Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------At4g35610                                                   ----------->RAV1(2)                                                   ================================HOX2a_HOX2a                                               --------->ARR14(2)                                               <---------ARR14(2)                                          --------->ANAC58                                          --------->ANAC58            --------->ANAC46          ------>ZmHOX2a(2)         <------NtERF2            --------->ANAC58          ====================HOX2a_HOX2a              <---------DEAR3(1)           <---------LBD16           =====================HOX2a_HOX2a          ----------->RAV1(2) ------NtERF2                        <------ZmHOX2a(2)        <---------DEAR3(1) --------->LBD16 ------->LBD16                      <---------ARR14(2)      <-----------HVH21  <---------LBD16 --------CDC5    <---------AtMYB61  --------->ARR14(2)  <---------ZAT2        --------->MYB52(1) ------LBD16--------->ANAC55(2)     --------->ARR11(3)  --------->ZAT2      <------ZmHOX2a(2) -----ANAC46--------->ANAC58        <---------ARR11(3)  <---------At4g35610<-----------HVH21 ->DOF2<---------------AtSPL3     ----------->ARR10------>ZmHOX2a(1)--------->CCA1(2)<------NtERF2   gcggagcaatttgtacggaatggtgttcttcgagcgaagatcggaagcaattcctctgagctcgtcggagagacgacgatcaccggaggcgagagcgaga  21500800                   <---------ANAC58                   <---------ANAC58                  <---------LBD16                  <-----------------------TaNAC69(2)                --------->ALFIN1            --------->ZAT14            <-------TEIL            <---------ZAT14                             <--------P                                  <         <---------MYB46(3)                         <---------ANAC46                                <       --------->At4g35610                        <-----------HVH21                     <---------TOE2(3)       <---------At4g35610 --------->GLK1(2)   <---------ANAC58                       ----------->HVH21       <------NtERF2 <------NtERF2             <---------ANAC58         ------>ZmHOX2a(2)       <----   ------>ZmHOX2a(2)--------->LBD16           <---------LBD16     <----------DOF2   <---------ANAC55(2)  <------ZmHOX2a(2)<---------ANAC46          <-----------GT1 ------>ZmHOX2a(2)      --------->ANAC55(2)   aacgatcgcagcggttcagtggcggagagaatcagaccagagccatttttcgggtcgggttgatccatctttgatcgggtccaaacacttgacgttgttc  21500900              --------->LBD16             --------->ANAC46            <---------LBD16        <---------ARR14(2)        --------->ARR14(2)        <-----------ARR10      <---------MYB46(3)      <------MYB46(1)      <------MYB83                                     <------MYB46(1)      <---------DEAR3(2)                        *TSS   <------MYB83     <---------DEAR3(1)                     <---------AHL20(2)                                     <-    <--------P------>NtERF2                <---------AHL20(1)                                      <-   --------->ARR14(2)                      --------->AHL20(2)                                      --   <-----------HVH21                       --------->ARR11(3)                                      <-   <---------ARR14(2)                   --------->AHL20(2)                                         <-  <------NtERF2                       --------->AHL20(2)                                           -- <---------MYB46(3)                  --------->YAB1   --------->MYB59                           ----- ---------ANAC58         --------->ANAC58  <---------AHL20(2)                                   ----- ---------ANAC58         --------->ANAC58  --------->AHL20(1)   <---------ANAC46              <------ -------RAV1(2)          --------->ANAC46  <---------ARR11(3)----------->HVH21       --------->ANAC46   aggcgggtcggttctccgcgatgttttaagcaacgtccaaaataatatatttggattaggtccctgacttatacaagtatcaaatacaagactcttatcc  21501000                                   <-------MYC2                                   ------->MYC2                                   ------->PIF4                                   ------->MYC3                                   <-------MYC4                <---------ANAC58   ------->MYC4                <---------TGA1a    ------->PIF5                --------->O2      --------->O2       --------->ICU4             <---------ANAC55(2)         ---------->DOF2   ------------>CBF               <---------TGA1a           --------->ANAC58 --------TGA1a  <---------ANAC55(2)<-------PIF4             --------->ANAC58 --------bZIP60(2)                --------->TGA1a          <------NtERF2 ------->O2     --------->ANAC55(2)<-------MYC3           ------>NtERF2               --------->TOE2(3) --------O2     <---------ANAC55(1)<-------PIF5          --------->DEAR3(1)          --------->YAB1 --------ANAC46 <---------ANAC46  <---------O2      --------->MYB52(1)               ----------->GT1 ------->TGA1a  <---------O2      --------->ANAC55(2)<---------At5g28300            <---------YAB1 ---->ANAC46    --------->TGA1a   =======================================bZIP_DOF   <---------TOE2(3) ------>HVH21  <-------TEIL      ------------>OsbHLH66   <---------DEAR3(1)      <---------YAB1   --- -----------AGL1<---------ANAC58<------------OsbHLH66<---------LBD16     --------->ALFIN1        ----   gacgtggcaatatttgatacgtggcattaccctagcacgtgtgaattactcgaatcacggcgacgaaagcttagtatgggggtattatcgtaaatttcaa  21501100                                                                        ------>ZmHOX2a(2)                                                                       --------->GLK1(1)                                                      *TSS            <---------ARR11(3)                                                     <---------ANAC46 --------->ARR11(3)                                                     <---------ANAC58<---------ICU4                                  ------->TEIL       <---------ANAC58--------->YAB1                                 <---------CCA1(2)<---------MYB52(1)--------->ICU4                        <------------CBF        <---------ANAC58  <---------ICU4                 <---------AHL20(1)             <---------ANAC58  --------->YAB1            ---------         --------->AHL20(2)    <----------DOF2 ---------->ID1    --------->ICU4             --------- ------>DAG2     --------->AHL20(1)           <-----------GT1    <---------ATHB12       <-----------GT1 ------>DOF2     <---------ARR11(3)      <----------DOF2         <---------ATHB51  <---------MYB52(1)   aaagtgagtcattaaacaaaatattctattgggctgtatctatctttttttcgtttcgtcttctccaataatgatctccatttctgttattttccctaga  21501200                                                                                         ---------->DOF2                                                                                      <---------HSFB2a(2)                                                                                      --------->HSFB2a(2)                                                                                      <--------------                                                                                 ------->TEIL                                                                              <---------ANAC55(2)                                                                              --------->ANAC55(2)               ---------->DOF2                                             ==========================          ===========================================================================================          --------->TOE1(3)        <---------ARR11(3)                      <------ZmHOX2a(2)          --------->TOE2(3)        --------->ARR11(3)                     --------->ARR11(3)        - >LBD16   <---------------AGL15   --------->RVE1(1)                       <---------ARR11(3)        < ------------>WRI1          --------->YAB1                          ---------->DOF2   ---------------   aattttcgcaaaccctaaaaagagagagaaacataaaaatctccattgaaacagattggattgagcaagagaaagagatcatgtatttctaaaaagagag  21501300               ==========================HOX2a_HOX2a               =========================HOX2a_HOX2a               ------>ZmHOX2a(1)          --------->GLK1(1)     ====================================HOX2a_HOX2a     ===================================HOX2a_HOX2a     ------>ZmHOX2a(1)     =============HOX2a_HOX2a --------->ARR14(2)                                --------->ATHB12            <----------DOF2 -AGL15   <---------GLK1(1)                       --------->ICU4         ------>ZmHOX2a(2) ===========HOX2a_HOX2a                --------->ATHB12        --------->TOE2(3)      ---------->ID1 =MADS_MADS------>ZmHOX2a(2)           <---------ICU4          --------->TOE1(3)     <-----------GT1 -------->GLK1(1)                 ------>ZmHOX2a(2)<---------ICU4       <------ZmHOX2a(2) ---------GLK1(1)                <------ZmHOX2a(2)<---------YAB1       --------->ARR11(3)       ----- >AGL15  --------->ARR11(3)     <---------ARR11(3)<---------ATHB12     <---------ARR11(3)       =====   agaaatcctctgatctcctctctgattcgatcgagatcgcatcatttccctaatgatttcaaaaacctaaaacgatctcttcttttttttcgcttcgatc  21501400            --------->ATHB12                             <---------ARR14(2)           <---------YAB1                                --------->ARR14(2)   --------->MYB52(2)         <------ZmHOX2a(1)            <---------ZAT18 --------->ANAC58     --------->GLK1(1)     ---------->DOF2                  <---------ZAT14 --------->ANAC58   <------NtERF2 ->ZmHOX2a(2)                       <---------SPL7  ---------->DOF2     --------->LBD16           <-- ===============HOX2a_HOX2a    <---------YAB1<---------AtLEC2         <---------LBD16          <-----   tccattgaaaaggatgatttcaaatccaagtttattatcgtacacttgcattgcgaaaggaaccgtagttctcgcggagttcgtttcaaggcaagagcca  21501500                                             <---------ICU4                                            <---------YAB1                                            <---------ATHB12                                         ------>ZmHOX2a(1)                                      ------>NtERF2                                  --------->ANAC58                           <---------HSFB2a(2)                           --------->HSFB2a(2)--------->WOX13(1)                        ------->TEIL --------->DEAR3(1)                        <---------ANAC55(2)                      <-------TEIL--------->ANAC46                             <---------ANAC46              <----------DOF2     --------->ANAC58                  <---------ZAT14      --------->ANAC58 ----ZmHOX2a(1)      ----------------------->TaNAC69(2)             <---------ZAT18      --------->ANAC46 ------RAV1(2)<---------DAG2      --------->ANAC55(1)               --------->ZAT14      --------->ANAC58   ggaatcgaagctatagctttacgatgcatcgagaacacgcctcctcatcattcaatgttttctcatacagttcacaagaagacgtatacattcgcaatcg  21501600                                                                                                <----                                                                                               ------                                                                                              <------ZmHOX2a(2)                                                                                              -------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <-------                                                      --------->YAB1                         --------                                                      <---------ICU4                         <-------                                  ------->TEIL       <---------ATHB12                        <-------        <----------DOF2      <---------At4g35610--------->TOE2(3)                  --------->At4g35610  --------->HSFC1(2)         --------->At4g35610--------->TOE1(3)                  <---------At4g35610  --------->HSFB2a(1)   <---------GLK1(1)      ----------->RAV1(2)              <------ZmHOX2a(2) <---------YAB1     --------->HSFB2a(2)--------->AtLEC2                        --------->ARR11(3)   acgatgattcctttgtttatttctcgatttctgatgaatccatggagaaacctgaatcattctgggttttgaatcgtttgagatcagctattgaagatct  21501700  Previous    Next  AGI:  At5g52980.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO63390.1) Range:  from: 21499386    to: 21500948    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g52990.1    Description:  vesicle-associated membrane protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G27840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO48644.1); contains InterPro domain Longin-like; (InterPro:IPR011012) Range:  from: 21501154    to: 21502513    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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