Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->ANAC46        =======                                                                      --------->ANAC55(2)     -------                                                                     --------->SPL7         ---------                                                                   <---------SPL7    --------->DEAR3(1)                                                                  <---------ANAC58   --------->RAP2.3(3)                                                                  <---------ANAC58   ----------->HVH21                                                                  <---------ANAC46  --------->RAP2.3(1)                                                                 <-----------------------TaNAC69(2)                                                               ------------------>SPL14    ------->TEIL                                              <-----------RAV1(2)--------------->AtSPL3 <---------MYB52(2)                                           <---------ARR14(2)<---------HSFC1(2)     --------->DEAR3(2)                                           --------->ARR14(2)--------->HSFC1(2)    --------->At4g35610                      --------->DAG2     --------->LBD16    --------->ANAC58    ---------->DOF2   <--      ----------------->AGL1             <---------ATERF1(1)--------->ANAC58    =====================  <----------DOF2    ---------->DOF2   <---------LBD16 <---------ZAT18--------->ANAC58 <------NtERF2 -MYB59   <----------DOF2  <---------ZAT6<------NtERF2 --------->ZAT18--------->ANAC58------>NtERF2   tctcctttgcctctttgagtccaaaaagagagttagtcttggccgggtccaggtttgtggacaagcttccgtacgcaatcccaagagccgacgaaccaaa  21408300                                        <---------HSFB2a(2)                                        --------->HSFB2a(2)                                        <-----------RAV1(2)                                    ------->PIF5                                    <-----------HVH21                                   <---------TGA1a                                   ================================================bZIP_DOF                                   --------->TGA1a                                   --------->bZIP60(2)       --------->ZAT14             --------->ANAC58       <---------ZAT14             --------->ANAC58      --------->ALFIN1       ---------->DOF2                                        <---------ALFIN1  <---------O2               ================bZIP_DOF                            ------>ZmHOX2a(2)  --------->TGA1a           ---------->DOF2                                     <------ZmHOX2a(2)  <---------TGA1a           =================bZIP_DOF                          <---------ARR14(2)  =====================================bZIP_DOF                                --------->ARR14(2)  --------->O2           ----------->RAV1(1)                      --------->HSFB2a(2)       ---------  =====================================bZIP_DOF                   <---------HSFB2a(2) <---------ALFIN1 ===========bZIP_DOF     ===========================RAV------>ZmHOX2a(1)       --------->ARR11(3) --->DOF2              --------->DEAR3(2)              ================================HOX2a_HOX2a >MYB46(3) --------->WRKY18(1)    <-------TEIL         =================================HOX2a_HOX2a<- ---------HVH21        <-----------------AGL1         --------->TOE2(3)        <---------ARR11(3)  -- ===========bZIP_DOF  --------->PCF2<-------PIF5      --------->TOE1(3) <----------DOF2     ---------   ggtcacgagtgtggtcaagtatggaacccacaaaggcacgtcccagacgtttctatccttcaaaacttcgagtactttcaagatcgccactcccaagccc  21408400                                                                                            <--------                                                                                            ---------                                                                                            <------NtERF2                                                                                           <---------RAP2.6(3)                                                                                           <---------ATERF1(1)                                                                                   <---------ARR14(2)                                                                                 --------->LBD16                                                                               <---------LBD16                                                                          <---------ANAC58 ------>NtERF2                                                                          --------->HSFB2a(2)                                                                          <---------ANAC58 <---------SPL7                                                                         <---------LBD16  <---------DEAR3(1)                                                                   ------>ZmHOX2a(2)--------->ALFIN1                                            <---------ALFIN1     <---------ARR14(2)--------->ARR14(2)                                       --------->HSFB2a(2)       --------->ARR14(2)<-----------HVH21                                     =====================================HOX2a_HOX2a     <---------RAP2.6(2)                                     ------>ZmHOX2a(1)       --------->LBD16 <-----------HVH21              --------->ANAC46  --------->YAB1              <---------LBD16  --------->ARR14(2)<----- >ANAC58   --------->DEAR4(1)  <---------ATHB12          <---------ARR14(2)  <---------ARR14(2)------ --------AtMYB61         ------>ZmHOX2a(1)  --------->ZAT6 <---------LBD16<---------ANAC46--------->ATERF1(2) ------->ALFIN1      --------->ARR14(2)<---------HSFB2a(2) <---------ANAC46--------->LBD16<---------ATERF1(2) >ANAC58----------->RAV1(1)  --------->ANAC46        <---------TOE2(3) <---------SPL7    --------->RAP2.6(3)   agtggtgttcccacagacaccacaatcctccccatcatcctctcgaacacttcttgaggtatcgggggatcgtcttccgggtccgggtctggccggccgg  21408500                                                    --------->GLK1(1)                                                    <---------GLK1(1)                                              <---------ANAC58            <---------HSFC1(1)               --------->ZAT2            --------->HSFB2a(2)          --------->ALFIN1                    --------->CCA1(2)            --------->HSFC1(1)     <-------TEIL    --------->ARR14(2)       --------->ARR11(3) -ZAT2   <---------ARR14(2)  <---------MYB52(1)    <---------GLK1(2)       <------ZmHOX2a(1) >ATERF1(1) >>>>>>>ZML2<-----------GT1 <---------ANAC46            <-------GAMYB -NtERF2 --------->GLK1(2)  <----------DOF2  <---------ZAT2       --------->MYB52(2) --->LBD16  <---------HSFB2a(2)--------->MYB59<---------ANAC58    <---------MYB46(3)                -   gtttttcagaggttctagaagattgaaaccctttaggtccagcgtggagcttggattcccatcttggtttgttgttaggatatagggtttttggattgtg  21408600                                            --------->MYB52(1)                                     --------->YAB1             <-------GAMYB          <---------YAB1              --------->At4g35610            <---------MYB46(3)    <---------ICU4      --------->At4g35610        ----------->HVH21      --------->YAB1         <---------At4g35610                           *TSS   <------MYB83<---------MYB46(3)<---------YAB1       --------->ZAT18                             <--   <------MYB46(1)            <---------YAB1<---------DOF5.7(2) <---------At4g35610      <---------TOE2(3) -------->CCA1(2)           <---------At4g35610  --------->ALFIN1                 <<<<<<<<<TBF1<-----   agatttggttttgacggttgttcttgagagagatgataatggtagtaaacggtgtgagcacaagagagctctcatttctatttcttcttctaatgttttt  21408700                                                                                       <---------ALFIN1                                                                                <------------CBF                                                                               --------->ATHB12                                                                              <-------TEIL                                                                         --------->GLK1(1)                                                                        --------->ARR14(2)    <-----------GT1                                               <----------DOF2    ----------->RAV1(1) --------DOF2                       <----------DOF2             <---------YAB1<---------YAB1 ------GT1             <---------AHL20(2)           <---------ARR14(2)  <---------ARR14(2)   ctttatttatcttatctacatgtattatatggttttgtctttagggataatgcatattttgtttttatctttgggatatgttcattgccacacatttcat  21408800                --------->ARR11(3)                <---------ARR11(3)               <---------CCA1(2)                <---------MYB52(1)           <----------DOF2                     <-------GAMYB        ------>ZmHOX2a(1)                --------->YAB1    <-----------GT1                    --------->AHL20(2)                                --------->ICU4   <-----------GT1 <----------DOF2--------->AtLEC2                         <---------AHL20(2)<-------   actatttatccttctttatatctttttcttcatttcatgaaaataataccgttggaacattttcttcaattttgtattttaagaacatggaattagtgtt  21408900                                                   --------->AHL20(2)                    <-----------GT1                <---------AHL20(2)                       ---------                 --------->ATHB51                  --------->AHL20(1)       <---------ARR11(3)                 <---------ICU4                    <---------AHL20(1)       --------->ARR11(3)                <---------YAB1                --------->AHL20(2)  <------ZmHOX2a(1)    <----------DOF2                --------->ICU4          --------->ANAC46          ===================HOX2a_HOX2a              <---------ICU4          --------->ANAC46   <---------------AGL15        <---------ANAC58              --------->YAB1          --------->ANAC58   --------------->AGL15        <---------ANAC58             --------->ICU4           --------->ANAC58  <-----------------AGL3  <---------YAB1    <--      ----------->GT1                 --------->ZAT6    ----------------->AGL3======================= --ZAT6      <---------ATHB12        --------->ZAT18    ----------------->AGL2------>ZmHOX2a(2)   ---   cagaaaattagaaaaatcattatttcttcacttcaaatgcacactacatataatataatccaattttaggaaccatttgatcttgatagcttttcatacg  21409000                                                                               --------->ANAC58                                                                               --------->ANAC58                                                                             ---------->DOF2                         ------->GAMYB                                --------->ARR14(2)             <---------AtLEC2                                         --------->ARR11(3)         ----------->RAV1(2)--------->ANAC58                          <---------ARR11(3)            <       <---------ALFIN1 --------->ANAC58                              --------->ARR11(1)          ---   ------>ZmHOX2a(1)    --------->ANAC58           <-----------GT1    <---------ARR14(2)          ---  --------->TOE2(3)     --------->ANAC46   <---------LBD16            <---------GLK1(2)           <-- >TOE1(2)--------->At4g35610--------->ANAC58 --------->LBD16        ----------->ARR10             --- -------GLK1(1)--------->ANAC58            --------->ZAT18        ---------->DOF2               ----- =========HOX2a_HOX2a--------->MYB46(3)   --------->ALFIN1      --------->ANAC58       <---------ANAC58 ------>GLK1(1)--------->ANAC58       ---------->DOF2           --------->ANAC58       <---------ANAC58   atttcctcaacacctgcaaggcaacaacgcaaacaataaacaaagtgcggaattaacttccagcgcaagaaagatactgcaaagcaatttcttgaggctc  21409100             <---------HSFB2a(2)             --------->HSFB2a(2)       ----------------->AGL1      --------->SPL7      ------->TEIL    <---------SPL7   --------->ANAC58                                                                                <-   --------->ANAC55(2)                                                                             <-   <---------ANAC55(2)      <---------ICU4                                                         <-   <---------ANAC58         --------->YAB1                                                        <--   <---------ANAC58        --------->ICU4                                                      ------   --------->ANAC58   <---------ANAC55(2)          --------->LBD16                           <-------  --------------->AtSPL3   <---------YAB1        <---------LBD16                             <-------  <-------TEIL        --------->ANAC58      <---------At5g28300                            <---------ZAT14  --------------->AtSPL8 --------->YAB1 <---------ICU4                                    --------->ALFIN1  --------->SPL7      --------->ANAC55(1)  <-----------GT1                              <---------ANAC46 ---------SPL7        --------->ANAC55(2) <---------YAB1                        <---------ANAC46 <--- ------>ANAC58        --------->ANAC58  --------->ATHB51                     --------->ALFIN1<------- ------>ANAC58   <----------ID1         <--------HAHB4                       <---------AtMYB61 <----- -------------AtSPL3  ----------->GT1  <---------YAB1                      <---------At4g35610 <----- ------>ANAC46   <----------ARF1       --------->ICU4                    --------->ZAT18<---------ANAC58 ---->MYB52(1)  <------ZmHOX2a(1) ------->GAMYB<---------SPL7      <------ZmHOX2a(1)    <---------ANAC58   acggtacgtaccctactaggagacaagtaataataacgctcattattactgtccggagagagtatggaaggagattgcgctggtggagaagcgtggagtg  21409200  Previous    Next  AGI:  At5g52780.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49500.1) Range:  from: 21408099    to: 21408700    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g52790.1    Description:  CBS domain-containing protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G47330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49501.1); contains InterPro domain Cystathionine beta-synthase, core (InterPro:IPR000644); contains InterPro domain Protein of unknown function DUF21 (InterPro:IPR002550) Range:  from: 21408943    to: 21411585    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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