Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->YAB1                                                                               --------->ATHB51                                                                               <---------ICU4                     <-----------GT1                                          <---------ATHB12            <------MYB46(1)                      <---------ARR11(3)--------->ARR11(3)            <------MYB83                         --------->GLK1(2) <-----------ARR10           <---------------AtSPL3                --------->ARR11(3)--------->GLK1(2)           --------->MYB111(1)      ------>ZmHOX2a(2)              <---------ARR11(3)  <---------YAB1           <---------------AtSPL8  --------->GLK1(1)          ----------->GT1 <---------ATHB51 --ATHB12  --------------->AtSPL8  <---------GLK1(1)      <---------AHL20(2)  --------->ICU4   ggcttaaactgagttggtacttaaaaccatctatctgatctctgagtgaaaaatctttgttatattgaaaatctaatgcaattatggctctcattgccat  21678300                                                ------->TEIL                                           <-------GAMYB                                          --------->MYB55(2)                                          <---------MYB46(3)                                         <---------AtMYB61                                       <------MYB46(1)                                       <------MYB83                                      --------->MYB111(1)                               <---------ZAT18                                  --------->ATHB12                                      --------->ZAT18                     ----------->GT1  <---------AtMYB61        <---------YAB1<---------AHL20(2)        <-----------HVH21       <---------WOX13(1)       ------>ZmHOX2a(1)  --------->AHL20(2)   tctcatctttggtcacagtgagacagtacaaaagattgatttggtggttgcacctattcctcattcttattctgaacatttaatatcaattgcacttagt  21678400                                                  <---------ANAC46                                <---------DAG2    <---------ANAC58     <----------DOF2                   <---------DAG2                 <---------ANAC58    <---------ANAC58              <                 <---------PCF2 <----------DOF2<----------DOF2        <---------ANAC58        -------                ----------->TCP11(1)     <----------DOF2  <---------ARR11(3)                 --------              --------->ALFIN1 <------------------------ANAC81  <---------YAB1              <--------  --------->ARR11(3)<----------DOF2   ---------->ID1      --------->ARR11(3)             <---------ARR11(3)   ttgttatcttgtctaggtgggccttttgccctcgctttttgttctttttctttcttggaagttcttacgatggctttgtttttgatatcaagttctcata  21678500                                                                                  --------->AHL20(2)                                                                                  <---------AHL20(2)                                                     --------->ATHB12            <---------AHL20(2)                                                   <----------DOF2         ----------->GT1                                             <--------P                  <-------GAMYB                                          <---------TOE1(3)             <------MYB83           <---------MYB46(3)             <---------TOE2(3)             <------MYB46(1)          <--- ---------YAB1                --------->ANAC46    ----------------->AGL1<---------MYB46(3)     ------ -------------->WRI1          --------->ANAC58 <------MYB83            --------->MYB59        <------ ->YAB1    <-----------RAV1(1)--------->ANAC58 <------MYB46(1)         <---------AtMYB61      <------ -YAB1   <----------DOF2     --------->SPL7  --------->ALFIN1<----------DOF2     --------->AHL20(2)   gtatgcttagcctttgttggaggcttagtcatacgacactaattaaggttgggccttattgggctctactggtttggttgtaaaaaaatttttggcccag  21678600                                                                       *TSS                                                                   --------->HSFB2a(2)                                                                   <---------HSFB2a(2)                                                                  <-----------------AGL1                                                              --------->HSFB2a(1)                                                              <---------HSFC1(2)                                                              <---------HSFB2a(1)                                                              --------->HSFC1(2)     <----------DOF2                                         ------->TEIL ---ZmHOX2a(1)                                           <---------HSFB2a(2)                     ---- --->LBD16                         ---------->DOF2       <---------HSFC1(1)                 ========= -----RAV1(2)                 <---------WOX13(1)         --------->HSFC1(1)     <----------DOF2 ----- ---LBD16          --------->MYB52(1)     ---------->DOF2--------->HSFB2a(2)<---------ZAT18 <--------   gaaaaaactttagcgaaaacccaagggaaatgaatgacaaagagaaaagcttactacttctcgaaccttctcgatttggggacttttcaatttccctatc  21678700                                                                         ------>MYB46(1)                                                                         ----------->RAV1(1)      ---                                                                         ------>MYB83             ---                                                                      --------->ANAC46        -------                                                                      --------->ANAC58     --------->TOE2(3)                                                 --------->ATHB12     --------->ANAC58     ----------         <----------DOF2                      <---------ANAC58  --------->ETT(1)           ----------    <---------WOX13(1)                     <---------CCA1(2) <-----------RAV1(1)           ========== ------>DOF2                   --------->HSFB2a(2)         <----------DOF2  ---------->DOF2--------->TOE1(3) ==================================================================================================== ---->YAB1                     <---------HSFB2a(2) <---------GLK1(1) ------------------------>ANAC81 -------AGL15              <---------GLK1(1)  <---------ANAC58 ---------->ID1              ----------   aaagtgaatgactttcttctccaaaatcgatttctgaaacatcccatttcttgatttccctctttgtcgcaaacccaacaaagtagagcaaaaccctaaa  21678800                                                                    --------------->AGL15                                                                    <---------------AGL15                                                                   ----------------->AG                                                                   <-----------------AGL1                                                             --------->ARR11(3)                                                             <---------ARR11(3)                                                            --------->YAB1                                                    ----------->HVH21       ------>MYB83                                 ------->GAMYB  ----------------->AGL1       ------>MYB46(1)                              --------->DEAR3(1)    --------->HSFB2a(1)                             --------->RAP2.6(2)    <---------HSFB2a(1)                            --------->ATERF1(1)  --------->GLK1(1)                                --------->DEAR3(2) ------>ANAC58                                    <---------At4g35610 ------>ANAC58                                    --------->ZAT2 <-----------GT1<---------ALFIN1 --->DOF2<---------AtLEC2                         <---------ATERF1(1)         ----------->RAV1(1) ------->AGL1                                  <---------At4g35610 <-----------------AG<---------ARR14(2) ------->AG                        >>>>>>>>>TBF1  --------->At4g35610 <----------DOF2  --------->ARR14(2) ===================================================================================MADS_MADS ========MADS_MADS        <---------TOE2(3)    --------->At4g35610 <-----------------AGL2 ------->AGL2      <---------ARR11(3) ---------->DOF2------>NtERF2 ----------------->AGL2 <---------HSFB2a(2)   acggaaaccttccatggcgattatctctgaggtagaagaagaaagcagtagcagccgacccatgatatttccctttagggcaacactcagttctgcaaac  21678900                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                           <---------ARR14(2)                                                                                           --------->ARR14(2)                                                                                           <---------MYB52(1)                                                                                          <----------                                                                                          <-------GAMYB                                                                                        <---------ANAC46                                                                                ------>ZmHOX2a(2) <--                                                                              <---------ARR14(2)  <--                                                                              --------->ARR14(2) <---                                                                              --------->ARR11(3) <---                                                                     <------NtERF2      <------NtERF2                                                                    --------->LBD16   ------------>AtMYB77                                                                  --------->LBD16   <-----------HVH21                                                                  ------>NtERF2 =====================                                                                  <---------LBD16  <---------DEAR3(1)                                                                  --------->At4g35610<------NtERF2<--                                                                  <---------At4g35610--------->ATERF1(1)                                                                <---------LBD16<------ZmHOX2a(2) <---                                      <---------ZAT14           ---------->CDC5======================                               --------->HSFB2a(2)        <-----------GT1     <---------ARR11(3)<----                               <---------HSFB2a(2)     --------->ANAC46 ===============HOX2a_HOX2a<--   <---------TOE2(3)           <---------LBD16         --------->ANAC58 ==============HOX2a_HOX2a<---   <---------TOE1(3)       <----------DOF2             --------->ANAC58 <------ZmHOX2a(1)<---------MYB46(3)   ccattagggtttttggagaaagttttcgactttctcggagaacagagcgattttctcaagaaaccctccgcggaggacgagatcgtcgtcgcggttaggg  21679000     <------ZmHOX2a(1) ------->RAP2.3(1) -----NtERF2 ------->ATERF1(1) -------DEAR4(2) --->NtERF2 -HVH21 -------ORA47(2) -------RAP2.3(1) ------RAP2.3(2) ------DEAR3(1) ===========HOX2a_HOX2a -------ERF1                       --------->ZAT2 ------RAP2.6(2)                   <---------ZAT2 ===========HOX2a_HOX2a            <---------At4g35610                                      <-------- -----ABI4(1)                >>>>>>>>>TBF1  <------ZmHOX2a(1)                               <-------- -------ATERF1(1) --------->DAG2   --------->At4g35610              ---------->DOF2       <---------TOE1(3) ------RAP2.3(3)---------->DOF2 ---------->DOF2             --------->ALFIN1              <---------TOE2(3)   cggcgaaggagaagttgaaaaaggctgagaagaagaaagctgagaaggagagtgtgaagcctgtggagaagaaagccgagaaggaaattgttaagcttgt  21679100                                                                                                   --                                                  <----------CDC5                                  --                          --------->ANAC58       --------->At4g35610                    <------ZmHOX2a(1)                          --------->ANAC58<----------DOF2                       --------------------- -ANAC58              <-----------HVH21 --------->At4g35610                    <------ZmHOX2a(1)  <-- -ANAC58        <------ZmHOX2a(1)    <---------At4g35610         --------->ALFIN1 <------ZmHOX2a(1)<-   ggagaagaaggtagagaaggagagtgtcaagccaactatagctgcttcaagtgctgagcctatagaagtggagaagcctaaggaggaagaggagaagaag  21679200  Previous    Next  AGI:  At5g53400.1    Description:  nuclear movement family protein. similar to nuclear movement family protein [Arabidopsis thaliana] (TAIR:AT4G27890.1); similar to salt tolerance protein 5-like protein [Solanum tuberosum] (GB:ABB16978.1); contains InterPro domain HSP20-like chaperone (InterPro:IPR008978); contains InterPro domain CS (InterPro:IPR007052) Range:  from: 21678671    to: 21680798    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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