Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->At4g35610                 --------->DEAR3(1)                 ------->GAMYB                --------->MYB46(3)                --------->DEAR3(2)                                                          ---------                <------------AtMYB77                --------->YAB1            <---------HSFB2a(2)               -------->P                 --------->DAG2             <--------P   --------->ZAT2               --------->MYB52(1)        ---------->DOF2           ----------->GT1<---------ZAT2              --------->MYB52(1)     --------->ANAC58          ---------->DOF2--------->HSFB2a(2) --- ->GT1      <---------MYB52(2)       --------->ANAC58  ---------->DOF2----------->ARR10   --------->GLK1(2)   atgtagatttaagaactaaccggcctgctacatagaaggaagcaaaagttgcaaacataaagagcaaaagggttgatattctcgagctcgataatcttat  21660400                                                   --------->ANAC46                                                   --------->ANAC58                                                 ---------->DOF2                                       --------->GLK1(1)                                       <---------GLK1(1)                                       <------ZmHOX2a(2)                                      --------->ARR11(3)                                      --------->ARR14(2)                                      <---------ARR11(3)                                      --------->AGP1                           <------ZmHOX2a(2)    <---------WRKY45 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            --------->ANAC58          <---------AGP1         --------->ANAC46            --------->ANAC58          <---------ARR14(2)     --------->ANAC58            --------->ANAC46         --------->At4g35610<---------ATHB12           ====================================HOX2a_HOX2a   --------->RAP2.6(2)           =======================HOX2a_HOX2a   <---------WRKY38(1)           ===================================HOX2a_HOX2a    --------->ANAC58      <----------DOF2     --------->AGP1------>ZmHOX2a(2)--------->YAB1          <---------ETT(2) >TOE2(3)  ------>ZmHOX2a(1)----------------->AGL3 --------->ANAC58       --------->ZAT14          <- ------>ANAC46     --------->AHL20(2)<---------CCA1(2)--------->WOX13(1)  <---------ZAT14  <------ZmHOX2a(2)   actcgaccctttcctcgccattgaaatagatccaaaatcagatctcttagtcaaagcaatcagacgcaaatgcctcttcactgtcgaaattcgatcaaat  21660500                                         <--------ATHB1                                         <------------ATHB5                                         --------->ATHB12                                        --------->ICU4                                   <------ZmHOX2a(2)                                     ------>ZmHOX2a(2)                         --------->ARR14(2)                                             --------->At4g35610                         <---------ARR14(2)                                             <---------At4g35610                         <---------GLK1(2)       <-----------TGA1                      --------->ARR14(2)                   <---------GLK1(1)    <---------ATHB12                               <---------ARR14(2)                   --------->GLK1(1)------>ZmHOX2a(2)                                  <---------AGP1                --------->LBD16<---------HSFB2a(2)     --------->YAB1            --------->ATHB12               <---------HSFB2a(2)<---------ARR14(2) --------->ANAC58           <---------YAB1               --------->HSFB2a(2)--------->ARR14(2) --------->ANAC58          ------->TEIL          --------->ARR14(2)   --------->HSFB2a(2)  --------->WOX13(1)   =======================HOX2a_HOX2a         <---------CCA1(2)--------->GLK1(1)      <-----------HVH21       <------ZmHOX2a(1)         <- ----------GT1<---------LBD16 <---------LBD16  ---------->ID1   <-----------------AG   --------->ARR11(3)   ttcactaattcaaatctccagaaatcggattttctggatccaatgattcgtcgtcactcaaaataaaaccgattaggaatgtatcattggatctgcaatt  21660600                                               <---------At4g35610                                               --------->At4g35610                                             --------->ZAT14                <---------At4g35610        --------->O2           <-----------GT1                 <---------O2        --------->ARR14(2)      --------->ICU4                <------ZmHOX2a(2)          --------->GLK1(2)      <---------YAB1      --------->MYB52(1) <---------ZAT14   <---------ARR14(2) --------->LBD16--------->At4g35610<---------ARR11(3)         <---------GLK1(2)   <------ZmHOX2a(1) --------LBD16  <---------LBD16    --------->ARR11(3)   --------->DAG2 ----------->GT1--------->CCA1(2)   ctccggtgatgattcaccagcggaacacaaacggcgagatcactcacttcgctgagaaaaattggaatctggattgagaaataaggagagacaagagaag  21660700                <---------YAB1                                          <----------DOF2         <---------TOE2(3)                                           <---------AHL20(2)  ------>MYB83      <---------MYB52(1)                                          <---------ICU4         ------>MYB46(1)     <-------GAMYB                                          ------>ZmHOX2a(2)           *TSS    <---------ANAC46                                      --------->ARR11(3)           <---------MYB46(2)  <---------ZAT18                                         <---------ARR11(3)     --------->WOX13(1)  --------->ZAT18     <---------YAB1                <---------ANAC46 <-----------GT1   <---------MYB59   agagtgccgttgagatttatgatttttatcggattagtttttgggatgtcaattttgtgtgatcttcttaattactttctgatcaattaccaaacctagt  21660800                                                                                                -----                                                                                             ------>MYB46(1)                                              --------->AHL20(2)                            ---------                                              <---------AHL20(2)                            ---------                                   --------->AHL20(2)                                       <--------                                   <---------AHL20(2)                                      --------->MYB46(3)                                  <---------AHL20(1)                                       <---------MYB55(2)              <---------YAB1      <---------AHL20(2)                           <-----------HVH21-----           <---------YAB1         --------->AHL20(2)               <---------DAG2       <-----------GT1        <----------DOF2      ------------>CBF--------->AHL20(2)    <----------DOF2   <---------ICU4    <---------GLK1(2)    --------->ZAT6  <---------YAB1 --------->ATHB12      ----------->GT1------>MYB83   ctctctgattcttttgattataggttaactctacaatttaattctcatttatttctactgatttgtaaactttttcgaaactgtcaaatattacccaccg  21660900                                                              ---------->DOF2                                                         <-------GAMYB                                                        <---------DEAR3(2)                                                        --------->MYB55(2)    --------->DAG2                                      <---------MYB46(3)   ---------->DOF2                                     <---------DEAR3(1) ---->LBD16<-----------RAV1(2)                        <------NtERF2         --------->WRKY18(1) >ANAC46   ===============================RAV        --------->LBD16    <------ZmHOX2a(1) >MYB55(1)<------ZmHOX2a(2)                     <-----------GT1       --------->ALFIN1  <---------ANAC46 -ALFIN1 <-----------HVH21    ----------->RAV1(1)  <---------LBD16 --------->ALFIN1  --------->DEAR3(1) ---->At5g28300     <----------DOF2   ---------->ID1--------->ANAC46 <------ZmHOX2a(1)------>NtERF2   tgaaaaaaagggatcaggtgttctttactaaacaacatttgttttttttgttacccggcggttgaaaaggaggaggaggtcaagacgacgacgtttaaaa  21661000             <---------ARR14(2)                     <---------ARR11(3)             --------->ARR14(2)                   ----------->ARR10         <----------DOF2         <------NtERF2                        --------->ATHB12             <---------DAG2        <-----------HVH21                  <------------CBF             XXXXXXXXXXXXXXXXXXXXX>MIR4221        <---------RAP2.6(3)              --------->ICU4                 <-----------GT1       --------->RAP2.3(3)               <---------YAB1                ---------->ID1       --------->RAP2.6(2)            <---------YAB1--------->ARR11(3) <-----------GT1   <---------AtLEC2       ----------->GT1          -------->P--------->ATHB12            <-----------GT1  <-----------GT1   aaccatgggccgtcaaatactctcgtcaaactcttaccagatgattattgattagatattctctcttccatttttcccctttcgaatttttgcatttcat  21661100                                                                       ---------->DOF2                                                                    --------->ANAC46                                                --------->TGA2(2)   --------->ANAC58         <---------ZAT18                       <-----------TGA1     --------->ANAC58      <---------ANAC58                   --------->GLK1(2)      <----------DOF2      <---------ANAC46                   --------->ARR14(2) <---------ARR14(2)                     <-      <---------ANAC58   <---------CCA1(2)    <---------ANAC58  ------>ZmHOX2a(1)           <--------  ------>ZmHOX2a(1)      <---------At4g35610  <---------ANAC58 --------->TOE2(3)         <-----------GT1  <----------DOF2       *TSS             <---------ARR14(2) --------->ARR14(2)      <---------YAB1 --   catccttttcgtgtgcttcacaacttcatctctctctcgagagaatttgcgtcatcaattcaaatcctttacgcaaagtttcagtttttattcactttct  21661200                                                                                           --------->ZAT2                                                                                           --------->At4g35610                                                                                           <---------At4g35610                                                                                         <------NtERF2                                                                                        <---------At4g35610                                                                                        --------->At4g35610                                                                                        <------NtERF2                                                                               ------>NtERF2                                  --------->TOE2(3)                            --------->LBD16                 <---------ARR14(2)                                           --------->ANAC58                 --------->ARR14(2)  --------->WOX13(1)                       --------->ANAC46                ------>MYB83      --------->YAB1      <----------DOF2         --------->ANAC58   <---                ------>MYB46(1)  <---------YAB1       <---------DAG2       --------->ARR14(2)    <--- --------ANAC55(2)        ------>ZmHOX2a(2)        --------->ARR11(3)      <---------ARR14(2)<------- --DOF2     >>>>>>>>>>MYB80      ----------->GT1   <---------ARR11(3)  --------->ANAC46--------->RAP2.6(2) ------->ANAC55(2)   ------>ZmHOX2a(1) <---------ATHB12   XXXXXXXXXXXXXXXXXXXX>MIR838 <---------RAP2.6(2)   tacataacccatcaaaccaaatcctcgatcggattatgttaatcaattgctaagagctttttcttctacttcttcgcaatccgccatggccgcagcttta  21661300  Previous    Next  AGI:  At5g53340.1    Description:  galactosyltransferase family protein. similar to transferase, transferring glycosyl groups / transferase, transferring hexosyl groups [Arabidopsis thaliana] (TAIR:AT2G25300.1); similar to beta 1,3-glycosyltransferase-like protein I [Solanum lycopersicum] (GB:CAD30015.1); contains InterPro domain Glycosyl transferase, family 31; (InterPro:IPR002659) Range:  from: 21658035    to: 21660788    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g53350.1    Description:  CLPX (Clp protease regulatory subunit X); ATPase. similar to ATP-dependent Clp protease ATP-binding subunit ClpX, putative [Arabidopsis thaliana] (TAIR:AT1G33360.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75136.1); contains InterPro domain ATPase AAA-2 (InterPro:IPR013093); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593); contains InterPro domain ClpX, ATPase regulatory subunit; (InterPro:IPR004487) Range:  from: 21661124    to: 21664933    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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