Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <---------ICU4                  <--------HAHB4            --------->ANAC46                 <---------YAB1        --------->REM1(2)                        --------->LBD16                 --------->ICU4   <---------ARR11(3)                           --------->ANAC58           <-----------GT1   <------ZmHOX2a(2)                             <------ZmHOX2a(1)          ---------->DOF2   --------->ARR11(3)                 --------->YAB1  --------->ANAC58     <---------YAB1 <---------YAB1--------->ARR11(3)   ----------->GT1 ---------->DOF2   gtatactaccattaaaccgattattagagagatcaagaacttgtagacgctcccaagaagataaatcagaaggcaaaggacccgaaaactcgttgaagtc  21655200                                                   --------->LBD16                                                  --------->HSFB2a(2)                          <---------ANAC58        <---------HSFB2a(2)                          <---------ANAC58  --------->DAG2                      ---------->DOF2      ---------->DOF2            <---------TOE2(3)         -----                <---------ARR11(3)       <------ZmHOX2a(1) <---------MYB46(3)              <---------ANAC58                --------->ARR11(3)  <---------REM1(1)  --------->ARR11(3)                  <---------ANAC58          <-----------HVH21    ---------->DOF2  <xxxxxxxxxxxxxxxxsmallRNA(i)   <---------ARR14(2)   gagtttaagctctgtcaagttcttcaaagcttgtaaagttgtaggaaaagttccagagatgttgttggaactaagaatgagaaaccgaagattgcttaac  21655300                                   --------->TGA1a                                   <---------TGA1a                                   --------->O2                                   <---------O2                              --------->WRKY38(1)                              --------->WRKY12                              ----------->ARR10                                     <---------MYB52(2)                           <---------ANAC46                              ------>ZmHOX2a(2)                          ------>NtERF2                               --------->ATHB12                    <---------ARR14(2)                               --------->ICU4--------->ANAC58              --------->ZAT6--------->REM1(2)                        <---------HSFB2a(1)         <---------ANAC58 --------->LBD16 --------->At4g35610        --------->KAN4(1)            <--         <---------ANAC58--------->LBD16  <---------At4g35610       <---------KAN4(2)   <---------ALFIN1       <---------YAB1   <---------LBD16 <---------ANAC46     --------->ZAT6        --------->ANAC46    --------->ICU4  --------->ARR14(2)<---------MYB46(3)     <---------ALFIN1      --------->ANAC58 ------>RAV1(2)    <---------CCA1(2)--------->LBD16         <---------ZAT14  --------->GLK1(1) <-----   ctggcgatgatgcttaactctatatccccgcgtagacccgtggctgctaaatgaagagcgtcaacactggaatgatcggagttgcaagtaacaccggtcc  21655400                                <---------ANAC46           <---------TOE2(3)    <-------TEIL                <---------ANAC58          <---------DOF5.7(2) <------MYB83                   <---------ANAC58        --------->DOF5.7(2)                   ------>ZmHOX2a(2) <------MYB46(1)              <---------ZAT14     <---------TOE2(3)                     ------------- -------MYB52(1)              --------->ZAT14  <---------WOX13(1)                       <----------DOF2 --TEIL               ----------->HVH21      --------->ATHB12                    <---------CCA1(2)   atttggtacatatagaaagacttggtgaccagttgagtgaatgagagtgattgatgttgttaacgaattgaagaagagtgtgtttatcttctttgatcgt  21655500                                                                             ----------->GT1                                                                           ----------->GT1                                                                          --------->ALFIN1                                                                        <---------ANAC46                                                                <---------------AGL15               -        --------->AtLEC2               --------->YAB1           --------------->AGL15              --   <----------DOF2         --------------->AGL15               --------->TOE2(3)                   <- <---------At4g35610       =====================================================MADS_MADS          -- -------->WRI1  <---------------------WRI1                     <-----------------AGL3  ----------->GT1   ctctgcttctatgcagacgttgaagattactacgatgagtatcaaaacaacttggcacttcattttcttaattagggtggagaaaaaactggttttaaga  21655600                -------->HAHB4                <---------ICU4                --------->YAB1                                        <------------CBF             --------->YAB1                                          --------->ATHB12            <---------YAB1                                           <---------ICU4          --------->YAB1                                             --------->ATHB51      <---------ANAC58                                               -------->ATHB1      <---------ANAC46                                              <---------ATHB51      <---------ANAC58                                           <---------YAB1      ----------->GT1                                  --------->YAB1<--------ATHB1                 -   --------->ALFIN1     *TSS                          <---------AHL20(2)       <---------ANAC46   <-- -------->DAG2 <---------ATHB51                      --------->AHL20(2)     <----------DOF2      ---- ------->ZAT14 --------->ICU4                     --------->CCA1(2) --------->ICU4          --------- --------ZAT14 <---------YAB1                    --------->ARR11(3) <---------YAB1        <---------- -------->DOF2<---------AHL20(2)               --------->MYB59  ------------>CBF       <----------DOF2   gtaaagtggcgtttataataatggatgaagatgaagaagtgagattagttagatatataataagtttacaattattgacttttgtggagctatattgtaa  21655700                                                            <---------TOE1(3)                                                        <---------ANAC58    <---------DEAR3(1)                                                        <---------ANAC58   <-------TEIL                                                     <--------P           --------->ARR14(2)                                                    <---------ANAC58    <------MYB46(1)                                                    <---------ANAC58   --------->MYB46(2) -------->ATHB1                                    <------MYB46(1)     --------->MYB59 -------->ICU4                                   --------->ALFIN1      --------->MYB111(1) -------ICU4                           <---------AHL20(2)<----------DOF2<------MYB83 ----->ICU4                           --------->YAB1<-------GAMYB <---------TOE1(3) -->GT1       <---------AHL20(2)     <---------YAB1<------MYB83   <---------TOE2(3)     <<<<<<<<<<WRKY63 --CBF    ----------->GT1  <---------YAB1    ---------->DOF2<---------TOE2(3)       <---------MYB46(3)   gaattattcaataggtttaattttgttttatcagtgtgtattataacgaaagtgggttgctttaggttaatgttaggttcggcgagttgttgacttgatg  21655800                                                                               <---------HSFB2a(2)                                           ---------->DOF2                     --------->HSFB2a(2)                                        --------->At5g28300                   <---------LBD16                                     <---------At5g28300             <---------DAG2    <---------ARR11(3)                                    --------->MYB52(1)               <----------DOF2   --------->AHL20(1)                         <---------At4g35610 --------->ANAC58     <-----------GT1      <---------AHL20(1)  --------->MYB46(3)     --------->At4g35610 --------->ANAC58---------->DOF2<-----------GT1<---------   cataacaactctgtttttgtttttgtttgctgagaaaatcacggtgaaagctacttgaattttcaaagttactttttttttctggacaatatttttcaac  21655900                                        <---------REM1(1)                           --------->TOE2(2)                           <---------MYB59                   <---------ANAC46   <---------ANAC46                 <---------ANAC46     <---------ANAC58       --------->DAG2     --------->AtLEC2     <----------DOF2       --------->TOE2(3)   --------->At4g35610    <-------TEIL <---------YAB1 --GT1        <-----------RAV1(1)     <---------ANAC58      ---------->DOF2  <-------TEIL   atttgaactttgatttttgttgtgtataacctaagtagtgtcttgtagcagttgaaattagaaaaagtgagtttcatggttcatgctaattgtcgagtct  21656000                                                                                 --------->CCA1(2)                                                                                --------->ARR14(2)                                                                                <---------GLK1(2)                          <---------ANAC46                                      --------->ARR11(3)                          <---------ANAC58                                      <---------ARR14(2)                   --------->TOE1(3)                                            <---------ARR11(3)                   --------->TOE2(3)                                          ----------->ARR10                 ------>MYB83                                               ------>ZmHOX2a(1)                 ------>MYB46(1)    <-----------GT1                        --------->TOE1(2)          --------->ANAC46<---------ANAC58           ---------->DOF2  <-------TEIL   <---------AtLEC2   ------>ZmHOX2a(1)------>ZmHOX2a(1)   --------->At4g35610    <-------TEIL--------->TOE2(3) <-------   ctctccttatccactcaccttccttaagtcgtgtattgtaacagttgaaattagaaaaagagagtttcatggttcatcctaagatttgcatagttttgtg  21656100  Previous    Next  AGI:  At5g53320.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G24100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69357.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 21653467    to: 21655624    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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