Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------YAB1                     -------->HAHB4                     --------->ATHB12                     <---------AHL20(2)                     --------->YAB1                                      <---------ARR11(3)                     <--------HAHB4                                     <---------RVE1(1)                     -------->ATHB1                                     --------->GLK1(1)                     <---------ICU4                                     --------->RVE1(1)      ----------->GT1--------->ATHB51                                   <---------GLK1(1)  <---------MYB52(2)<---------YAB1                                      --------->CCA1(1) --------->DOF2     --------->ICU4                                     --------->ARR11(3) ------>MYB46(3)    <---------ATHB51                                   <---------ARR11(3)           - ---->P--------->TOE2(3)                                             <---------TOE2(3)              - ---->MYB52(1)    --------->YAB1                                  ------>ZmHOX2a(2)     <---------AHL20(2) ---MYB52(2)     <---------AHL20(2)                           <---------YAB1            --------->AHL20(1) ---MYB46(2)     <---------YAB1                   --------->YAB1<---------ARR11(3)      <---------AHL20(1) -->MYB46(3)     --------->AHL20(2)              <---------YAB1 --------->ARR11(3)      --------->AHL20(2) ---MYB111(1)<---------AHL20(2)      <---------AHL20(2)   <----------DOF2--------->ARR11(3)        -- >MYB52(1)   --------->AHL20(2)      --------->AHL20(2)   <---------DAG2<---------CCA1(1)  <---------WOX13(1)   accaaagaacgttatatatataattattagaagtttgattttaatctagacatcatagtgctttatgatctaagatatcttcatctctaattaattgata  21671400                                                                      ------>NtERF2                                                                     --------->LBD16                                                                    <---------ANAC58                                                                    <---------ANAC58                                                                    <---------ANAC46          <----------DOF2        <---------ZAT18                   <---------LBD16 --------->MYB46(3)          <---------AtMYB61                 --------->ATHB12            <---------ZAT6 <---------MYB111(2)--------->At4g35610                 <---------ANAC55(2)        <---------ANAC46 ----->MYB83        <---------At4g35610                 --------->ANAC55(2)    <-------GAMYB ----->MYB46(1)   <---------ANAC58                     --------------->AtSPL8 --------->MYB52(2) ------->ANAC46   <---------ANAC58   <----------DOF2   <---------------AtSPL8 <---------MYB46(3)   ccaacaacttctcttttatggcttctgagttttggtgggctttgggctagaagctattaagtacttcattgcgggcatgtttgttgtttggaagagttag  21671500                                                                                                   --                                                                                                   --                                                                                                 <---                                                                                                -----                                                                                               ------                                                                                       --------->TOE2(3)                                                                                       --------->TOE1(3)                                                                                     <---------TOE2(2)                                                                                     <-------TEIL<---                                          <---------ANAC46                           <---------TOE1(2)                                          <---------ANAC58                           ------->TEIL<---                                          <---------ANAC58                           --------->SPL7--                                      <------------CBF                             --------->TOE2(2)         --------->ANAC58           <---------AHL20(1)                            <---------ANAC55(2)         --------->ANAC55(1)        <---------AHL20(2)                           <---------------AtSPL3         --------->ANAC58           --------->AHL20(2)                           --------------->AtSPL8         --------->ANAC55(2)        --------->AHL20(1)                    <---------ARR14(2)   ======         --------->ANAC46           <---------ARR11(3)                    --------->ARR14(2)   ------         <---------ANAC55(2)        --------->ARR11(3)               <---------At5g28300<---------MYB52(1)  <--------------OsCBT            ------->TEIL                      <-----------GT1<---------SPL7<---   ccgtataacacacgtattacatggaatcaatagatgaatatattgcgagaaactacataagagaaactatttaccctatctactacgtacgttaatctac  21671600                                    <---------PCF2                                 --------->ALFIN1                                <-------MYC3                                ------->MYC3                                <-------PIF5    --------->ANAC55(2)         <-------MYC2                    --------->TOE2(3)    <---------ANAC55(2)         ------->PIF5                    --------->TOE1(3) ------->MYB52(1)               ------->MYC2                  ------->TEIL ---->MYB83           ------------>CBF                     <---------ANAC58 ------MYB111(1)     --------->ANAC58                      <---------ANAC55(2) ---->ANAC46         --------->ANAC58                      --------->ANAC55(2) ->TEIL      --------->YAB1    <---------bZIP60(2)         <---------ANAC55(1) ------MYB46(2) <---------ICU4 --------->O2               --------------->AtSPL8 ------MYB59 <---------ICU4    <---------O2 ----------->GT1<---------ANAC58 ------->TEIL ---->MYB46(1) --------->ICU4  <---------TGA1a            <---------------AtSPL3 ========================================MYC_MYB          --------------->AtSPL3 -->P     --------->YAB1       <---------ANAC46           <---------------AtSPL8<---------YAB1 ------MYB111(2)--------->YAB1 --------->TGA1a           <-----------GT1------->TEIL         <-------   ctaactacgtattcataatcatgaagcaatctcacgtgggacaaacctgttaaatggaattacgtaccttaatgtatgcattttgatggaatctagatac  21671700              --------->YAB1          <---------ICU4          <--------HAHB4          --------->ATHB51         <---------YAB1         --------->ICU4                                    <-----------GT1                          -      <---------AHL20(2)                               --------->AHL20(2)  --------->CCA1(2)        < --------->AHL20(1)                                    <---------AHL20(2) <---------ARR11(3)       -- <---------AHL20(2)             ----------->GT1   ------------>CBF        --------->ARR11(3)       -- <---------AHL20(1)      --------->STY1(2)   ------>ZmHOX2a(1)            --------->ARR11(1)       -- --ARR11(3) <---------YAB1   <---------STY1(2)   <-----------GT1        <---------TOE2(3)     <------   taaaatatttcattattaataacgtctagctatctagttacttagtccttgttacaattttttactataagtttaagatatgactcaaactaaaatagaa  21671800                                                                                      --------->LBD16                                                                                     --------->LBD16                                                                                    <---------LBD16                                                                                  <---------At5g28300                                                      ---------->DOF2            <---------WRKY38(1) -------->STY1(2)                               --------->ARR14(2)              ----------->HVH21 ---------STY1(2)                               <---------ARR14(2)             <-----------HVH21 ------->ANAC58                                <------ZmHOX2a(1)              --------->ANAC46 ------->ANAC58                                --------->ATERF1(1)       --------->KAN4(2) ------->ANAC46         ----------->TGA1     --------->ALFIN1          <---------MYB52(1)  ---------- ----ID1  <------------CBF                  <------ZmHOX2a(1)         <-------GAMYB<---------LBD16   caagctagacaaaattgagagagaaaatgacgaaggaagaagtagaggaggagcctctaagcccgatggctcggttattccagtcaccggggatagaaaa  21671900                                                  --------->HSFB2a(2)                                                  <---------HSFB2a(2)                <------MYB46(1)           --------->TGA2(1)                <------MYB83              <---------TGA2(1)              <---------WOX13(1)          <---------bZIP60(1)                       ------>ZmHOX2a(1)            --------->ATHB12              --------->bZIP60(1)      --------->MYB52(1)           --------->ICU4                <<<<<<<GRF7     <---------ANAC46    --------->ANAC58           <---------YAB1              ------>ZmHOX2a(1) <---------ANAC58    --------->ANAC46   <---------ICU4            --------->ICU4    <---------YAB1   --------->YAB1<---------ATHB12   <--- ->GT1--------->YAB1  ---------->DOF2<---------ICU4      <---------ANAC58    --------->ANAC58 -------   ttgcattatcacgatgattggtttcaaagccaagattaatcctgacatcattctagatgacttgaagcataacgtttccaagcatcctcgtttctgtagt  21672000                                                      <---------AHL20(2)             <---------ALFIN1                    <---------TOE2(3)       <---------WOX13(1)    <---------MYB59    <-----------GT1                         --------->At4g35610 ------AHL20(2)            ------->TEIL    <------ZmHOX2a(1)          <---------ANAC46  <---------At4g35610 ---->GT1  ----------->RAV1(1)           <---------TOE2(3)            ----------->GT1 <-----------RAV1(2)   aaattggtaattgccacacatacaaattgtacctagttttatttaggatttaacattttttttgtatgcattgtgtaaaattttgaagtcagatgatggt  21672100                                               --------->ANAC46                                           <-----------GT1 ------>MYB83                                        --------------->AtSPL8                        <---------ANAC58               ---------->DOF2        ------->TEIL         ------>MYB46(1)            <---------ANAC58 --------->CCA1(2)             --------->ARR11(3)          -------->P   ---------->DOF2  <---------ANAC46   gagagatggatgaagaccaaagtcaatgtagaagaccatgtatttgtaccagacatagacctacaagagattaacaaagatggagatggcttcgtcgatg  21672200                                                                                               <-----                                                               ------>ZmHOX2a(1)               <-----                                                              --------->TOE2(3)                <-----                                                           <---------ARR14(2)                  <-----                                                           --------->ARR14(2)                 <------                                                          <---------CCA1(2)                   -------                                                        --------->YAB1                        <------                                                       <-------TEIL                           <------                                                    --------->KAN4(1)                        <-------                                                    --------->GLK1(1)                        <-------                                                   <---------ARR11(3)                       <--------                                                   <---------KAN4(2)                  <---------At4g35610                                ---------->DOF2    <---------ARR14(2)           --------->At4g35610        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      --------->ARR14(2)          ----------->HVH21        <---------ANAC46 ------>ZmHOX2a(1)         --------->ARR11(3)        ----------->RAV1(2)   actatgtctcgcgtctaacattgagtcctctcgataaatcgaaaccattgtgggatattcatatcctcaatgtcaaaacatctgatgcagaagcggtcgg  21672300  Previous    Next  AGI:  At5g53380.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G12420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48523.1); contains InterPro domain Protein of unknown function UPF0089 (InterPro:IPR004255); contains InterPro domain Protein of unknown function DUF1298 (InterPro:IPR009721) Range:  from: 21671827    to: 21673765    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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