB46(3)          --------->YAB1 ===========MADS_MADS      <---------TOE2(3)       --------->ARR14(2)<---------ICU4     ============= ---AHL20(2) <---------GLK1(2)    <---------AHL20(2)--------->CCA1(2)--------->YAB1     ------------- ====================================================================================================   atattgggtaattcagatttttttctatttatgtttttatttgaaaaaaataagatacactgaacaaacaattatgattggaaacaaattttcatattta  21730300                                                --------------->AGL15                                                ------>ZmHOX2a(1)                                                <---------------AGL15                                               ----------------->AGL3                                               <-----------------AGL3            --------->ANAC46                                             <-----------GT1                 --------->CCA1(2)                         ----------->GT1<---------CCA1(1)                   <---------ARR14(2)            <----------DOF2             <---------RVE1(1)           <---------AHL20(1)      <-----------GT1   --------->MYB59<---------AHL20(1)           --------->AHL20(1)      --------- --------->ARR11(3) --------->ATHB12   --------->ARR11(3)        <---------AHL20(2)--------->ZAT14 <---------ARR11(3)<---------YAB1      --------->AHL20(1)        --------->AHL20(2)<---------ZAT14 ===============================================================MADS_MADS   --------->ARR14(2) ---->AGL3  <---------DAG2         ---------->DOF2              --------->YAB1<-------TEIL  <-------- =====MADS_MADS    <---------AHL20(2)  <---------ARR11(3)   <---------YAB1 <------ZmHOX2a(1)---------   gaagatttatacaacttttttttaattgggtaattttaaaagatattttcctatatatagtttttataaaaatattaggatacactgaacaaaacctaaa  21730400                                                                                                    <                                                                                                -----                                                                                                -----                 --------->AHL20(2)                                                             <----      <---------------AtSPL8                             --------->ANAC55(2)                  -------      --------------->AtSPL8                           <-----------GT1                      <-------- >TOE1(3)       <---------AHL20(1)            --------->AHL20(2)                            --------- -MYB59         --------->AHL20(1)            <---------AHL20(2)                    <---------AHL20(2) >TOE2(3)      --------->AHL20(2)            --------->AHL20(2)                    <---------AHL20(2)   tatacaattgagtacaaatatatataagtttggaaaacaatttcaaaattaatagatttacataatttgtgttcaaaacagtttttttatttgtttatat  21730500     <------MYB46(1)     ----------->GT1     <------MYB83             ---------->DOF2 ---------AHL20(2)           <---------AHL20(2) ---->AHL20(2)          <---------AHL20(2) ------>TBP            --------->AHL20(2) -----AHL20(2)         <---------AHL20(1) ---->TBP              <---------AHL20(2)          <-----------ARR10                        *TSS ---TBP             --------->YAB1                 --------->ARR14(2)             <----------DOF2 >AHL20(2)       --------->YAB1    <-------TEIL   <---------GLK1(2)               <---------DAG2   aaatatttggttaaaagtttaataataaaatttaaagtccatcttcacatccgattcttctcttctcttctctctctctcttccctttttcgctggaact  21730600                                                                                                -----                                                                                               ------                                                                                              -------                                                                                             <------NtERF2                                                                                            <--------                                                                                            ---------                                                                                            ------>NtERF2                                                                                           <---------ATERF1(2)                                                                                           --------->RRTF1(2)                                                                                           --------->DEAR3(1)                                                                                           --------->ATERF1(2)                                                                                           <---------DEAR3(1)                                                                                           --------->RAP2.6(2)                                                                                           --------->RRTF1(3)                                                                                           --------->RAP2.3(3)                                                                                           --------->RAP2.3(2)                                                                                          --------->ERF1                                                                                          --------->ORA47(2)                                                                                          --------->RAP2.3(1)                                                                                          --------->RRTF1(1)                                                                                          <------NtERF2                                                                                          --------->DEAR4(2)                                                                                          --------->ATERF1(1)                                                                                          --------->RAP2.6(1)                                                                                         --------->ATERF1(1)                                                                                         <---------RAP2.3(1)                                                                                         --------->DREB2C(1)                                                                                         <---------DREB2C(1)                                                                                         <---------DEAR4(2)                                                                                         <---------ATERF1(1)                                                                                         ------>NtERF2                                                                                         --------->At4g35610                                                                                         <---------At4g35610                                                                                        <---------DEAR3(1)                                                                                        --------->DEAR3(1)                                                                                        <---------ATERF1(2)                                                                                        --------->RAP2.6(2)                                                                                        --------->ATERF1(2)                                                                                        --------->RAP2.3(2)                                                                                       --------->ATERF1(1)                                                                                   --------->SPL7 <--                                                                          <----------DOF2<------NtERF2                                                                    --------->ARR14(2) --------->RAP2.3(1)                                                                   <---------GLK1(1)  <---------ATERF1(1)                                                                   --------->GLK1(1) <---------SPL7--                                                                  --------->ARR14(2)------>ZmHOX2a(2)                                                               <------NtERF2       <------ZmHOX2a(2)                                                              <---------LBD16     <---------ARR14(2)                                                        --------->ZAT14   <---------DAG2<---------ATERF1(1)                                      <----------DOF2------>ZmHOX2a(1)  --------->LBD16--------->SPL7                                 --------->HSFB2a(2) =====================================HOX2a_HOX2a    <-----------GT1            ----------->RAV1(2)---------->ID1--------->LBD16   --------->ARR14(2)   gatttttttcttctctctctctctctctcttccttctgggcttctagggtttgtcctctccagtccccgatttccgctttatccgatcggccgccgccga  21730700       <-----------GT1   <---------TOE1(2)                            <-------TEIL --------->YAB1 ------>ARR10                                  <------ZmHOX2a(2) >NtERF2                                      <---------ARR14(2) -->DEAR3(1)                                  --------->ARR14(2)                        <-----------GT1 -ATERF1(1)                                   --------->ARR11(3)               <----------DOF2 >ABI4(1)                                     <---------ARR11(3)         --------->ARR14(2) ========= -------GLK1(2)                               --------->AGP1<-------TEIL <---------ARR14(2) ------>ZmHOX2a(1) ------->GLK1(2)                  <----------DOF2         <---------GLK1(2)    <---------DAG2   gattctaggttacccttcttcacttcatctattcaactttctccctaagatccatcttcagattcatcacttcccaattcgctttttttttttcctgatt  21730800                                                                                         <---------DAG2                                                                                         <----------DOF2                --------->YAB1                                                          <---------ANAC58               <---------ATHB12                           --------->ATHB12              <---------ANAC58             --------->WOX13(1)               --------->ZAT18                       --------->CCA1(2)       <-------TEIL                           <---------ZAT14                      --------->ARR14(2) ------>ZmHOX2a(2)            <----------DOF2 --------->ZAT14                <---------At4g35610 =======HOX2a_HOX2a           --------->TOE2(3)          <---------YAB1      --------->At4g35610   cgatctcgattcgttcaatcatccatttccaactttagtttcgatttgttcactgttttatgatttgaactcgttcgtaatctgagatttgcttttcgat  21730900                                                                                                <----                                                                                              <------                                          --------->At4g35610                                ------>ZmHOX2a(2)                                       <<<<<<<<<<WRKY43                                     <------ZmHOX2a(2)                                       <<<<<<<<<<WRKY38                                    <---------ARR14(2)                                     <------MYB46(1)                                       <---------AGP1                                     <------MYB83              <---------ANAC55(1)         --------->ARR14(2)                        <-----------GT1<<<<<<<<<<WRKY26        <---------ANAC58           <---------CCA1(2)                 ---------->ID1     --------->MYB59            <---------ANAC46   <---------ANAC58           --------->ATHB12     --------->ATHB12 <-----------GT1                  <---------ANAC46          <-------TEIL  <---------AHL20(2)<---------At4g35610  <---------ANAC58   <---------ANAC58   tttttagttagattcatttgttctattaacttgttgatttggtcatcttagtaactagtttgatttcgtgttttatattcgatttcgtgctcggatctgt  21731000                                                     <----------DOF2                                                 ------->PIF5                                                 <-------PIF5                                                 <-------MYC2                                                 ------->MYC2                                                 <-------MYC3                                                 ------->MYC3           <---------YAB1                     <---------ANAC58       <-------GAMYB ----------->HVH21        <---------ANAC58      <---------MYB46(3)  >>>>>>>>>TAC1       <---------ANAC46                            --------->YAB1 -----MYB52(1)     <---------At4g35610  <---------WRKY12   ------>ZmHOX2a(2)             <-------TEIL -----RAV1(1)     ------->TEIL        <-----------HVH21  --------->ARR11(3)        <-----------GT1   tgttctggctgttatagttgaatctgacagtgtttttaagcgtcaatggctcgtgctttgatctcttattgctattacatggttttttcgattcatagtg  21731100  Previous    Next  AGI:  At5g53480.1    Description:  importin beta-2, putative. similar to protein transporter [Arabidopsis thaliana] (TAIR:AT2G16950.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO48630.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ58655.1); similar to hypothetical protein OsI_037531 [Oryza sativa (indica cultivar-group)] (GB:EAY83572.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain HEAT (InterPro:IPR000357); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989); contains InterPro domain Importin-beta, N-terminal; (InterPro:IPR001494) Range:  from: 21730592    to: 21735008    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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