Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------ARR11(3)                                                 --------->AHL20(2)      --------->AHL20(2)                                           --------->ANAC58      <---------AHL20(2)                                           --------->ANAC58      <---------AHL20(1)                 <---------ATHB51     --------->YAB1      --------->ARR11(3)                 --------->AHL20(2) --------->ANAC58     --------->AHL20(2)                  <---------AHL20(2) --------->ANAC58 -TEIL--------->AHL20(1)               --------->YAB1    <------ZmHOX2a(2)        --------->AHL20(2)   tcttcaaatatattatacagacaatatagagattatttgaaaaataattcttcttagggatcaagcatgaagcaatataaaaaaaaaaatggctcttgtt  21327900            --------->YAB1           <---------ATHB12             <---------MYB52(1)                              -------------          --------->ANAC58              <--------P                                  <---------GLK1(2)          ------>MYB83--------->HSFB2a(2)     --------->AHL20(2)       <---------AHL20(2)          --------->ANAC58            ----------->GT1    --------->ANAC46           --------->ARR14(2)          ------>MYB46(1)        <---------YAB1<---------YAB1          --------->AHL20(2)           - ----------->GT1      <---------HSFB2a(2) --------->MYB52(2)   <---------ARR11(3)   <---------ARR14(2)   gaaaggtaaaccaagcatgagtttctcgagagtttataaatggttagttttaatagtttacacaataacttatttatatcaatgtggattcttgtattag  21328000                                                                                                 ----                                                                                               <-----                                                                                               <-----                       ----------->GT1                                                        -------                  --------->DAG2   <---------ATHB12                   ------->GAMYB           <------            <---------ANAC58     --------->WOX13(1)          --------->YAB1         <---------ANAC58            <---------ANAC46    <---------AHL20(2)          <---------YAB1          <---------ANAC46       <-----------RAV1(1) --------->AHL20(2)             --------->YAB1            <---------ANAC58 -->AGL15   <---------ANAC58   --------->AHL20(2)        <---------YAB1--------->MYB52(1)     ------- ---------->GT1  ---------->DOF2--------->AHL20(2)     <---------ZAT6<---------MYB52(2)     <--------   aagagtaaattgttgcttaaaaagctagaaaaaataaatcaattttgtattttgttagtattatgataacaactaacaatgtaatggcttgagtattaat  21328100 <---------TOE2(3) ----->YAB1                                                                            --------->TOE2(3) ----TOE2(3)                                                                       <---------AHL20(2) ----YAB1                        ----------->GT1                               <---------AHL20(2) -->AHL20(2)                --------->ANAC58              --------->ATHB12     --------->AHL20(2) ---AHL20(2)                --------->ANAC58            <----------DOF2       <---------ATHB12  <---- -->YAB1               ------->GAMYB ---------->DOF2    <---------DAG2        --------->AHL20(2)<---- -YAB1              --------->MYB52(1)          <---------GLK1(2) <----------DOF2  --------->AHL20(2)   attaagttttatgtgtccagtccaacgggcaagaaatgtaaaagaacccagactctcactttattgggcttataggtccaattaataaaacttaatgggc  21328200                                                                                          --------->At4g35610                                                                                         ----------->RAV1(1)                                                      <---------ICU4                     ------------       --------->MYB52(1)                          --------->YAB1                        *TSS     <--    --------->ANAC58                               <---------ICU4                      --------->At4g35610    --------->ANAC58                              <---------YAB1                       <---------At4g35610    --------->ANAC46                              --------->ICU4                    ---------->DOF2 -----ANAC58         <------ZmHOX2a(1)          --------->YAB1               ----------->HVH21  ----- -----ANAC58     <---------TOE1(1)        <-----------GT1     --------->ANAC46    <----------DOF2 ---   ttatccacacaacgagtttacgaggagactgtgagagtttgttttcacagtcatcatcatctctaagaaacaaacttgtatgacctttaagcagcaaaaa  21328300                                                                                          --------->AtMYB61                                                                                          <---------ALFIN1                                                                                         --------->MYB46(3)                                                                                        ------>NtERF2                                                                                       --------->DEAR3(1)                                                                                       <---------ALFIN1                                                                                     <---------ATERF1(1)         --------->ANAC46                                                            ------>NtERF2       --------->TOE2(3)                 --------->bZIP60(1)                         --------->LBD16      <----------ID1        ----------->GT1                                         --------->ANAC46 ------------>ANAC81       --------->ALFIN1<------NtERF2                            --------->ANAC58 --------ID1            --------->DAG2   <---------bZIP60(1)        <---------O2    --------->ANAC58 ----->DOF2           ---------->DOF2    <---------ANAC46           --------->O2   <---------LBD16 -------->GT1       ----------->HVH21   <------NtERF2        --------->ZAT14      >>>>>>>>>>E2Fb<----   aagaaaaaaccacaaaacttctctgaaaggtggataaatggtgtcgtcgtctctgagactcccttcactcacttcgcttctatttcccgccaccactcgt  21328400                                                                 ------>NtERF2                                                                --------->DEAR3(1)                                                               <----------CDC5                                                               --------->ATERF1(1)                                                              ------>NtERF2                                                              <---------RAP2.3(1)                                                              <---------ATERF1(1)                                                             --------->DEAR3(1)                                                            --------->ATERF1(1)                                                            <---------ABI4(2)                                                            <------NtERF2                                                            --------->RAP2.3(1)                                                           <---------ORA47(2)                                                           <---------ERF1                                                           <---------RAP2.3(1)                                                           <---------DEAR4(2)                                                           <---------RRTF1(1)                                                           ------>NtERF2                                                           <---------RAP2.6(1)                                                           <---------ATERF1(1)                                                          --------->O2                                                          <---------O2                                                          <---------DEAR3(1)                                                          --------->DEAR3(1)             ------>NtERF2                                <---------RAP2.3(2)             --------->LBD16                             --------->ATERF1(1)            <---------DEAR3(1)                    <---------GLK1(2)           <---------LBD16         --------->MYB46(3)  ----------->HVH21       <---------ALFIN1            --------->DEAR3(2) <---------HSFB2a(2)     <---------ALFIN1         --------->ANAC46    --------->ARR14(2)                                <    --------->MYB46(3)        --------->ANAC58  --------->LBD16<------NtERF2       --------->LBD16 <-  --------->ANAC58            --------->ANAC58 --------->HSFB2a(2)  --------->ALFIN1<------NtERF2<---  --------->ANAC58           <---------LBD16  <---------LBD16<---------DEAR3(1)   --------->DEAR3(1)<  --------->ANAC46         --------->ETT(2)<----------DOF2<---------RAP2.3(3)    <---------LBD16<---- -----MYB52(1)  <---------SPL7--------->ANAC55(2) <---------ARR14(2)<---------------AtSPL3     <-----   tatccagccactctccggcgaaccgtatgtctacggaacagacctctttccggattcgcgacggcgccgagtggtactgcttcgccggagactaagtcgt  21328500       <-----------------AGL1     <---------WRKY18(1)    ----------->HVH21    --------->WRKY12                     ----------->HVH21     --------->ARR11(3)    --------->WRKY38(1)          <---------ANAC55(2)          <---------CCA1(2)  <-------GAMYB                  --------->ANAC55(2)        <------MYB83 <---------MYB46(3)              --------->ANAC58           <------MYB46(1) ---------TOE2(2)             --------->ARR14(2)         <---------ANAC58 -----NtERF2                  <---------MYB52(1)         <---------ANAC58 ------DEAR3(1)               <---------ARR14(2)        --------->ATHB12 ---------TOE1(2)            <-----------HVH21 <------ZmHOX2a(1) --NtERF2       <-----------HVH21--------->ANAC58      <---------YAB1                         ------- ------HVH21  --------->MYB59<---------RAP2.6(3)  <----------DOF2                           <--------   cggaggttgaccggcttaggtcagaccgagccgttacgcctcgctcacaggactttaatgcttggtatcttgatgttatagctagtgctgaactcgcgga  21328600                                                ------>ZmHOX2a(2)                                              --------->ARR14(2)                                          --------->ANAC55(2)                                          --------->ANAC58                                          <---------ANAC46                                          <---------ANAC55(2)                                          <-----------------AGL1                                         <-----------------------TaNAC69(2)          --------->MYB52(2)           --------->ARR14(2)          <---------ANAC58          <---------YAB1             <---------At4g35610          <---------ANAC58          <---------TOE1(3)          ----------->GT1 >>>>>>>>>GATA-1          <---------ANAC46       --------->ICU4<------ZmHOX2a(2)               <---------ARR14(2)        --------->ARR14(2)       =====================HOX2a_HOX2a              >>>>>>>>>GATA-4        <---------ARR14(2)       ------>ZmHOX2a(1)             --------->At4g35610    <---------LBD16              ======================HOX2a_HOX2a             >>>>>>>>>GATA-2  <---------SPL7              ---------->ID1  <---------ARR14(2)      <---------AHL20(2) -->LBD16<-------TEIL--------->YAB1 <---------TOE2(3)        <-----------RAV1(2)             <------- -LBD16<---------MYB52(1)--------->KAN4(2)--------->ANAC58 --------->GLK1(2)   >>>>>>>>>GATA-3   ttatggtccggttcgtggtactatggtcattcgtccttatggttacgcgatctgggaagcgattcaggtgaaaaaattgtggattcaaattgattttgaa  21328700              --------->ARR14(2)              <---------ARR14(2)                                                               ------  <---------TOE2(3)          <-------GAMYB                                      <-----------HVH21 --YAB1      <---------CCA1(2)                   <------ZmHOX2a(1)    ---------->DOF2   ----------->RAV1(1)   tgttgatgtttcttcgtatcgcctcaattttcgttgtgaattgttgatgcaggattatttgaatgtgaagttcaaagagactggtcatagcaacatgtac  21328800  Previous    Next  AGI:  At5g52520.1    Description:  OVA6/PRORS1 (OVULE ABORTION 6); ATP binding / aminoacyl-tRNA ligase. similar to tRNA synthetase class II (G, H, P and S) family protein [Arabidopsis thaliana] (TAIR:AT3G62120.1); similar to tRNA synthetase class II (G, H, P and S) family protein [Arabidopsis thaliana] (TAIR:AT3G62120.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN76962.1); similar to prolyl-tRNA synthetase [Raphanus sativus] (GB:BAC78195.1); similar to putative prolyl-tRNA synthetase [Oryza sativa (japonica cultivar-group)] (GB:BAC79747.1); contains InterPro domain Aminoacyl-tRNA synthetase, class II (G, H, P and S); (InterPro:IPR002314); contains InterPro domain Range:  from: 21328289    to: 21331406    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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