Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->HSFB2a(2)                       <---------MYB52(1)                  <---------HSFB2a(2)              ---------->DOF2                        <---------TOE2(3)                           ----        <---------ANAC58  <------MYB83               <---------TOE1(3)                       --------        <---------ANAC58  <------MYB46(1)          --------->MYB52(1)                        --------        <---------ANAC46 --------->MYB59          --------->ARR14(2)                         --------        <-----------RAV1(1)         <---------YAB1<---------ARR14(2)  --------->ATHB12   --------->CCA1(2)   agcgagtcttgtgtgggaaagatgtgttaggttaagctctgatagaagagaggttacggtttcagaaactattgatgggtttgggagcaagagacaagca  21438400                          <------ZmHOX2a(1)                   <---------DEAR3(1)             <---------ANAC46            <---------LBD16                                       <---------ARR11(3)            <---------HSFB2a(2)                         --------->TOE1(2)   <------ZmHOX2a(1)  --------->ALFIN1                 --------->ANAC58 ----->At4g35610----------->HVH21                <---------LBD16  --------->ARR11(3) ->ANAC58--------->ARR11(3)                  --------->ICU4    <------ZmHOX2a(1)     ----------->GT1 ->ANAC58<---------ARR14(3)                  <-----------RAV1(1)----------->ARR10<------ZmHOX2a(1) ->ANAC46<---------ARR11(3)         ---------->DOF2    --------->ANAC58 ----------------->AGL1   gcgaaggagaaggtctcggagacggtgaggagagggaagaaagagtcatgttggggaacgtaagaggagatttttcgataagaggaagggttaatgggaa  21438500                                                                             <------NtERF2                                                                            <---------SPL7                                                                            --------->LBD16                                                                          <------NtERF2                                                                          <---------LBD16          <-                                                                          --------->RAP2.3(1)      --                                                                          --------->ATERF1(1)      <-                                                                         <---------ERF1           <--                                                                         <---------RRTF1(1)       <--                                                                         <---------RAP2.6(1)      ---                                                                         ------>NtERF2            ---                                                                         <---------ATERF1(1)      <--                                                                         <---------RAP2.3(1)      <--                                                                        --------->DEAR3(1)        ---                                                                        <---------DEAR3(1)        <--                                                                       --------->ATERF1(1)        ---                                                                       --------->RAP2.6(1)       <---                               <------MYB83                            --------->RRTF1(1)    <-------                               <------MYB46(1)                         --------->ERF1  --------->MYB46(3)                              <---------AtMYB61                        --------->RAP2.3(1)  <------NtERF2                    <---------MYB52(1)                                ------>NtERF2 <---------WRKY12-                   --------->LBD16                                    <---------ATERF1(1)  ------>NtERF2                 <---------LBD16                                      <---------RAP2.3(1) <---------DEAR3(1)          <------ZmHOX2a(1)<---------ANAC46                           --------->LBD16  ----------->HVH21       <------ZmHOX2a(1)  <---------LBD16                            <---------RAP2.3(2)------->GAMYB     <---------TOE2(3)   --------->ALFIN1                            --------->ANAC46--------->MYB52(1)     <---------TOE1(3)  --------->ALFIN1         <-----------HVH21  <---------LBD16 <---------WRKY38(1)   tggagttaaggaggattgaaccggaagttggggaggttttagaggcgagaatgtcaaggagagttgattttccggcgccggaagggccaacgacggcgag  21438600       <---------MYB46(3)       <------MYB83       <------MYB46(1)     <---------MYB52(1)     <--------P    <-------GAMYB                                            ------>NtERF2   <---------MYB46(3)                                        --------->LBD16 -----ZmHOX2a(2)                                             --------->HSFB2a(2) ------->GLK1(1)                                             <---------HSFB2a(2) --------GLK1(1)                                            --------->LBD16 ---------ARR10                                             <---------LBD16 -------AGP1                            --------->DAG2     <---------LBD16 ------>ARR14(3)               <---------ANAC58            <------NtERF2 --------->ALFIN1 ------>GLK1(2)                <---------ANAC58            --------->ATERF1(1) -------ARR14(3)               <---------ANAC46           <---------RAP2.3(1) -------ARR14(2)              <---------LBD16     <------NtERF2---------->DOF2 ------>ARR14(2)          <---------REM1(1)      <---------MYB46(3)   --------->ALFIN1 -------ARR11(3)          <---------bZIP60(2)   <---------DEAR3(1)--------->At4g35610 ------>ARR11(3)--------->At5g28300    ---------->DOF2   <---------DEAR3(1)                       <-- ---ZmHOX2a(1)<---------DEAR3(1)    <------ZmHOX2a(1)  <-----------HVH21<------ZmHOX2a(1)         <-- --ANAC46    --------->At4g35610--------->LBD16 --------->ALFIN1  <---------At4g35610           <---- ----->ZmHOX2a(2)         <-----------RAV1(1) --------->ALFIN1<------NtERF2                    <-----   gatctcggttggatgagcggtgagagtgatgttgcggaggataaaggagggtggctcagtcgccgggaagcggaggagggagagagaggtttttggtatg  21438700                                            <---------ANAC46                                            <---------DEAR3(1)                                          ------>NtERF2                                          --------->LBD16                                        <---------LBD16                                      --------->ARR14(2)                                      <---------ARR14(2)                                     --------->ATERF1(1)                                    ------>NtERF2                                    <---------ATERF1(1)                                    <-----------HVH21                                   --------->RAP2.3(2)                                   --------->DEAR3(1)                                  --------->ORA47(2)                                  --------->DEAR4(2)                                  <------NtERF2<---------DEAR3(1)                                  --------->RAP2.3(1)                                  --------->ATERF1(1)                                 <---------ATERF1(1)                                 <------NtERF2 <---------AtMYB61                                 ------>NtERF2<------NtERF2                                 <---------At4g35610                                 --------->At4g35610                                --------->DEAR3(1)                          --------->REM1(2)<---------LBD16                  <-------GAMYB<---------RAP2.6(2)   <------ZmHOX2a(1)     --------->ALFIN1<---------DEAR3(1) -------ANAC46   ----------->GT1--------->RAP2.6(2) -------REM1(1)  <---------MYB46(3)--------->RAP2.3(3)       --------->GLK1(1) -----ANAC46    --------->ALFIN1<---------DEAR3(1)--------->ALFIN1 ----AtMYB61 --------->ALFIN1 --------->ATERF1(1) ----------->HVH21        ----------->GT1   *TSS   gtgtaggagattgaagaggtggttaatgtgtaggccgccgtctccggcggaggtgatggaggtatttccatagagaatggttctaagttctaacttgtaa  21438800                                           <---------TOE2(3)                                         <---------AHL20(2)                                     <---------YAB1                               <-----------TBP                                              ------>MYB46(1)                    <---------ANAC46 <---------AHL20(2)                                     ------>MYB83                  --------->ZAT18    --------->AHL20(2)         --------->ICU4            --------->TOE2(3)                  --------->ZAT14--------->AHL20(2)   <------MYB83                        <---------MYB59                  <---------ZAT14<---------AHL20(2)   <------MYB46(1)           --------->ANAC58                 --------->ALFIN1<-----------TBP <---------AHL20(2)             --------->ANAC58 <---   gagtttaagacgttgaagagtgtagtgaatgagatttatataattaagtttttatttggtcttgtgatgatgtaaatgttgtaagccaaaaacctaattt  21438900                            <---------CCA1(1)                           <---------GLK1(2)                           --------->ARR11(3)                           <---------ARR11(3)               --------->TOE2(2)                         ----------->ARR10                  --------->TOE1(2)          <---------MYB46(3)<---------RVE1(1)               --------->TOE1(3)         <--------P --------->ZAT6                          --------->TOE2(3)        <-------GAMYB    <---------TOE2(3)               <-----------GT1 --------GT1     <----------DOF2                        <-----------GT1------->TEIL   tacatttttgggttgttttctttcactaagattttttggatttttgcagtatattgttttaaccttcgaaatgtatatgtgtatatcggtagagttttgg  21439000                             <----------DOF2                           ---------->ID1                          <-----------GT1                    <---------YAB1                    <---------AHL20(2)                  <---------ICU4                 --------->ICU4              <---------AHL20(2)              --------->AHL20(2)   <-----------GT1     --------->RVE1(1)   <<<<<<<<<<GT-3b        --------->ANAC46    <---------ARR11(3) <---------YAB1<-----------GT1                                             ----    --------->GLK1(2) <---------AHL20(2)       <-------TEIL --------->ARR14(2)              ---------    --------->ARR11(3)<---------AHL20(1)<---------ALFIN1    <---------ARR14(2)         --------->AHL20(2)   gtcaaaaatctctcaaataaatattatttttcttttttttctccacatatacatcaccttcgaattcgaatacaatctctaaacaaaaaaaaaatcgtaa  21439100                                                                                                    -                                                                                                 <---                                                                                             <-------                                                           <---------ANAC58                  <-------     <---------AHL20(2)                                    <---------ANAC58             --------->ANAC55(2)     <---------YAB1              --------->AHL20(2)<---------ANAC46                     <---------ANAC46   --------->YAB1       <----------ID1             <---------ANAC58                     <---------ANAC58  <---------YAB1        --------->ANAC46           <---------ANAC58                     <---------ANAC58 ----->ICU4           <-----------GT1            ------->TEIL----------->GT1            <---------ANAC55(2) >YAB1    <-----------GT1       --------->AHL20(2)<---------At4g35610                 --------->MYB52(1)   tgtttttataattttcgatctaatttacgacaaaataaaaaatagagaatgtagcttatgggcttgaaaatttacataggcctatacattacgggcttta  21439200                                                                           --------->AHL20(1)                                                                           <---------AHL20(1)                                       ------>MYB83                        <---------AHL20(2)                                       ------>MYB46(1)                     --------->AHL20(2)                          <---------AHL20(2)                     <---------TOE2(3) ------>TEIL           --------->AHL20(2)            --------->ANAC58   --------->YAB1 ------YAB1           <---------AHL20(2)             --------->ANAC58  --------->ICU4 ---DOF2              --------->AHL20(2)           ---------->DOF2     <---------YAB1 --DAG2         ----------->GT1      <---------MYB59 --------->ANAC46--------->YAB1               ---   tgaaactcatatgtagccctgtaaataaataaacgagaaccaaattggatagacaaagccacttattgagataataataaaatggaattgtagtcttgta  21439300  Previous    Next  AGI:  At5g52860.1    Description:  ABC transporter family protein. Identical to Probable white-brown complex homolog protein 8 (WBC8) [Arabidopsis Thaliana] (GB:Q9FLX5); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT4G25750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49531.1); contains InterPro domain ABC-2 type transporter (InterPro:IPR013525); contains InterPro domain ABC transporter related; (InterPro:IPR003439); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR003593) Range:  from: 21437002    to: 21438793    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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