Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <----------DOF2                                                                                <---------DAG2                                                                                <----------DOF2                                                                               <------NtERF2                                                                              ------>NtERF2                                                                              --------->ABI4(2)                                                                             <---------DEAR3(1)                                                                             --------->DEAR3(1)                                                                             --------->RAP2.3(3)                                                                             --------->RAP2.3(2)                                                                            --------->DEAR4(2)                                                                            --------->ATERF1(1)      <-------GAMYB                                                         --------->ORA47(2)     --------->MYB55(2)                                                     <------NtERF2     --------->MYB111(2)                                                    --------->RAP2.3(1)     <---------MYB46(3)                 <---------ANAC46                    --------->RRTF1(1)   <---------ANAC58                 <------NtERF2                          <---------DEAR4(2)   <---------ANAC58                 --------->ZAT2                         <---------RRTF1(1)  <---------MYB46(3)                <---------ZAT2                         <---------ATERF1(1) -------ICU4                 <---------ANAC58                              <---------ERF1 <----------DOF2 ------>YAB1                 <---------ANAC46                              <---------RAP2.3(1) ----->ATHB1                 <---------ANAC58                              <---------ORA47(2) ------>ATHB12              <------NtERF2                                 <---------RAP2.3(3) ------YAB1               --------->ALFIN1     --------->ICU4             <---------RAP2.3(2) ------ATHB12       <---------YAB1  <---------At4g35610                   <---------DEAR3(1) ----->ICU4   <---------DEAR3(2)    --------->At4g35610------>ZmHOX2a(2)  <---------RRTF1(3)    <---- --->YAB1 <-----------RAV1(1)<---------bZIP60(2)  <---------WOX13(1)     <---------At4g35610    <---- ---YAB1  <---------ANAC46<---------DEAR3(1)   <---------YAB1            --------->At4g35610    <----   tcattggttgttgtgtcggtttatgaaggtggcgaggcagctctgtgtgaagattgatccagacaatgtggttttagcggcgcctttggaaacttttggc  21537300                                                                                          <---------ARR11(3)       --------->ALFIN1                                                                   --------->ARR11(3)  <---------TOE1(1)                                                     ---------->DOF2 <---------AHL20(2)  <---------TOE2(1)                <----------DOF2                ---------->DOF2      --------->AHL20(2) -----ANAC58             --------->ANAC58   --------->ANAC58<---------GLK1(2)  --------->LBD16 -----ANAC58             --------->ANAC58   --------->ANAC58<---------ARR14(2)<---------ANAC58      < -----ANAC46          --------->LBD16       --------->ANAC46--------->ARR14(2)<---------ANAC58  <----   gagtacgaggtgcctcttaaattccccaagacaattcctttgccacaaggaactgttcaatggattctcaaagtcaaagtccgtggccattaaatcttcc  21537400                                                                                        ----------->GT1           ------>ZmHOX2a(1)                                              --------->ANAC58    ---------->DOF2 --------->YAB1                                        --------->ANAC46 ----------DOF2    <---------ZAT6                                         --------->ANAC58  <-------TEIL -----ALFIN1  ------>ZmHOX2a(1)        <---------ARR11(3)             --------->YAB1  <---------ATHB12   acctttgaaagtcctccttcagtgatagttctcttcttcaatatgtttcaatatagttttggaattgcagaaacataagcaaacacaaatcagttacatt  21537500                                                                  <---------AHL20(2)                                                                  --------->AHL20(2)                                                             --------->AHL20(2)                                                        <---------MYB52(1)   <---------WRKY18(1)                                 --------->LBD16  --------->WRKY12                                   <---------LBD16  ----------->HVH21                         --------->LBD16  <---------AHL20(2)                ------  --------->WRKY38(1)                     <---------LBD16  <----------DOF2                  ---------   tcccttgactcagtttttttttttttttttttgtagttgtataaaccgggtttactccggtctttaatttaaacaatgactcgaattttgcgaaaaccgg  21537600                     <---------AHL20(2)                     --------->AHL20(2)                    --------->AHL20(1)               ---------->DOF2                    --------->AHL20(2)           --------->At4g35610    --------->HSFB2a(2)                       --------->ICU4    <---------HSFB2a(2)                   ------------>CBF                            <---------AHL20(2) --->LBD16          <---------AHL20(2)    <---------ZAT18     --------->ANAC58  <----------DOF2 >MYB52(1)  ----------->GT1            <---------ANAC46       --------->ANAC58---------->ID1        <   actcgtccagaagacggataaatttaataagttttggagttttgtgcaattatctgaaagtcactcgcatatgtctatttggctttatttaaaacatttg  21537700                                                                                <---------ICU4                                                                               --------->ICU4                                                                              <----------DOF2                                                                            <------NtERF2                                                                           ------>NtERF2                                                                           --------->LBD16                                                                          --------->ANAC46                                                                          <---------LBD16                                                                 <---------GLK1(2) <-----------GT1              <-------TEIL                                    <---------WOX13(1)--------->ATHB51             --------->GLK1(2)         *TSS        --------->ANAC46       --------->LBD16     <------NtERF2      ----------->GT1             --------->YAB1 <---------At4g35610 <---------ANAC58       <--------    <------------CBF   ----------->RAV1(2)       --------->At4g35610 <---------ANAC58<-----------GT1< ---------MYB59   <---------MYB52(1)  --------->AHL20(2)   <---------YAB1<---------LBD16 <---------REM1(2)   ggcctaaattgtaagattcagttacttctgagcctctgataaaaatacttcatcagccatattgatagattccttcccggcattatttctctactcggcg  21537800                 --------->O2             ------>NtERF2           <---------ANAC58           <---------ANAC46           <---------ANAC58                                                                  <-------MYC3           <---------RAP2.6(2)                                                               ------->MYC3  <------NtERF2  <---------O2      --------->ANAC46                           --------->AtMYB61 ----- <---------ORA47(2)                --------->ZAT6                       --------------------->WRI1 -DEAR3(1)<---------LBD16   <---------ARR11(3)              --------->ZAT6    <---------ALFIN1 ------ ---------DEAR3(1)          --------->ARR11(3) <---------ATHB12     ------>ZmHOX2a(1)   -------->P   agtcggcgaaattgcggccacgagaacgaagagcttcacactacctccaatggtgttctctaactctctcctctcttcgaccacttcgcttaccacatgg  21537900                                                                                             <-------                                                                                             <-------      --------->ATHB12                                                                      ---------     <---------AHL20(2)                                                                --------->DAG2 <---------ATHB51                                                                     ---------->DOF2 --------->AHL20(2)                                                                 --------->At5g28300 <---------AHL20(2)                                    ---------->DOF2            <---------TOE2(3) ---->At5g28300------>ZmHOX2a(1)                    <---------ZAT6              --------->MYB52(1) ----->GT1  ---------->ID1                    <----------DOF2     <----------DOF2<---------At5g28300   taaataattcatttgtccttgtgccttctcgcttagagttttctaagccttttagtgaaaagcttagtcttttggtatcaaattacggtaaagtagctta  21538000                                                                                <---------At4g35610                                                                                --------->At4g35610                                                                               <---------MYB46(3)                                                                             <-------GAMYB                                                                           <---------AtMYB61                                                                         <---------ANAC58                                                                    <----------DOF2                                                                   <---------ANAC58                                                                   <---------ANAC58                                                              --------->ALFIN1<--------P                       <---------At4g35610                 <---------TOE2(3)<---------MYB46(3)     ------>ZmHOX2a(2) --------->At4g35610         <---------ARR14(2)    <---------ANAC46 --ANAC58     <---------ANAC46            --------->ICU4 ---------->DOF2 <---------ANAC58 --ANAC58     <---------ANAC58       ----------->GT1 ----------------->AG<-----------RAV1(1) >At4g35610   <---------ANAC58  ------->TEIL       --------->ARR14(2)  <---------ANAC46   agtttgatccaaggtgacttgatttagctcaatgtatttctgtaaatattgaatatccaaaaaggtttggcttttgtgtggttgctgaatttgtgatttt  21538100                                                                                      --------->ANAC58                                                                                      --------->ANAC46                                                                                      --------->ANAC58                                                                                    ---------->DOF2                                                                                   <---------ARR14(2)                                               --------->CCA1(2)                   --------->ARR14(2)                                              --------->ARR11(3)                --------->YAB1                                              <---------ARR11(3)          --------->ANAC58                                           --------->LBD16                --------->ANAC55(1)                            <-----------HVH21 --------->ARR14(2)          --------->ANAC46   --------                      <---------ARR11(3)  --------->LBD16                 <---------ANAC55(2)--------                  --------->YAB1          --------->ANAC46                --------->ANAC55(2)--------                 <---------ATHB12        --------->LBD16                  --------->ANAC58   --------               --------->WOX13(1)       <---------LBD16                  <---------TOE2(3) <---------             <---------ATHB12--------->WRKY18(1)             ----------------------->TaNAC69(2)   gggttttcagggcaaatcaatcaagttctcagtcaagtctttccccgagatattcgacatggcagtgtgtttgtttacgtaatcagaaacgcaaacctaa  21538200  Previous    Next  AGI:  At5g53070.1    Description:  ribosomal protein L9 family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO48633.1); contains InterPro domain Ribosomal protein L9; (InterPro:IPR000244); contains InterPro domain Ribosomal protein L9 N-terminal-like (InterPro:IPR009027) Range:  from: 21535819    to: 21537647    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g53080.1    Description:  kinesin light chain-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO48634.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 21537739    to: 21540492    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version