Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->ARR11(3)                <---------------AGL15                       <---------ARR11(3)                --------------->AGL15                       --------->AHL20(1)             <-----------GT1                               --------->RVE1(1)                     ----     --------->YAB1                                        --------->CCA1(1)                     <---     ----------->GT1                    --------->YAB1 --------->AHL20(2)     <---------AHL20(2) ---- <---------AHL20(2)           --------->YAB1  <---------AHL20(2)        <----------DOF2      <------- <---------YAB1 <---------ALFIN1<---------YAB1--------->AHL20(2)     <------ZmHOX2a(1)      ---------   gtttttattgtaattttaccacttctagccatttataaatattcaaaattaaaaaaaaaaaatatcttgtaggactttattttttttggagttttaaagt  21690400                                <---------AHL20(2)               <---------ANAC58  --------->YAB1                --------->AHL20(1)         <---------TOE2(3) ----->ZAT18                    <---------AHL20(1)        <-----------GT1 ------ZAT14                 <---------AHL20(2)          <-----------GT1 ----->ZAT14                 --------->AHL20(2)   <---------AHL20(2)          ----------->GT1 --TOE2(3)              --------->ICU4            --------->AHL20(2)       <---------ATHB12 ->DOF2   <-----------GT1   --------->AHL20(2)<---------YAB1     <---------ANAC58               <----   tcactgataatttaaccaatttagccaaaattaaaatatttgaatgttttgataaatttttaacatttcgttttccaaacatgtaaatttgaaatcgata  21690500                                                     --------->AHL20(2)                                        <---------ORA47(2)                                        <---------DEAR3(2)                                        <------MYB46(1) --------->ICU4                      ---------                                        <------MYB83 <---------AHL20(2)                 ----------->RAV1(1)                                       <---------DEAR3(1)                       <---------ARR11(3)                            ---------->DOF2  ----------->RAV1(1)    --------->AHL20(2) --------->ANAC46       <---------GLK1(2)<---------YAB1 <---------DREB2C(2)     --------->AHL20(2)    --------->ANAC46 ---TEIL        --------->ANAC46       <---------MYB46(3)  <---------YAB1       --------->ARR11(3)   catttacaagattagcacaaaccattatgctaaagttttagtcggtgcaacatatataaatatgaaaaaataaactattgaatatatacacaacaaaaga  21690600                                                        <---------DAG2                                        <---------AHL20(2)                                  ---------                                       --------->AHL20(2)                                --------->SPL7                           --------->ARR11(3)           <----------DOF2           <---------ZAT14                   ----------->GT1 <---------TOE2(3)   <---------ANAC58           --------->ZAT18              <---------YAB1  <----------DOF2          <---------ANAC58      <---------ANAC58    <---           <---------YAB1  <---------ARR11(3)     <---------ICU4             <---------ANAC58 <------         <--------HAHB4    --------->GLK1(2)   --------->YAB1          --------->ZAT6    <---------ZAT18         --------->YAB1   --------->RVE1(1) --------->YAB1           <-----------GT1 --------->ANAC46 ->DOF2 <---------YAB1    --------->CCA1(1)<---------AHL20(2)    <----------DOF2  --------->ETT(2)   caatttctctattattatgttgagaaaaaaatctttttagattaaataatagtaatggctttatgggctttttactctatcgtgtccacagtacccccaa  21690700                                                   *TSS                                                --------->DAG2             <----------DOF2                                              ---------->DOF2           ------>MYB46(1)                                          --------------->AGL15         ------>MYB83                                          <---------------AGL15       <---------MYB46(2)             ----------->GT1             --------->YAB1               <---------MYB59     ---------->DOF2                     ----------------->AG         <---------MYB111(1) >ANAC46 --------->ARR11(3)              <-----------------AG    --------->ANAC58 ------MYB52(2)  ---------->DOF2         <-----------------AGL1  --------->ANAC58 ---ALFIN1 <------------CBF           <----------DOF2    <------ZmHOX2a(1) <---------DAG2      ------   ctaaacaaaaagaaattgttaaagagctctctctctctctctttcataaaaaggcaagaggagagccaagtaccaaactttttccttcagggttttcctc  21690800                               <----------DOF2                           <----------DOF2                          <---------ANAC58                          <---------ANAC58                                             ---------->DOF2 >ZmHOX2a(1)            <-----------GT1                <-----------GT1     <---------GLK1(2)     <---   tcaaaatcccaacttggcctctgtttttgctttcttttatgttctcttcttctctaaaaaccatctcatacttccaagaatttctctcacaaagaccaag  21690900                                                          --------->GLK1(1)                                                          <---------RVE1(1)                  <---------LBD16                        <---------ARR11(3)                --------->GLK1(2)                        <---------GLK1(2)               <---------ARR11(3)      --------->ANAC58  <---------ARR14(2)               <---------ARR14(2)      --------->ANAC46  --------->ARR11(3)               --------->ARR14(2)      --------->AtLEC2  --------->ARR14(2)               --------->ARR11(3)      --------->ANAC58--------->LBD16                 --------->YAB1             <---------YAB1       <---------MYB52(1) --------->LBD16                  <---------ATHB12         ------->TEIL            <-------GAMYB  <-----------HVH21          <---------ARR11(3) ------ARR11(3)<---------GLK1(2) <-----------HVH21  ----------->RAV1(1)    --------->ARR11(3)   aactcaaaatgtatcaagattctggattaatgctccgttacatgcaaaactgtcccccagatattcaacaattcgaagacctcttcaaatcatacaaact  21691000                                                                         <----------DOF2                                                                  <----------DOF2                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                               <---------ARR11(3)                                                               <---------ARR14(2)                                                               --------->ARR14(2)                                                               --------->AGP1               <------MYB46(1)                                             <---------ICU4    <-----------ARR10            <------MYB83                 <----------DOF2            --------->AHL20(2) <---------AGP1      <---------ANAC58                 <---------DAG2  <---------MYB52(1)            --------->ARR11(3)  <---------ANAC58 --------->At4g35610  <----------DOF2 <-----------GT1         <---------CCA1(2)<----------DOF2<<<<<<<   ctccgatgaaatggtctcacttttctttcaattctgtttttttcaattcattacatttgattacagatctttcttctttttctttacttgagattggttt  21691100                                     <------MYB83                                     <------MYB46(1)                                   <---------ANAC58                                  <---------MYB52(1)                              <----------DOF2                                <---------YAB1               <-----------GT1      <---------DAG2                             --------->GLK1(2)               ------->TEIL--------------->AtSPL8            <----------DOF2 --------->ARR11(3)            <---------REM1(1)     ------>ZmHOX2a(1)      <-----------GT1       <---------GLK1(2)            <---------TOE2(3)  ---------->ID1         -- <<MYB2<-----------GT1  ---------->DOF2             <----------DOF2     <----------DOF2<---------ANAC58   tcaatttttaaacactttgttttggttaaagattctgataggttttttttttgtcttttgatgtaactagtcttctttgttcctctttttcttggtttac  21691200                      <---------ANAC46                     <----------DOF2                          <                      <---------bZIP60(2)             <------------MYB.PH3(2)                       <                    <---------ZAT14                   <---------MYB59  ----------->GT1             --            --------->ZAT18                 <---------ZAT6 <---------DAG2                          <-            <---------ZAT18    <-----------RAV1(1)   <---------At4g35610                         ---- --------->GT1      --------->ZAT14 <---------ANAC46 --------->At4g35610                  --------->O2   gaagttaaaatttgtccactagtgaagtggtttttgtggtgtttaagtgttaagtagctaacttttttttttctggtgaaatttttgtagccacttgatg  21691300  Previous    Next  AGI:  At5g53420.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27900.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27900.2); similar to Os05g0595300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001056514.1); similar to hypothetical protein OsI_020507 [Oryza sativa (indica cultivar-group)] (GB:EAY99274.1); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 21690751    to: 21692959    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version