Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                               ------                                                                                               <-----                                                                                              =======                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              -------                                     --------->WOX13(1)                                       <------                              <-------PIF5                                                    <------                              <-------MYC4                                                   --------                              <-------MYC3                                                  ------>NtERF2                              ------->MYC2                                                 --------->DEAR3(1)                              <-------MYC2                                               --------->At4g35610                              ------->MYC3                                               <---------LBD16                              ------->PIF5                                               <---------At4g35610                              ------->MYC4                                               --------->LBD16                             --------->O2                                --------->GLK1(2) ----------                             <--------ABF1                              <---------GLK1(2)------>NtERF2                             <---------TGA1a                            --------->ARR14(2)--------->ATERF1(1)                             --------->TGA1a                            <---------ARR14(2)<------NtERF2      <------ZmHOX2a(1)      <---------O2                             ----------->ARR10 --------->DEAR3(1) -------->AGL15    <-------GAMYB <---------CCA1(2)              --------->MYB46(3)     --------->ATERF1(1) ---------AGL15    ====================MYC_MYB                --------->MYB52(1)      <---------At4g35610 --ANAC58    <---------ANAC58<---------ANAC46               --------->MYB46(3)        --------->At4g35610 --ANAC58    <---------ANAC58<---------ANAC55(2)         <---------CCA1(2)      ------>ZmHOX2a(1)   aagaagtaggagaaggcttgctgttaaggccacgtgtatcaatcttctccgatgttgttgtatccaacggctcagattcttcctcggtagccgcggacgt  21470600                               --------->ANAC58                               <---------ANAC55(2)     <-----------------AGL1    --------->ANAC55(1) <----------DOF2               --------->ANAC55(2) ---->ALFIN1                   --------->ANAC46 ->PIF5                        --------->ANAC58 --PIF5                       <---------LBD16 ===========bZIP_DOF        <---------REM1(2)     <---------ZAT14 -->O2                      <------NtERF2         --------->ZAT18 ---ANAC58                  <---------MYB52(1) <---------ANAC46 ---bZIP60(2)               ----------->HVH21  <---------ANAC58                 <----------ID1 ---TGA1a                  <-----------HVH21   <---------ANAC58             ---------->DOF2 ---ANAC46                 <---------RAP2.6(3)<------NtERF2              <------NtERF2 -->TGA1a                  <-----------TGA1  <---------RAP2.3(1)     <-----------HVH21 ---ANAC58                --------->RAP2.6(2)<---------DEAR3(2)  ------>ZmHOX2a(2) ---O2              <---------ANAC55(2)      ------>NtERF2     <---------ARR11(3) ->SPL7           --------->MYB52(1) --------->ARR11(3)---------->DOF2 <---------DEAR3(1) ->HVH21    --------->DAG2--------->ANAC46  <---------DEAR3(1) --------->ARR11(3)--------->CCA1(2)   gggctttaatcgataaggcataacgtagccgtcacggaagagctcgtcggcgtgaactaaagagtgatcttcgtcggagaaagagacgaagttatcgaac  21470700                                              <------NtERF2                                             --------->ANAC58                                             --------->ANAC58                                           <------ZmHOX2a(1)                                           ======================HOX2a_HOX2a                                           =====================HOX2a_HOX2a                                     --------->HSFC1(1)                                     <---------HSFB2a(2)                                <---------HSFB2a(1)                                --------->HSFB2a(1)                                --------->HSFC1(2)                                <---------HSFC1(2)                               <---------ARR14(2)                               --------->ARR11(3)                               --------->ARR14(2)                  <---------ATHB12                <---------ARR11(3)   <---------HSFC1(1)   ------>ZmHOX2a(2)                --------->ARR11(3)   --------->HSFB2a(2)  <-------TEIL<---------TOE2(3)           <--          --------->YAB1       --------->GLK1(2)         <------ZmHOX2a(2)                       <---       <----------DOF2         <---------ARR11(3)       <---------ARR14(2)     >>>>>>>>>TBF1     <---  <---------At4g35610         <---------GLK1(2)         --------->ARR14(2)  >>>>>>>>>TBF1------->TEIL   ttgaagctactttcatgagatgttttgatgaagaatcttctagaaggaggcaatcttggatccatctcaatgaaggaagaagaagaagatgaatcttcgt  21470800           <---------YAB1          <---------ARR11(3)          --------->ARR11(3)                        ------>MYB83         --------->YAB1                            --------->MYB52(1)        <---------YAB1                            ------->GAMYB        --------->ICU4 <---------At4g35610      -------->P      --------->ZAT2      --------->YAB1   --------->HSFC1(2)      --------->MYB52(1)     <---------YAB1    <---------HSFC1(2)    <---------MYB52(2) --------->At4g35610     --------->ICU4  <--------P        ----------->GT1          <---------At4g35610                 < -------YAB1--------->YAB1   ---------->DOF2 <---------MYB46(2)--------->GLK1(2)                    < ------TOE1(2)     --------->YAB1    ---------->DOF2------>MYB46(1)                         <-------- ------TOE2(2)<---------YAB1<---------------AGL15--------->MYB46(3)<-----------HVH21        ---------   atgtttgatgatgatcatcaatggtagcttctaaagaaggaaagttaactaaccaactgtaagagaagctgtcaattggaactagtggcattgaagcttc  21470900                                                                           --------->At4g35610                                                                           <---------At4g35610                                                                         --------->ZAT18                                                                        <---------ANAC58                                                                        --------->ALFIN1                                                                        <---------ANAC58                                                                    <---------ANAC58                                  <---------AHL20(2)                <---------ANAC46                                 --------->AHL20(2)                 <---------ANAC58 ---------ANAC58          <----------DOF2                   <-----------RAV1(1) ---------ANAC58   <---------At4g35610   <----------DOF2  --------->GLK1(1)<---------ZAT14 -HSFC1(2)       <---------RAP2.6(2)     <---------DAG2  <---------ARR14(2)--------->ZAT14 >HSFC1(2)  <---------AtLEC2     <---------AHL20(2)      --------->ARR14(2)--------->ZAT18  <--------   ttgcttaccttcttccatggctgcttctctttttttttaatagcttttttttgttatgggatatgttgttgagtgtgtgcagagaaatttgtttgagaca  21471000                                                                                 --------->MYB52(1)                                                                             <---------AHL20(2)                                                                             --------->AHL20(2)                                                                            <---------AHL20(1)                                                                            --------->AHL20(2)                                                                       <---------AHL20(2)    --------                                                                       --------->AHL20(2)    <-------                                                                  --------->AHL20(1)         --------                                                                  <---------AHL20(2)       ----------                                                                  --------->AHL20(2)      <---------AHL20(1)                                                                  <---------AHL20(1) --------->At5g28300                                                                 <---------AHL20(2) ------->GAMYB <--                                     <-----------TBP             --------->AHL20(2) ----------->GT1    <---------AHL20(2)             <-----------TBP         --------->ANAC46 <---------AHL20(2)    ---    --------->AHL20(2)             --------->AHL20(2) --------->ARR14(2)    --------->AHL20(1)   ---- --ID1                            *TSS                <---------ARR14(2)<---------AHL20(2)--------->AHL20(1)   aaacaattttttgaattgggaacatatgtttcagtgtttatatatagagagggacatatacacataattttattttaatttaataacggtaatatataaa  21471100                                               ----------->GT1                                              ------------------------>ANAC81               ----------->GT1        --------->ATHB51               <------MYB46(1)        --------->ATHB12          --------->MYB52(2)          <---------ICU4        <---------MYB52(1)            -------->HAHB4       <-------GAMYB                  <--------ATHB1      ----------->GT1                <---------ATHB51 --->TBP<--------P     ------------>CBF     ---------->DOF2 --AHL20(2)   --------->MYB46(2)     <---------AHL20(2) ->AHL20(2)   --------->MYB59        <---------YAB1                    --------->TOE2(2) ->TBP<---------MYB46(3)      <---------ARR11(3)----------->GT1        --------->TOE1(2) -------AHL20(1)   --------->ANAC58  --------->ICU4       ---------->DOF2 ------>AHL20(1)   --------->ANAC58--------->YAB1    ---------->DOF2  --------->YAB1           ------ ----->AHL20(2)<------MYB83   --------->ARR11(3)<----------ID1 ---------->DOF2                <------   tatatatgtggttagtttggtaagaaacaatagatattaataattggaaagggaaaaaagaaaagaaaagaaacataagagtttgtgagcccatactaac  21471200                                                                                                -----                                                                                         <----------TaMYB80                                                                                        <---------AHL20(1)                                                                                        <---------AHL20(2)                                                                                        --------->AHL20(1)                                                                                       <---------AHL20(2)                                                                                       --------->AHL20(2)                                                                                       --------->YAB1                    <---------ALFIN1                                               <---------YAB1  --                <---------ANAC58                                                   --------->AHL20(2)            <---------At4g35610                                                    <---------AHL20(2)            <-------GAMYB <----------DOF2                <----------DOF2          --------->AHL20(2) --------->YAB1 <---------ANAC58   <XXXXXXXXXXXXXXXXXXXXXMIR855                   <---------AHL20(2)< -->P      <-----------RAV1(1) <----------DOF2        <-----------GT1      ----------->GT1     ------ -----GT1  <---------MYB46(3)<------------------------ANAC81  <----------DOF2   <---------YAB1<------   ctctcattatgtgctgttgccttcactcctttcctttttttttttagtttttgttttctcttttcttttcgaatatagggttattttaattatattcccg  21471300                 <---------YAB1                 --------->AHL20(2)                 <---------AHL20(2)           <---------AHL20(2)               <---------bZIP60(1)           --------->AHL20(1)              ----------->STF1                <---------AHL20(2)          <---------AHL20(2)    <---------YAB1                            <---------AHL20(2)          --------->YAB1      --------->YAB1--------->bZIP60(1)      <---------YAB1       <---------ICU4        ================================HOX2a_HOX2a  --------->AHL20(2)      --------->ICU4         <------ZmHOX2a(2)             --------->HSFB2a(2)      <---------YAB1        --------->ARR11(3)--------->DOF5.7(2)  --------->ATHB12  ----------->RAV1(1) --------->MYB59      <---------TOE2(3)      --------->ICU4 ---->LBD16<---------AHL20(1)=====================================HOX2a_HOX2a ---->NtERF2    --------->AHL20(2)   <---------YAB1        ------>ZmHOX2a(1) ------NtERF2   <---------AHL20(2) --------->CCA1(2)  ------>ZmHOX2a(1) <---------YAB1 --->LBD16--------->AHL20(2)<---------ARR11(3)<---------MYB52(1)  <---------YAB1 ---LBD16<---------YAB1 <------ZmHOX2a(1)----------->TGA1  <---------HSFB2a(2)   gtggcaacataattatattttaattaggaagatcatgatatgaatgacgttatctcctctcctagagcatgattattttaatttgtttagagagttatcc  21471400                            <------------CBF                         --------->ANAC55(2)                   ------->TEIL       <---------ARR11(3)           ---------->DOF2                  <---------AtLEC2    --------->ARR11(3)      <---------WOX13(1)           <---------ARR14(2)        ---------->DOF2  <---------ANAC55(2)        <------------CBF               <---------YAB1  --   --------->YAB1<-------TEIL        <---------CCA1(2)     <---------YAB1  --------->ANAC46--------->ARR14(2)   acaaatcagaaaaagacgatgcatgttaagtattgacacatatctcatggaactaattgttttgatagacaaagaaaacacaactatgaaacgaatatgt  21471500  Previous    Next  AGI:  At5g52900.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO49548.1) Range:  from: 21469668    to: 21471034    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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