Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->bZIP60(1)                                                                            --------->TGA2(1)                                                                            <---------bZIP60(1)                                      --------->ZAT6                   <---------ICU4                                    -------->HAHB4                     --------->YAB1                                    --------->YAB1                    <---------ATHB12                      --------->WOX13(1)                         --------->ANAC46               <-----------GT1   --------->YAB1                  --------->ANAC58              <-----------GT1 --------->TOE2(3)                  --------->ANAC58           <----------DOF2    <----------DOF2       <---------YAB1    --------->ICU4 <---------MYB52(1)   taaacttggaaaacttttacctgtccatcaaactttaataatactagatagtttgtgatagccatataagcaaacattacatcacccattagttcaaatg  21618300                 <---------MYB59               ------->TEIL             <---------ZAT14           --------------->AtSPL8        ----------->HVH21      ----------->RAV1(2)      --------->At4g35610                    <---------GLK1(1)          <---------ANAC46      <---------At4g35610             <---------ZAT6          ----------->GT1    ------>MYB46(1)                  <---------YAB1       ---------->DOF2    ------>MYB83 --------->TOE2(3)<---------YAB1       --------------->AGL15                    -----  --------->AtMYB61              <---------GLK1(2)     <---------------AGL15      ----------->GT1   tatacctcccctgactgtacctaaaatgtctactagattattgttagatttcagttacaaaaaagagaaaattttcgtagaacatagtgaaatggctgag  21618400                                                                                     <---------GLK1(2)                                                                                    --------->HSFC1(2)                                               <----------DOF2                      <---------HSFB2a(1)                                               <---------DAG2                       --------->HSFB2a(1)                                             ------->TEIL                           <---------At4g35610                                           <---------ZAT18                          <---------ZAT2                                           --------->ZAT14                          --------->At4g35610               <------------AtMYB77  --------->YAB1                                 <---------HSFC1(2)            --------->ZAT18         <------ZmHOX2a(2)                     <---------AHL20(2)    <----        --------->DAG2             --------->ARR11(3)                    <---------AHL20(2)     -----       ---------->DOF2          --------->HSFB2a(2)      ----------->GT1 --------->AHL20(2)    <-----     --------->DOF5.7(2)        <---------HSFB2a(2)    <---------ANAC58  --------->AHL20(1)  --------    --------->TOE2(3)  --------->ZAT14     <---------ZAT14            --------->YAB1<------NtERF2    --------->TOE1(3)  <---------ZAT14     --------->ZAT18      ----------->GT1    ----------->ARR10 ---->GLK1(1)  --------->MYB46(3)  <---------ARR11(3)  <---------ANAC58  <---------AHL20(1) <--------   ttccatcgttaaagcgaactgccactattctggtctagatcatagtgtactttttgtgcttgtaaattgtaaaaataaaattgggcagcttctccatcac  21618500                                                                    <----------DOF2                                                                    <---------------AGL15                                                            <---------AHL20(2)                                                            --------->AHL20(2)                                                            --------->AHL20(1)                                                            <---------AHL20(1)       ---------->DOF2              --------->ATHB12                    ----------->GT1   --------------->AGL15 -----ANAC55(2)                                 <---------At4g35610================================== ---->ANAC55(2)                     --------->ARR14(2)   --------->YAB1 ---------->DOF2--------->DAG2 ----LBD16    <---------AHL20(2)    <---------ARR14(2)   --------->AHL20(2)     ----------->GT1 --->HVH21   --------->ICU4--------->ARR11(3)   --------->At4g35610<-----------------AGL3 ---HVH21    --------->AHL20(2)    <----------TaMYB80  --------->AHL20(2)      ----------->GT1   gggttttcgagtatatttattagtcgaaagaaattgcatattcgattttgagcagaaaataatattttagctttaaaaggaatggaaaaaaggcaagttg  21618600                            <-----------------AGL3                            --------------->AGL15                            --------->TOE2(3)                            --------->YAB1                            <---------------AGL15                           ----------------->AGL1          <------ZmHOX2a(2)                      <---------ICU4                      --------->ARR11(3)                 ----------->GT1                          <---------ARR11(3)               ---------->DOF2 --------->ATHB51     --------->ANAC58          ---------->DOF2  <---------YAB1      <---------MYB46(3)      --------->HSFB2a(2)  ----------------->AGL3   --------->ANAC58                  ------->TEIL      <---------HSFB2a(2)<-----------GT1      <---------ANAC46        <---------AHL20(2) ===========================================MADS_MADS    <---------At4g35610  <----------------------   gaagagttatggaaaagaaaagaaaaattaccataatttggaaacttggtgggcaagacagatcatcagtttttaatagagacatgtgaaccctcatcaa  21618700                                                                                             <-------                                                                --------->LBD16          ------>MYB46(1)        <---------TOE1(3)                      <---------ARR11(3)                        ------>MYB83        <---------TOE2(3)      --------->ARR11(3)              --------->ANAC46        ------->GAMYB       *TSS    --------------->AtSPL8          --------->ARR11(3)                      --------->AtMYB61   --------->WOX13(1)          <---------ARR11(3)     <---------YAB1                  --------->MYB46(3) ------------>CBF              <---------GLK1(2)  <----------DOF2----------->HVH21   -------->P -TaNAC69(2)   --------------->AtSPL3   ---------->DOF2    <-----------GT1   <---------At4g35610   ctcatcaattagggttttctgtacaatctcttagatttttgctaaagaacatctttcttattcacccgagacatgtctctgcttctcaaccagccctcga  21618800                                ------>ZmHOX2a(1)                              ------>ZmHOX2a(2)                              ==============HOX2a_HOX2a                            <---------GLK1(2)                            --------->ARR11(3)                            <---------ARR11(3)                            <---------ARR14(2)                            --------->ARR14(2)                            --------->ARR14(3)                            <---------ARR14(3)                            --------->AGP1                           <---------GLK1(1)                           --------->GLK1(1)                          ----------->ARR10                        <---------ANAC58            <---------ANAC58                  <-----------RAV1(1)      --------->ZAT6                  --------->ALFIN1      <---------ZAT14            --------->GLK1(1)===============HOX2a_HOX2a        <---------ANAC46<---------ANAC58--------->ZAT14                                <---------YAB1     <----------DOF2   <------NtERF2 ------>ZmHOX2a(1)           ------>ZmHOX2a(1)   --------->YAB1 - --HSFB2a(2)<---------GLK1(1)<------ZmHOX2a(2)      <---------ANAC58              ------>ZmHOX2a(1) -   agctatgctttcggagacctgtgttggcgagatcctctcctcttcactctaatggcttctcttcttcctcgttgcaaacccctcctagtatgatggcgct  21618900                                                           <---------ANAC46          <<<<<<<<<<<<<<<<                                                         <------MYB46(1)          --------->YAB1                                                         <------MYB83       --------->YAB1                                                        <---------MYB46(3)<---------TOE2(3)        --               <---------YAB1                      --------->LBD16  --------->ARR11(3)            <--             <---------At4g35610              --------->ATERF1(1)   <---------ARR11(3)         <-----      <---------MYB59                  ---------->DOF2  <---------AtMYB61---------->DOF2       ------    ------->TEIL                 ----------->GT1------>NtERF2      --------->YAB1 <---------ICU4 <--- -------------->AtSPL3      <---------ICU4   <---------ATERF1(1)--------->YAB1   --------->ICU4------ -------------->AtSPL8     <---------YAB1--------->DAG2<--------P <---------YAB1 <---------YAB1<-----   caaacgtacctattttgctgattacgctcatcattttgaaaaaaaggtgcctcccgagttggtgtataatgatattaaagatgatgatgacattggaacg  21619000                    --------->MYB111(1)                    <---------MYB46(3)                    --------->MYB46(2)                 <---------ANAC58                 <---------ANAC58                 <------MYB83                 <------MYB46(1)                 <---------ANAC46                                                         ------>ZmHOX2a(2)            --------->ATHB12                                                 <-----------HVH21            <---------MYB46(3)                                               <-----------TGA1  <-----------ARR10<--------P                                               <---------bZIP60(1)    --  <---------ARR14(2)--------->MYB52(2)                                      <---------ANAC46    -----  --------->ARR14(2)----------->GT1                                         <---------ANAC58    ----- <LFY    <---------AtLEC2 --------->TOE2(3)                                 <---------ANAC58    ----- ---->ZmHOX2a(2)--------->MYB55(2)                                       <--------P     <---------ARR11(3) ----ZmHOX2a(2) <------MYB46(1)           --------->GLK1(1)             <-----------HVH21<------ZmHOX2a(2) ----HSFB2a(1)  <------MYB83  ---------->DOF2   --------->ANAC46        <-------GAMYB   --------->ARR14(2) --->HSFB2a(1)  --------->MYB111(1)   --------->ANAC58               <---------LBD16    --------->ARR11(3) ------ARR14(2) --------->MYB59       --------->ANAC58        <------ZmHOX2a(2)         <---------ARR14(2) --->MYB46(3)   <---------MYB46(3)  --------->MYB52(1)       <---------ARR11(3)        --------->At4g35610 ----HSFC1(2) <--------P  <----------DOF2 <---------GLK1(1)  --------->ARR11(3)        <---------At4g35610   atcgggtcttcgcatggttgggtagttactttaaaagacgacggaattctacgtctccaagacgatctaaacccggttgcgtcagagacagatcccaaac  21619100                                                               --------->bZIP60(2)                                                        ------->MYC3          ------>NtERF2                                 <-------MYC3                               <-        --------->ATERF1(1)                            --------->O2                              <---       ------>NtERF2                                   <---------TGA1a                     ------->TEIL       --------->ABI4(1)                               --------->TGA1a             <------ZmHOX2a(1)       <---------ATERF1(1)                             <---------O2            ------>ZmHOX2a(1) <---      --------->DEAR3(1)                              ------>MYB46(1)        ========================    <---------At4g35610                               ------>MYB83           <---------LBD16  <------ ----->TEIL                                         --------->DEAR3(1)       ----------->RAV1(2) <--- ---->ANAC58                                       <---------MYB52(2)        ======================== ---->ANAC46             ------>NtERF2             --------->MYB46(3)  ------>ZmHOX2a(1)<---------YAB1 ---->ANAC58<---------ALFIN1 --------->ATHB12  <-----------HVH21    ------>ZmHOX2a(1)----------->TGA1   gcatctcgctgccccctcttgtgactctgcctcattgccaaacccaaattgtcaccaacgtggccatgtcctcctcttctcctgaggatgacgaatgtgt  21619200  Previous    Next  AGI:  At5g53240.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G55270.1); contains InterPro domain Protein of unknown function DUF295 (InterPro:IPR005174) Range:  from: 21618707    to: 21619965    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version