Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <--------HAHB4                                            --------->YAB1                                            <---------ICU4                 <---------AHL20(2)                                           <---------YAB1                 <---------AHL20(2)                                           <---------ATHB12               --------->AHL20(2)                                           --------->ICU4             <---------YAB1                                      <---------ANAC46               <----------DOF2                                      --------->ANAC55(2)           ------>ZmHOX2a(2)                                      <---------ANAC55(2)          <------ZmHOX2a(2)                                      <---------ANAC58            --------->ARR11(3)     --------->ZAT6              --------->ATHB51                 <---------AGP1    <---------YAB1               <---------ICU4                   <---------ARR11(3)  <---------ICU4                 --------->ATHB12                 --------->AGP1                  <-- --------->ICU4   <---------WOX13(1)  <---------ANAC58           <---------CCA1(2)            <------ -->YAB1   <---------DAG2       --------->ICU4                  --------->MYB59             <-------- >AHL20(2) <----------DOF2      <---------YAB1                  ----------->ARR10        <---------AHL20(2)   agcattatgactactttctgactgataaaacttcataattgcgtaatcattttcaaacaatgtagttagatctttattaattttcgaacaatttatcttt  21362400                    <---------AHL20(2)     <---------ANAC55(2)                    --------->LBD16     --------->ANAC55(2) <-----------GT1   --------->ANAC46 -------ZAT6       --------->AHL20(2)     <---------LBD16 ----DOF2          <---------AHL20(2)   <-----------GT1                         --------->DAG2    --- -YAB1   ----------->HVH21 --------->ANAC55(2)           ----------->HVH21     ---------->DOF2  -----   gtgttatacgtatgacccttattaattttacatgatgcatattaaccggaacaattgcaatgacatatatgtttatgttcaaaaagtttgcaaaaacctc  21362500                                                                --------->HSFB2a(2)                                                                <---------HSFB2a(2)      <---------HSFB2a(1)                                                               <---------LBD16           --------->HSFB2a(1)                                                              <---------ANAC46   <---------ALFIN1                                               --------->At4g35610               --------->ZAT6 <----     <---------ALFIN1                    ------>ZmHOX2a(1)   ------>NtERF2  ------>MYB46(1)   <------ --->ZmHOX2a(1)                --------->GLK1(1)     <---------YAB1         ------>MYB83<---------TOE1(2) ------>RAV1(2)                <---------GLK1(1)   --------->YAB1     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   ctgtttcgcacccttcaatacaaaatttccagcatttcccatccttctcagcatcatcatcgatgcctggaagacaccttccaacactcggatgttcttt  21362600                                                                        --------->AHL20(2)                                                                        <---------AHL20(2)                                                                       --------->AHL20(2)                                                                    --------->REM1(1)             <--                                   <---------ANAC46               ------>ZmHOX2a(1) --------->AHL20(1)                          --------->LBD16                       ------>ZmHOX2a(2)  --------->AHL20(2)                         <---------LBD16                       <------ZmHOX2a(2)   --------->YAB1<---                      --------->ARR11(3)                      ------->TEIL       --------->AHL20(2)                     --------->GLK1(1)                        <---------ARR14(2) --------->AHL20(1) -------GT1         xxxxxxxxxxxxxxxx>smallRNA(s)              --------->ARR14(2)--------->YAB1   ---- ----DOF2    ---------->ID1    --------->ZAT18           <---------AtLEC2   --------->YAB1<---------ANAC55(2)   acaacatatcgatttgtcttcaaatatccagggtgcgatgtgtttttgtccatctatttgaatggatcctacatttaatcaaaaataatattacatgaat  21362700                                      <----------DOF2                                  <---------TOE2(3)         --------->TOE2(3)     --------->DOF5.7(2)      ----------->RAV1(1)   <---------TOE2(3) -------AHL20(2)            --------->DAG2                            --------->YAB1 ------AHL20(2)           ---------->DOF2  <---------ZAT6             --------->ANAC46           ---- ----->AHL20(2)   <---------LBD16<---------DOF5.7(2)                  --------->ANAC55(2)  --------->AHL20(2)   taattttccaacataaaaacttcggaaaaaaaggttaacgctttagtgctaaatacaaaaaaaacatagtatacataatacaatagcagcaaataaaaca  21362800                                                   --------->AHL20(2)                                                   <---------ARR11(3)                                                   <---------AHL20(1)                   --------->MYB46(3)<----------DOF2     <---------TOE2(3)     ----------->RAV1(1)      <----------DOF2  --------->YAB1 <---------AHL20(2)                   <- ------>DOF2     <-----------GT1  <-----------GT1  --------->AHL20(1)                 --------->YAB1   aaagagacaacatttgttctaaccattcttctcttttttctttgttaaatcaaaatattaagaattttttgatatttttgtatttgaatgagaatgaaga  21362900                                                           --------->TOE2(3)                                                         <---------YAB1                                                         <---------TOE2(3)                                                        <-----------GT1                    --------->YAB1              ------>ZmHOX2a(1)                                   <                 <---------ICU4                --------->TOE1(2)                               <-----                 --------->YAB1               <---------HSFC1(2)                              -------                <---------AHL20(2)            <---------HSFB2a(1)                             -------              --------->YAB1                  ------>ZmHOX2a(2)                      <------ZmHOX2a(1)            <-----------TBP                   --------->HSFC1(2)                   --------->ANAC58 <        <---------ANAC58                      --------->HSFB2a(1)         --------->AHL20(1)  <------        <---------ANAC58                     <------ZmHOX2a(2)            --------->AHL20(2)  <------        <---------ANAC55(2)                 --------->ARR11(3)            <---------AHL20(1)  -------        <---------ANAC46                    <---------ARR14(2)            <---------AHL20(2)  <------        --------->ANAC55(2)  <-----------GT1--------->ARR14(2)      --------->ANAC55(2)  ------------ -----ZmHOX2a(1)<---------YAB1              <---------ARR11(3)<---------ARR11(3)   --------->ANAC58--   aggagttgtttcgtatttataattagaattctaactatattcaagggatccttcgaattaacattatctcacataataaatttgtaaggaatacaatata  21363000         ------>MYB46(1)         ------>MYB83       ------->GAMYB    --------->WOX13(1)   <---------WRKY45   <---------WRKY12   <---------WRKY38(1)  --------->WRKY18(1) ------MYB46(1) ----AHL20(2) -->ARR11(3)                            --------->KAN4(2) -->AHL20(1)                           <----------TaMYB80         --------->ANAC46 ------MYB83                           <---------GLK1(1)      <-----------GT1 ---ARR11(3)                           <---------KAN4(1)     <---------YAB1 ---AHL20(1)                          --------->ARR14(2)   <---------ICU4 -->AHL20(2)<---------AHL20(2)        <---------ARR14(2)  --------->ICU4<-------TEIL ---AHL20(2)--------->AHL20(2)   <------------CBF        --------->TOE2(3) >CBF  <---------MYB59          --------->ATHB12  --------->WRKY45--------->ANAC58         <---------TOE2(3) ------->MYB59               ---------->DOF2    <----------DOF2   --------->ANAC58      --------->CCA1(2)   tttggtcaaccaaattaaaaacatgtttccaaaaagattggatattccaactttgactacattattacaagacatacatgacttatttagataaacgttt  21363100                                                             <---------YAB1                                                           --------->ATHB12                           --------->AHL20(1)             <---------YAB1                           <---------ICU4                 --------->ICU4                         <---                           <---------AHL20(1)           --------->CCA1(2)                        ----                           --------->ARR11(3)          <---------ARR11(3)                       <----        <---------AtLEC2   <---------ARR11(3)  <-----------HVH21                                <---- <--------P   ---------->DOF2    <-----------RAV1(1)   --------->ARR11(3)                     <------   ttggtagtttgcaaggtaatgcagactaatattttctgtgggtttattctgtcaagagatatgattagagactcattcatttctcaatattccaattcac  21363200               <---------AHL20(2)              --------->AHL20(2)              --------->AHL20(1)              <---------AHL20(1)              <---------AHL20(2)             --------->YAB1            <---------YAB1           --------->AHL20(2)          --------->AHL20(2)          <---------AHL20(2)           <---------ANAC58     <------ZmHOX2a(1)                 <---------ANAC55(1)   <---------TOE2(3)                   <---------ANAC58 ------------AGL15            --------->ANAC58               ------->TEIL ----------->AGL15            --------->ANAC58       --------->ANAC58                               < -------------AG --------->ARR11(3)    <---------ANAC46     <---------CCA1(2) --------->TOE2(3)     - -------------AGL1            --------->ANAC46       --------->ANAC58       <-------TEIL --------->ARR11(3) -----GT1--------->AHL20(2) <---------ALFIN1   <---------AHL20(2) <----------DOF2      <-------TEIL<-   tagtttaggaaattaatataatcttgaggctcacgcctattacttgtatataaacaagctctgtatctctttgtgaaatacatcaaacatacatcttcta  21363300  Previous    Next  AGI:  At5g52605.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G14276.1) Range:  from: 21362442    to: 21362826    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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