Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                  <--                                                        ----------->GT1                           <--                                             <---------ANAC55(2)                                  >>>              --------------->AGL15          --------->ANAC55(2)   ----------->GT1                <--              <---------------AGL15        --------->AHL20(2)  <---------AHL20(2)                 ---  <---------RVE1(1)                        <-----------GT1    --------->AHL20(2)   ----------->GT1<-- <---------ARR11(3)                    --------->AHL20(2)<-------GAMYB        <---------AHL20(2)  >>> --------->ARR11(3)             --------------->AtSPL8  <---------MYB46(3)    --------->AHL20(1)  <-- ------ZmHOX2a(1)               <---------------AtSPL8<---------LBD16         --------->AHL20(2)  --- ----->DOF2  ----------------->AGL2    <---------AHL20(2)--------->At5g28300 --------->AHL20(2)   <-- ----AHL20(2)----------------->AGL3 ------->TEIL      --------->LBD16        <---------AHL20(2)  <---   aaggattttttgttttccaaaaacagttttagtatatgtacttaattacataataccgcggttaataaatagttaaaaattaaattagaaaaaaacacat  21531900     <---------ZAT14   --------->ETT(2)   <---------ETT(2)                                         <---------ICU4 ------>ANAC55(2)                                           --------->YAB1 -------ANAC55(1)                                        --------->YAB1 -------ANAC58                                           <-----------GT1 >>>>>>>AREB2                                            --------->WOX13(1)              --------->AHL20(2) -------O2                                         <---------ANAC58                      <---------AHL20(2) ------>O2                                         --------->ANAC55(2)        --------->YAB1   <----- -------TGA1a                --------->ANAC58      <---------ANAC55(2)   --------->ANAC55(2) <------- >>>>>>>AREB1                --------->ANAC58      <---------ANAC55(1) <-----------GT1  <---------AHL20(2) -------ANAC55(2)            ----------->GT1       <---------ANAC58 <---------ICU4   --------->AHL20(2) ------>TGA1a                --------->ANAC46      <---------ANAC46--------->ICU4    --------->AHL20(1) -------ANAC58             --------->ZAT6     <---------MYB46(3)   <---------YAB1    <---------AHL20(2) ----TEIL         <---------ANAC46          <---------WOX13(1)<---------CCA1(2)     --------->AHL20(2)   acgtgtctacagttttagtctcgtacataacacgaaaaatcatctaattggttacgtattaatcatatcatttttacctattagaaaaaaattatttata  21532000                            --------->ZAT18                       <---------TGA1a                       --------->TGA1a                       <---------ANAC58                       --------->O2                       <---------bZIP60(1)                       <---------ANAC46                       <---------ANAC58                       <---------O2                       <---------ANAC55(2)                       --------->ANAC55(2)                                          --------->ATHB12                       <---------ANAC55(1)                                         <-------TEIL                    <---------MYB52(1)                                         <---------YAB1                   <-----------HVH21                                  <---------ARR11(3)                  <---------ANAC55(2)                                 --------->ARR14(2)            -                  --------->ANAC46                                    --------->ARR11(3)            <       <---------ARR14(2)   --------->At4g35610                       --------->GLK1(2)            --       --------->ARR14(2)   <---------At4g35610           <---------ICU4    ----------->TGA1       <- ------GT1        --------->ANAC55(1)           <---------ICU4        <---------ARR14(2)           <- --AHL20(2)       --------->ANAC55(2) <-------TEIL        <-----------GT1 --------->At4g35610      --   catttttagtatctactaatacgttacgtgagcacaaaaattcatcttcatcagtgctaataactatgcgaaaatctgatgacgattcatttgtctaaca  21532100                                                                                                    -                                                                                                    -       --------->TOE2(3)                                                                            -      --------->At4g35610                                                                           -      <---------At4g35610                                                                          -- -------->AHL20(2)                                                                               <--- ---------AHL20(2)                   --------->ANAC58                                            ---- ------->AHL20(2)                    --------->ANAC58                                            ---- --------AHL20(2)           <---------REM1(1)                                                    <--- --------AHL20(1)       <---------TOE2(3) <<<<<<<<<CBP60g    <----------ID1                    <----- ------->AHL20(1)      ---------->DOF2    <<<<<<<<<SARD1--------->AtMYB61                      ------   atttatttagcttaatacgagtttttaaagatgaagcatacccaaatttcccaagagaccaaaacgacaacgtttgggagtagctaatatcgtagttagc  21532200         --------->YAB1     <---------MYB52(2) -------->ANAC58 -------->bZIP60(2) -------->ANAC58 -------->ANAC46 ------->SPL7                                                <----------DOF2 ------ZAT18           --------->ANAC58                     <---------ANAC58 ----->ZAT18           --------->ANAC58                     <---------ANAC58                        - ----->ZAT14        --------->ZAT14                    <----------DOF2                             -- ------SPL7         <---------ZAT14                 *TSS   ---------->ID1    ---------->DOF2  ------- ----At4g35610   <------------CBF                  --------->DAG2           <------ZmHOX2a(1) ------- --->At4g35610 --------->MYB46(3)  --------->ZAT14---------->DOF2     <-------TEIL            -------   gcacgccactaacatcacccattgcacggtctctctctactctcaaacttcaaaaagctttggctttttagattcacaggaaagaaccctcaaaacacac  21532300                                                                                              <------                                                                                              <------     ----------->GT1      <---------ARR14(2)                                                  ------- -------->DAG2            --------->ARR14(2)                                                --------- -------->DOF2      --------->ZAT14                                                       --------->LBD16 -->ANAC58          <---------ZAT14                         <-----------GT1             <---------LBD16 -->ANAC46      <---------AtLEC2 ------>NtERF2    --------->GLK1(2)                   <---------WRKY18(1) -->ANAC58<---------YAB1  <---------GLK1(2)      --------->KAN4(2)           ------>ZmHOX2a(1)-------   aaaaagctggtgatttttgcattgcaccgattcgcctccatcgattttggacattcttgaattctccctccaagtattcctgtgaaattgaccggaaagt  21532400                             --------->ANAC58                             --------->ANAC58                           ---------->DOF2                 --------->LBD16          <---------------AGL15    <---------DAG2--------->At5g28300                                 <----------DOF2    <----------DOF2   ---------->DOF2                             <---------ZAT18 ---HSFC1(2)     ----------->GT1           --------->ZAT14   <---------ANAC46 ---HSFB2a(1)   <---------HSFB2a(2)  <---------ANAC58        <---------ANAC58                   ----- -->HSFB2a(1)   --------->HSFB2a(2)  <---------ANAC58        <---------ANAC58                   <---- ->DOF2  ----------------->AGL1     --------->MYB59     --------->HSFB2a(2)               --------->TOE1(2) -->HSFC1(2)   <---------LBD16  --------->ATHB12        <---------HSFB2a(2)     ------>ZmHOX2a(1)  --   tccttcctttttcaatttccggtaaaaaggaaagtaattgggtactgtagacttccttctagggcttgtgaactttctaatccttcagaaaaccctcgaa  21532500                                                                                            <------ZmHOX2a(2)                                                                                            ---------                                                                                           --------->ARR14(2)                                                                                           <---------ARR11(3)                                                                                           <---------ARR14(2)                                                                                           --------->AGP1                                                                                      <------ZmHOX2a(2)                                                                                      --------->CCA1(2)                                                                                     >>>>>>>>>GATA-1                                                                                     --------->AGP1                                                       <---------LBD16               >>>>>>>>>GATA-2                                                 <XXXXXXXXXXXXXXXXXXXXMIR2112-5P     >>>>>>>>>GATA-4                                               <----------DOF2                       --------->ARR11(3)         --------->At4g35610            --------->CCA1(2)                            >>>>>>>>>GATA-3 ---->ARR14(2)      --------->YAB1     --------->ARR11(1)                            <---------ARR11(3) -----ARR14(2)     ----------->GT1 ---------->DOF2  <---------GLK1(1)               --------->GLK1(1) --------->GT1    <---------WOX13(1)   <---------ARR11(3)            <---------AHL20(2)------>ZmHOX2a(2)   ttcgaaaaatttgctgcgagattgataaatgactagttaaagatttgaactttgatttctgggtttgcgattttattcaaatggagagatctagatccaa  21532600                                                                                          <---------ANAC46                                                                                          --------->ALFIN1                                                                                          <---------DEAR3(1)                                                                                         <------NtERF2                                                                                         --------->At4g35610                                                                                         <---------At4g35610                                                                                         --------->ATERF1(1)                                                                                         <---------ABI4(1)                                                                                         <---------LBD16                                                                                        <---------ERF1                                                                                        <---------ATERF1(1)                                                                                        <---------RAP2.3(1)                                                                                        <---------ORA47(2)                                                                                        ------>NtERF2                                                                                        <---------RAP2.6(1)                                                                                        <---------RRTF1(1)                                                                                       <---------ANAC46                                                                                       <---------RRTF1(3)                                                                                       <---------ANAC58                                                                                       <---------ATERF1(2)                                                                                       <---------RAP2.6(2)                                                                                       --------->ATERF1(2)                                                                                       <---------RRTF1(2)                                                                                       <---------RAP2.3(3)                                                                                       <---------DREB2C(2)                                                                      <-----------GT1  <---------ANAC58                                                                   <--------ATHB1      <---------RAP2.3(2)                                                                   <---------ICU4      <---------DEAR3(1)                                                                   --------->ATHB51   <---------ABI4(1)                                                                   <--------HAHB4     <------NtERF2                                                                   --------->YAB1     --------->ATERF1(1)                                      --------->AtLEC2            --------->ICU4     <---------ATERF1(1)                                    <---------ANAC58              <---------ATHB12   <---------ERF1                                    <---------ANAC58              --------->AHL20(2)<---------DEAR3(1)                                 --------->GLK1(2)                <---------ATHB51  --------->ALFIN1                               <---------HSFB2a(1)              --------->YAB1     --------->ATERF1(1)                               --------->HSFB2a(1)           ----------->RAV1(1)  <---------MYB46(3)                               --------->HSFC1(2)           --------->REM1(1)    <---------AtMYB61       --------->ZAT6      <---------ANAC46            --------->ANAC58          --------->ALFIN1   -     -------->P           <---------LBD16              --------->ANAC46       <---------AtMYB61<----- >CCA1(2)               ----------->HVH21              --------->ANAC58     <----------DOF2 <------NtERF2   gagaaactaccactatgaccaagactatgacggagattccatgcctaggtctaaacctcgctacaacaataattaccactttggtggtggcggcggagga  21532700                        --------->MYB55(2)                        <---------MYB46(3)                       <---------AtMYB61                      <-------GAMYB                      <------NtERF2                      <---------ABI4(1)                     <---------MYB46(3)                    <---------DEAR3(1)                    <---------DREB2C(2)                    <---------ANAC46                    <---------AtMYB61                    --------->ALFIN1                   <---------ABI4(1)                   <------NtERF2                   --------->ATERF1(1)                  <---------RRTF1(1)                  <---------ATERF1(1)                  ------>NtERF2                  <---------DEAR4(2)                  <---------RAP2.6(1)                  <---------ERF1                  <---------ORA47(2)                 <---------RAP2.6(2)                 <---------RAP2.3(3)                 <---------RAP2.3(2)                 <---------RRTF1(2)                 <---------ATERF1(2)                 --------->ATERF1(2)                 <---------RRTF1(3)                 <---------ANAC46                 --------->ALFIN1                 --------->DEAR3(1)                 <---------DEAR3(1)                --------->DEAR4(2)                --------->At4g35610                <---------At4g35610                --------->RAP2.3(1)                --------->DREB2C(1)                <---------ABI4(1)                <------NtERF2                --------->ATERF1(1)               <---------ORA47(2)               ------>NtERF2               <---------ATERF1(1)               <---------RAP2.6(1)               <---------DEAR4(2)               <---------RAP2.3(1)               <---------ERF1               <---------RRTF1(1)              <---------ANAC46              <---------RRTF1(3)              <---------ANAC58              <---------RRTF1(2)              <---------ATERF1(2)              <---------DREB2C(2)              <---------ANAC58              <---------DEAR3(1)              --------->ATERF1(2)              <---------RAP2.6(2)              <---------RAP2.3(3)              <---------RAP2.3(2)           <------NtERF2             --------->ATERF1(1)           ------>NtERF2             <------NtERF2                 --------->ANAC58             <---------ABI4(1)             --------->ANAC58           --------->ALFIN1               <---------DEAR3(1)           <---------DEAR3(1)             <---------RAP2.6(2)         <---------ANAC58                 --------->ATERF1(2)         <---------ANAC58    <---------AtMYB61         <---------ANAC46 --------->ALFIN1<---------ATERF1(2)       <---------At5g28300<---------ANAC46--------->DEAR3(1)     --------->ARR14(2)<---------DEAR3(1) --------->RAP2.6(2)               --------->MYB46(3)   <---     <---------ARR14(2)--------->ALFIN1  <---------ANAC58     ------>ZmHOX2a(1)               ------>ZmHOX2a(1) -------->MYB52(1)<---------RAP2.3(1)    <---------ANAC58     --------->LBD16             <---------ARR14(2) -ZmHOX2a(1)<---------ATERF1(1) --------->ALFIN1            ----------->RAV1(2)           --------->ARR14(2)   aataacagataccgtggcggcggcggtggtggaggtggaaatggccggccatcgaagtctcatcctgaaacgatggcaacaacgacttatcgaatcctct  21532800  Previous    Next  AGI:  At5g53060.1    Description:  KH domain-containing protein. similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G15270.1); similar to KH domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G15270.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO48632.1); contains InterPro domain K Homology; (InterPro:IPR004087); contains InterPro domain K Homology, type 1; (InterPro:IPR004088) Range:  from: 21532252    to: 21535663    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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