Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   <---                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             --------                   <---------ICU4                                                            --------             <---------ANAC58                                                               <--------             <---------ANAC46                                                         ------->TEIL             ----------->GT1--------->YAB1                                      -------->P  <--------             <---------ANAC58          <----------DOF2                          ------>MYB83---------       --------->ATHB12     <--------ATHB1                                      ------>MYB46(1) <----   <------ZmHOX2a(1)       <---------ATHB51          ----------->GT1           ----------->RAV1(1) ------>DOF2---------->ID1 <---------ATHB12---------->DOF2              --------------->AtSPL8  -----   aaagaggattgtttggcgtaataactccaataatacaaacactttaaaagaaaatgtgttaaactgttgaatattcagtaccaacatgaatccaataatt  21676100 ------AHL20(2)                                                                               ------- -ATHB1                                                                                      <------- --AHL20(1)                                                                                  <------- ->YAB1                                                                                    <---------CCA1(1) --ICU4                                                                                    <---------RVE1(1) ->ATHB51                                                                                 <---------ARR11(3) ->AHL20(2)                                                                               <---------ARR14(2) -ATHB12                                                                                  --------->ARR11(3) -ATHB51                             <---------YAB1                                --------->YAB1 >ICU4                               <---------ANAC46              ----------->GT1 <---------ICU4 -----AHL20(2)                <-----------GT1                     --------->DAG2  <---------ATHB12<-- ---->AHL20(2)        <----------DOF2<---------ANAC55(1)         ---------->DOF2  --------->ICU4  ---   ttatatcatttcttaagtagttctctttcatgttacattatgtgtgtgtgtttacatacaaaatagaaaaagtaatttctaacaatgatgaagatattat  21676200                                                                                             <------MYB83                                                                                             <------MYB46(1)          --------->YAB1                                                                    <--------     --------->AHL20(1)                                                                    <---------ANAC58     <---------AHL20(2)                                                                    <---------ANAC46     --------->AHL20(2)                                                                    <---------ANAC58  --------->YAB1                                               <---------------------WRI1<---------MYB46(3) -->AHL20(2)                                           <---------MYB46(3)        --------->ALFIN1 --YAB1  --------->AHL20(2)                            <------MYB46(1)         <---------ANAC58<----- --AHL20(2)<---------AHL20(2)                          <------MYB83--------->ALFIN1   --------->ATHB12 -------AHL20(2)                                      <---------AtMYB61        <---------ANAC46<----- ------>AHL20(2)                                      --------->ALFIN1         <---------ANAC58<-----   ttaaaaataaaataaaaatgtgtgtttggacttactaaaatgctagagaagcgagggtggtttacgagggtgtgttcaaggccgtggatgatggctggtg  21676300                               <---------ICU4                               --------->ATHB12                              <---------YAB1                 >>>>>>>>>>>>>>>>>LFY                                                            ----                 ------>ZmHOX2a(2)                                                            <------          --------->TOE2(3)   --------->ICU4    <---------LBD16                              --------    <----------DOF2        <---------YAB1     <---------ARR14(2)                            ------>ZmHOX2a(1) -MYB46(3)<----------DOF2  --------->ICU4     --------->ARR14(2)                         ------>ZmHOX2a(1) ----ANAC46     <------ZmHOX2a(2)      ----------->GT1            --------->LBD16    --------->ARR14(2) ----ANAC58    --------->ARR11(3)  <---------ZAT14           --------->MYB46(3)      <---------ARR14(2) ----ANAC58    <---------ARR11(3)  --------->ZAT18--------->LBD16<---------ANAC46  <---------MYB46(3)   tgtctcctttaactttagatcccattgtaacgattattgcacagttaaaatccggcgaattgaacagccgtgaacatgggctaagtggttcctcctccac  21676400                                           <-----------RAV1(1)                                      <-----------------AGL3                                      ===============================================================                                    ---------->ID1          ------>NtERF2            <---------WRKY18(1)                  <---------AtMYB61       ----- ----->DEAR3(1)                   ----------->HVH21           <-----------RAV1(1)         <---------MYB52(1) ---ALFIN1<---------RAP2.6(3)     --------->WRKY12 <----------DOF2 <---------ANAC46     *TSS  <------ ->MYB46(3)                       --------->WRKY38(1)       <----------DOF2          ------------>AtMYB77   cgtctcccttgccgtcttcttgtcttcacccattctttgacctatttgtggctctttccaagctttgtggggttttggttttttcactcacagttacttt  21676500                      ----------->GT1                  ---------->DOF2                                            <---------ARR11(3)    <-        --------------->AGL15                                   <---------TOE2(3)                  <- =======================MADS_MADS                               >>>>>>>>>MYB98             <---------AHL20(1) ----->DOF2     <---------AHL20(2)                  --------->PCF5          --------->REM1(1)   <---- ----DOF2   <-----------TBP                 ------->TEIL       <-----------GT1             <---------ARR11(3)   aagctctattctctatatataaaagagttacacgattttagttatgaactcatggtccctctgtttaacatagctactacatcttcatgtcagtatattt  21676600                                                                                 --------->At4g35610                                                                             <-----------GT1                                                                          --------->ARR11(3)                                                                          <---------AHL20(1)                                                                          --------->AHL20(1)                                                                          <---------ARR11(3)                       <-------MYC3                                     --------->AHL20(1)              <---------bZIP60(1)                                       <---------ARR11(3)         --              --------->TGA2(1)                                         --------->ARR11(3)     ------              --------->bZIP60(1)                                       <---------AHL20(1)    ------- --------TOE1(3)       ------->MYC3           --------->TOE2(2)    <------ZmHOX2a(1)   <---------CCA1(2) --------TOE2(3)    <---------ALFIN1          --------->TOE1(2)   ----------->GT1<---------At4g35610 -----AHL20(2)<---------TGA2(1)            <-----------GT1       <---------TOE2(3)   <---------ALFIN1   tatggtttttcttatgacatcaccacatggacattactatgttttataccttcgattttttgttactgaggaaaaatattttcagccccaaatctaaaaa  21676700                                                                                                  ---                                                                                                  <--                                                                                                 ----                                                                                               <-----                                                                      <----------DOF2          ------                                                                      --------->TOE2(3)  ------>MYB46(1)    <---------YAB1          <---------WRKY38(1)                --------->ANAC58          ------>MYB83 <---------YAB1           <-----------HVH21            ------>ZmHOX2a(1)    <---------ICU4    <------ --------->GT1          <---------ZAT6       --------->YAB1    --------->ANAC58        ------->GAMYB< --->DAG2      --------->ICU4              --------->AHL20(2)  --------->ANAC46       --------->DEAR3(2) --->DOF2      <---------ARR14(2)         --------->YAB1<---------TOE1(2) <---------TOE2(3)   -------   gttgttattcttatgcaaatattgtagtggtcaaatcaccagaataaaaataaactcctagggacacgaaaactttaatgaatactctaccgactattaa  21676800          --------->AHL20(1)          <---------AHL20(1)          <---------AHL20(2) ------>YAB1 -------ICU4 ----->ICU4<---------YAB1                                                ----------->GT1 ----ICU4 --------->AHL20(2)                                       <---------ZAT18 --->YAB1--------->YAB1                   ------>ZmHOX2a(1)   <---------ZAT14 ---AHL20(2)                             --------->TOE2(3)    --------->ZAT14 ---------YAB1    <---------YAB1         --------->TOE1(3)  <---------YAB1            <------ZmHOX2a(1) -->AHL20(2)<---------ICU4      ----------->GT1         <---------WOX13(1)           ----------->GT1   ttatgttcgaattataatttctgatttggaagagaagttaattccttaattctaagtgaatgactatagtgcaaattgataaataagaggaaacatattt  21676900                                                                                               <-----                                                                                         --------->ANAC58                                                                                         --------->ANAC58                <---------AHL20(2)                                                     --------->ARR14(1)              --------->ANAC55(2)                                                      --------->CCA1(2)            <---------AHL20(2)                                                        <---------ARR14(2)            <-----------GT1                           --------->ARR11(3)              --------->ARR14(2)     ----------->GT1                                  <---------ARR11(3)         --------->CCA1(2)     --------->YAB1  <-----------GT1                  <---------GLK1(2)         --------->ARR14(2)   <---------ZAT14  <---------AHL20(2)   --------->YAB1<---------RVE1(1)        <---------ARR14(2)   tggactatagtaatttacttaatttatcttccaaattagactatcaaactatagtagattttttgctaaacaaactatagtagatagggatacgctaatg  21677000  Previous    Next  AGI:  At5g53390.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G38995.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48523.1); contains InterPro domain Protein of unknown function UPF0089 (InterPro:IPR004255); contains InterPro domain Protein of unknown function DUF1298 (InterPro:IPR009721) Range:  from: 21673960    to: 21676488    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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