Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------ANAC46                     ===============================================MADS_MADS          <------MYB46(1)                        --------------->AGL15          <------MYB83                       --------->KAN4(2)       <---------ANAC58                     --------->YAB1                                        <--       <---------ANAC58                    <------ZmHOX2a(2)                                      <--       <---------ANAC46                   <-----------ARR10 --------->At4g35610                   <--   <---------At4g35610               --------->MYB52(1)  <---------At4g35610                      <-- --------->ZAT14                    --------->WOX13(1)   --------->At4g35610                      <-- <---------ZAT14                <-----------GT1  --------->TOE2(3)                 <----------DOF2--- --------->ZAT18     --------------------->WRI1  <---------------AGL15          --------------->AGL15   atgtgaactgcttggtgtgattaccttgtattttttgccaatcggatcataccctaataagctgctcaaattgttcatactactcctttgagttaatctt  21366500           --------->ZAT2           <---------ZAT2         --------->LBD16        <---------ANAC55(2)        <---------ANAC58        <---------ANAC46     --------->DEAR3(1)        --------->ANAC55(2)  <---------ATERF1(2)        <---------ANAC58     --------->ATERF1(2)       <-----------------------TaNAC69(2) --------->ARR14(2)          --------->ANAC46 <---------ARR14(2)         <---------LBD16 -------ANAC55(1)       <-----------HVH21 -------ANAC58  ----------->GT1        ----------->RAV1(2)                                          - -------ANAC55(2)    --------->ANAC55(2)                                                --------->RVE1(1) -------ANAC58  <---------ZAT6--------->LBD16                                          --------->GLK1(2) -------ANAC46 <---------TOE1(3)<---------ALFIN1                                       --------->ARR11(3) ------>ANAC55(2)    <---------ANAC55(2)  <---------SPL7                               <---------ARR11(3)   gcgtattgtcccgtgctagggttacatatcaccggcacttcgcctgtacgcgtattagggaaatagagcaaaccagagacaaggccaaaaatctcttgtc  21366600                                                                                        --------->MYB46(3)                                                                                       --------->ANAC58                                                                                       --------->ANAC46                                                                                       --------->ANAC58         <---------MYB59                                                       <---------ANAC46        --------->ANAC58                                  --------->HSFB2a(2) <------NtERF2        --------->ANAC55(2)                               <---------HSFB2a(2)------>NtERF2        --------->ANAC55(1)  --------->At4g35610        <---------At4g35610 --------->DEAR3(1)        --------->ANAC58 --------->GLK1(2)              --------->At4g35610 ----------->HVH21        <---------ANAC55(2)  <---------At4g35610 <---------GLK1(2)          <---------DEAR3(1)        --------->ANAC46 --------->ARR14(2)    --------->ICU4               <----------ID1  <-------- -------->O2             <---------ARR14(2)    <---------YAB1              --------->ATERF1(1)     --   ccatgtctctacgtaactccatatgaaaatcggctgatactacaagagaatgattctcatctggaaactgagactgaggcgacgagtacaagcaccactt  21366700                           --------->ALFIN1                         <---------ANAC46                         <---------ANAC58                                                        ----                         <---------ANAC58                                                 --------->CCA1(2)                         --------->O2                                                     <------ZmHOX2a(2)                         <---------O2                    --------->MYB46(3)              --------->AGP1                         <---------bZIP60(2)          <------ZmHOX2a(1)   <---------WRKY18(1) -------                         <---------TGA1a            --------->MYB59    <---------ICU4    <---------ARR11(3)  <---------GLK1(2)      --------->TGA1a          --------->ICU4     --------->ARR11(3)  --------->ARR11(3) -ALFIN1                <-----------------------TaNAC69(2)           <---------ARR11(3)  <---------ARR14(2) ------->YAB1--------->LBD16                 ----------->GT1     <---------ATHB12        --------->ARR14(2)   atcagaattttgaaccgcgaataagagacgtggacgactcaagggcctagtaattaggaacaactcaatgaaatcttgacctcttagtatagatccacag  21366800                                                                                  ------>ZmHOX2a(2)                                                                                 <---------At4g35610               ------>MYB83                                                     --------->ARR14(2)             <---------MYB59                                           --------->YAB1       <---------ANAC58                                             --------->WOX13(1)       <---------ANAC58                                 --------->HSFB2a(2)     <---------ARR14(2) ----->ARR11(3)------>MYB46(1)                     <---------ARR14(2)  <---------LBD16  <-----------GT1 -->ANAC46   --------->AtMYB61          --------->GLK1(2)     --------->YAB1    <---------AGP1   <---   aacttggatgcgagaccaaacttagcgattgaattagtagacaatctcgagagtatatcgagaatgatatcaatcgggattggatctgattttccttctc  21366900                                                                            <---------TOE1(3)                                                                    <---------HSFB2a(2)                      ------>ZmHOX2a(2)                             --------->HSFB2a(2)                    --------->ARR11(3)                     <---------ARR14(2)              <---------STY1(1)       <---------TOE1(2)                                   --------->ARR14(2)              --------->STY1(1)       <---------TOE2(2)                             --------->ARR14(2)     <---------TOE2(3)       --------->SPL7<------ZmHOX2a(2)               <---------ARR14(2)    --------->MYB52(1)    <---     <---------SPL7 <---------ARR11(3)         <---------ARR14(2)<---------ARR14(2)       --------->TOE2(2) -------DOF2    ---------->DOF2                --------->ARR14(2)--------->ARR14(2)--------->ANAC46--   tttccatcgtacgtttttcaaagatcgtgtattttggattttggttccagttccagttccagttccagttccagacttaacgtagacgacaacctagggt  21367000                                                                                           <---------                        <----------ID1                                                    <----------                    --------->MYB52(1)                                 --------->ANAC46   -----------   ------------>CBF ------>MYB83                                       --------->ANAC58  ------------  --------->ANAC58  ------>MYB46(1)                          ---------->DOF2             ============  --------->ANAC58<---------MYB59                         <---------MYB52(2)             ------------ ----TEIL    --------->YAB1 <------NtERF2            --------->ANAC46  --------->ANAC58<-----------GT1 -------->DOF2   --------->ANAC55(2)           <-----------HVH21    <---------SPL7    <-----------GT1   tcaaaggcaattcattcatacctaatgggccgaatgaattcatgggccatgttagaggcaactaaaaggctggacgaaactatctattttagccttttag  21367100      <---------ANAC55(2)      ----------->GT1      <---------ANAC55(1)      --------->ANAC55(2)     <-----------------------TaNAC69(2)    --------->MYB52(1)                                                                     ----------    <---------DOF5.7(2)                                                                 <--------ATHB1 <------MYB83                          <-------TEIL                                     --------->YAB1 <------MYB46(1)                    <------ZmHOX2a(1)               ----------->GT1     <---------ICU4 -DOF2<---------ANAC46       <-----------TBP                --------->TOE1(3)          --------->ICU4 -----AGL15                 <----------DOF2               <---------TOE2(3) ------------>CBF--------- ---->AGL15                <-----------------AGL3    <-----------GT1--------->ALFIN1   <---------ATHB51 ----->AGL1              --------->ARR11(3)    <------MYB46(1) ---------->DOF2         <---------ATHB12 ============================================MADS_MADS <---------MYB52(2)  <<<<<<<<<<<<<<<<<LFY ----->AG                <---------ARR11(3)    <------MYB83 --------->TOE2(3)      ------------>CBF--   gggaggtaacgtattaatgtccccaactatcttttataggatgcatagttggttttaactaacattaaaggtgttactaacaatgggcaatgatggtaaa  21367200                                                                                     --------->ZAT14                                                                             <----------TaMYB80                                                                            ---------->TaMYB80                                                                            <---------ARR14(2)                                                                            --------->ARR14(2)                                                                            ------->TEIL                                                                         --------->ANAC55(2)                                                                         --------->ANAC58                                                                         --------->ANAC58          <---------ZAT14                                   ----------------------->TaNAC69(2)          --------->ZAT14                                 <---------ZAT6 <---------ANAC55(2) ->GT1    <---------ZAT18                    --------->ARR11(3)          <---------ANAC46 >At5g28300                                  --------->GLK1(2)          <-----------------------TaNAC69(2) ------->YAB1                               <---------GLK1(2)        <-----------HVH21   attataacgcagtggacacaatataacttagccataccaatgcaaagaatcttgaaactagtattaaactcagtcacgtatatgctctccagtctatgct  21367300                                                                                      <---------YAB1                               --------->ARR11(3)                                   <---------ICU4                   <---------------AGL15           --------->AHL20(2)              <---------YAB1      <----------DOF2          <---------ARR11(3)  <---------AHL20(2)              --------->ICU4   --------->ARR11(3)         --------->At4g35610 <---------AHL20(2)             --------->YAB1   <---------ARR11(3) --------->SPL7              --------->AHL20(2)        ---------->DOF2   tcgaagagctttcttctaatcccatacgaagaagctctctatgtttttctaatttaatcaggcttagacaactagtttcaaagtcataattcttggtgtc  21367400  Previous    Next  AGI:  At5g52620.1    Description:  F-box family protein. Identical to Putative F-box protein At5g52620 [Arabidopsis Thaliana] (GB:Q9LTF5); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT3G57590.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83390.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 21365780    to: 21366907    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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