Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------HSFB2a(2)                                                                              <------ZmHOX2a(2)                                                                            ------->GAMYB ---------->DOF2                                                                     --------->DAG2    --------------                                                      --------->ARR14(2)   --------->MYB46(3)      --                                           --------->TOE2(3)        ---------->DOF2    --------->HSFB2a(2)                                          ----------->GT1        --------->At4g35610   <-------------                                        --------->MYB52(1)    <------ZmHOX2a(2)     <---------ARR11(3)           --------->ANAC46          --------->ANAC46<---------CCA1(2)   --------->MYB52(1)        <-   caattggtatcacacaaaatcaacttcacttaagaatcaacacaacgtaaaattcaaatctccgatcagataaagtaacgatcgaagttctataaagagt  21340600                                                                                         ------->GAMYB                                                                                        <---------MYB52(2)                                                                                      --------->MYB52(1)                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                                <---------ZAT18                                                                               <---------ANAC58    <---------SPL7                                                             <---------ANAC58   ------>ZmHOX2a(2)                  --------->ZAT14                          <---------ANAC46     - ->AGL15              ----------->RAV1(1)       --------->ARR14(2)    --------->CCA1(2) --------->MYB46(3) ------->ICU4       <---------ZAT14   <---------ZAT14         <---------MYB52(1)<---------SPL7  ----- --AGL15            <---------ZAT18   --------->At4g35610   --------->ATHB12  <---------------------- --------YAB1       --------->ZAT18   <---------At4g35610--------->YAB1       --------------->AtSPL3-   gatgatcgtaccagagaccgagagcaccagtagcgaagagagcagtccaagttccccattcatcgttgggagaaatgagaggcgtactcaacgaactcac  21340700                               ----------->RAV1(1)     --------->ANAC58                               ------>NtERF2           --------->ANAC55(2)                      <---------ICU4                   <---------ANAC55(2)                <---------At4g35610                    --------->ANAC58           <------ZmHOX2a(2)  <---------ETT(2)      <---------MYB52(1)          --------->ARR14(2)  --------->DEAR3(1)   <-------GAMYB       ------>ZmHOX2a(2)      ----------->HVH21   <---------ANAC58      <------ZmHOX2a(2)       --------->ETT(2)    <---------ANAC55(2)     <---------ARR14(2)     ------>NtERF2         <---------ANAC58     --------->ARR14(2)    <---------LBD16     <---------ARR14(2)     --------->MYB52(1)   <---------LBD16      --------->ARR14(2)  --------->MYB46(3) <---------YAB1          <---------MYB46(3) -------->MYB52(1)   --------->ICU4       <-----------HVH21                        <-----------ARR10 ---->ZAT6<---------ARR14(2)--------->LBD16 <---------DREB2C(2)<----------ID1<------ZmHOX2a(1) -TaNAC69(2)------>ZmHOX2a(2)--------->RAP2.3(1)  --------->ANAC55(2)     <-----------RAV1(2) -------->ARR14(2)--------->ICU4<------NtERF2<---------DEAR3(2)<---------ETT(1)    --------->GLK1(2)   agtaaccgatcggatcggagatgatgattccggcgacagaaacctgtcggttccgttacgaaattgcgacaacgaagcaggagagaagctaagccttgaa  21340800                                 <---------ANAC58                           <------ZmHOX2a(2)                          <-----------ARR10                          --------->ARR14(3)                          --------->ARR14(2)                          <---------ARR14(3)                          <---------AGP1                          <---------ARR11(3)                          --------->ARR11(3)             --------->ANAC58                          <---------ARR14(2)             --------->ANAC58                         <---------CCA1(2)              <------NtERF2                        <-------TEIL                   ------>NtERF2             <---------DOF5.7(2)                        ----------->ARR10             --------->DEAR3(1)       --------->At5g28300                       <--------P<---------ANAC46    --------->RAP2.3(1)       --------->DOF5.7(2)         <---------At4g35610     <---------ANAC58  --------->ANAC58        ------>NtERF2<---------ARR14(2)         --------->At4g35610------>ZmHOX2a(2)      --------->ANAC58       --------->DEAR3(1)  <-------TEIL      <---------TOE2(3)             ------->TEIL          ------>NtERF2   --------->ARR14(2) <--------P        <-----------RAV1(2)            --------->SPL7       --------->DEAR3(1)     <------ZmHOX2a(2)   gaggttgatttagctgagaattcaggtagatcttggcgtgaaacaatgtacgaacgccgacgaaatagtctcgacgacgacggtaacgagtttccgatca  21340900                               <---------ANAC46                               <---------ANAC58                               ========================================bZIP_DOF                               <---------ANAC58                               ==================bZIP_DOF                               --------->TGA1a                --------->DAG2                          <-----------RAV1(1)       --------->DAG2                     <------NtERF2    <----------DOF2--------->DAG2   --------->ATHB12                    ------>NtERF2   --------->At4g35610      --------->DAG2                  ---------->ID1    <---------At4g35610 --------->ALFIN1<---------YAB1             <---------ZAT2<-----------HVH21       ---------->DOF2   --------->ICU4            --------->ANAC58   --------->O2      <------ZmHOX2a(1) ----------->GT1            --------->ANAC58---------->ID1--------->ANAC46  ---------->DOF2                <---------ZAT18   cattgagtaatggcaagctcgtcgccatttgtcgcgtctgcttcacgacgaggaaaaggtggaaaagggaagtgattagtggaattgactcagtgtgcct  21341000                 <----------DOF2                <---------ANAC58                <---------ANAC58           <---------DAG2                                               <------------CBF       <---------WRKY12                   --------->ZAT6            --------->YAB1      *TSS <----------DOF2         <-----------TBP              <---------AHL20(2)                 --    <---------ANAC58            <---------AHL20(2)             --------->AHL20(2)                  --    <---------ANAC58           --------->AHL20(2)   --------->MYB52(1)<---------YAB1      -----------   attagtgcgtcaacttttgctttccattacaaattttatatataacactgagccaaaccgaaatattaaatcaaaattggtttcgattaaaccggtaaac  21341100                                                                                                <----                                                                                                <----                                                                                             --------          >>>>>>>>>>MYB80                                    <---------ANAC58           <-----------GT1 ---->MYB46(1)    ----------->GT1        <-----------HVH21   <---------ANAC46      <---------AHL20(2) ---->MYB83 --------->AtMYB61    <-----------HVH21           <---------ANAC58   --------->TOE2(3) >GT1 <---------ATHB12     <-----------HVH21          ---------->DOF2       <---------MYB52(1)  <----   caaatcaaatcaaaccaaaactgaaaaatggtcagagtcacagagtcacatagacccaaagttgtgtgtttgaaaaccgttttcttaaattttctgtttc  21341200                                                                                      <---------At4g35610                                                             <---------ANAC58         --------->ZAT2      --------->ANAC55(2)                                    <---------ANAC58         --------->At4g35610      <---------ANAC55(2)                               <----------DOF2            --------->ZAT2   <------ZmHOX2a(2)                                <---------MYB52(1)             <---------At4g35610 -----ANAC58                                       <-------GAMYB                   <---------ZAT2   - -----ANAC58                                      <---------MYB46(3)               --------->At4g35610 --------------->TaNAC69(2)  <----------DOF2   ------------>AtMYB77 <---------At4g35610             < -----ANAC46            ---------->DOF2   <---------YAB1<---------DAG2          ------>ZmHOX2a(1)   -   ttgggatcacgtttctcatcttcttccaaagctttgagtttgttcttaatggcagttactttttcgtctcggctcatttgtcctgagctgctcccgttta  21341300                                                                <---------ANAC58                                                                <---------ANAC58                                                               <---------HSFC1(2)                                                     --------->HSFB2a(1)                                                     <---------HSFC1(2)                                                     --------->HSFC1(2)                                                     <---------HSFB2a(1)                                            <---------YAB1     --------->HSFC1(2)                              <----------DOF2       --------->GLK1(2)                    ---------->DOF2                             ============================HOX2a_HOX2a               ------->TEIL                             ------>ZmHOX2a(2)      <---------KAN4(2)     <---------STY1(2)                           --------->ARR11(3)       --------->ARR14(2)    --------->STY1(2)                           <---------ARR11(3)     <------ZmHOX2a(1)  --------->ZAT6----------->RAV1(1)                          --------->YAB1  --------->YAB1  --------->HSFB2a(2)     --------->ANAC46 -- -------->GLK1(2)        --------->ICU4   <---------ICU4  <---------HSFB2a(2)   --------->ANAC46 ---- ---------ARR14(2) --------->HSFB2a(2)   --------->ICU4   --------->HSFC1(1)    --------->ANAC58 ---- -------->ARR14(2) <---------HSFB2a(2)  --------->ARR11(3)<---------HSFC1(1)    --------->ANAC58 ----   caaatctggttctgtttccttctggtaatgatcttttggagtgatcatgagaggaatcttctagatgcttctcactagctagacgcaccactaaaggcct  21341400                                                   <---------At4g35610   --------->ANAC58                                --------->At4g35610   --------->ANAC58                     <---------ZAT2                                  --------->YAB1 ------->AtMYB61                        <---------At4g35610                <------ZmHOX2a(1) -->MYB46(1)               <----------DOF2    ------>ZmHOX2a(1)      <---------GLK1(1) <---------ATHB12 ---->P            ------->TEIL         --------->At4g35610    <---------REM1(1)     --------->WOX13(1) -->MYB83       --------->AtLEC2        --------->ZAT2   <----------DOF2<-----------RAV1(2)   -------   accacaagctaatctcccatgcatcttctctttcgccaattcagcttcctgtatgctcactttagatgtagaaatcaggagattgctcaatcaaaatcaa  21341500  Previous    Next  AGI:  At5g52540.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G24000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49471.1); contains InterPro domain Protein of unknown function DUF819 (InterPro:IPR008537) Range:  from: 21338654    to: 21341006    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g52545.1    Description:  nucleotide binding. similar to hypothetical protein [Vitis vinifera] (GB:CAN68282.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49472.1); contains domain RNA-binding domain, RBD (SSF54928) Range:  from: 21341185    to: 21341671    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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