Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              --------->ARR14(2)       ------->GAMYB                     --------->HSFB2a(2)     --------->ANAC58           --------->ARR11(3)     --------->ANAC58           <---------ARR11(3)     <---------KAN4(1)     --------->ANAC46      ------>ZmHOX2a(2)   --------->ARR11(3)   --------->REM1(1)     --------->ARR11(3)    <---------ARR14(2)                             <------ <---------HSFB2a(2)     <-----------ARR10     <---------ARR11(3)                             <------ --------->HSFB2a(2)     <---------ARR11(3)    --------->ARR14(2)                             <------   tttctacaaccaagtattctcacccatgatctaagctcttcttgtagaatatctacaatattccatattctactacaagtctagtaatctacaatgcctt  21298600                                                                 <-------TEIL                                                               --------->ARR14(2)                                                               <---------ARR14(2)                                                             --------->LBD16                                                            --------->ANAC55(2)                                                            <---------HSFB2a(2)                                                            <---------ANAC55(2)                                                            <---------ANAC46                                                            --------->HSFB2a(2)     --------->AHL20(2)                          <----------DOF2                  <---------LBD16<---------At4g35610                        ----------------->AGL1           --------->ARR14(2)         --------->YAB1  --------->TOE1(2)<---------ICU4                        <---------ARR14(2)         <---------AHL20(2) ---ANAC46        --------->ICU4                      <---------YAB1     ------>ZmHOX2a(1) ---ANAC58  --------->HSFB2a(2)       <---------ATHB12<---------TOE2(3)<---------ANAC58 ---ANAC58  <---------HSFB2a(2)----------->GT1        <---------TOE1(3)<---------ANAC58         -----   gtttcatacgatttctagtaattagttcctttttagttaaatcaattctacagtttatggttccggattcatttcctgctaactaattatatcatttttt  21298700                                                                            <---------ICU4                                                                           --------->AHL20(2)                                                                           --------->ICU4                                                                           <---------AHL20(2)                                                                 ---------->DOF2         -------->ATHB1                                       --------->HSFB2a(2)         --------->ATHB12                                     <---------HSFB2a(2)         <---------ICU4                                   <---------ANAC58 <---------ATHB51         --------->YAB1                            <---------ZAT18        <---------AHL20(1)        <---------ATHB12                           --------->ZAT14       --------->YAB1        --------->ICU4                             --------->ZAT18 --------->ANAC58        <---------YAB1--------->ATHB51   ---------->DOF2  <---------ANAC58--------->AHL20(2)        < ---->YAB1           <---------YAB1  <----------ID1<---------ZAT14 --------->ANAC58     ------>ZmHOX2a(1)   ataactagtaatcattgaagcttataattgaaatctataactacaaagcctagtgcacttacgtccagaaagccaaaataattaggcttcctattaacac  21298800                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                              ------>NtERF2                                                                                             <-------                                   <---------ANAC58                                        ------>NtERF2                                   <---------ANAC58                                       --------->ANAC58                                 <-----------GT1           <---------ARR11(3)             --------->ANAC46                           --------->ANAC58             --------->AHL20(2)                --------->ANAC58                           --------->ANAC55(2)       --------->YAB1                   --------->YAB1                           --------->ANAC58        --------->AHL20(2)              --------->YAB1                   --------->ARR11(3)             --------->YAB1            --------->At4g35610<-----    <---------AHL20(2)     --------->ANAC46     --------->AHL20(2)          <---------At4g35610------    --------->AHL20(2)<----------DOF2       ----------->GT1--------->ARR11(3)   ----------->RAV1(1) ---------AHL20(2) <---------ARR11(3)  <---------AtLEC2 <---------AHL20(2)  --------->ZAT18<---------   atatatttatatgtttcttaagaacttttacgaaattacctgcatgtagttaaaataataaaatctaaactaattgtgagcacaacaataatccgccacg  21298900                                        <-------PIF5                                        <-------MYC3                                        <-------MYC4                                        ------->MYC4                                        ------->PIF5                                        ------->MYC2                                        ------->MYC3                                        <-------MYC2                                       <--------ABF1                                       ================================bZIP_DOF                                       <<<<<<<<<<AtMYC2                                       <<<<<<<<<<ABI5                                       <<<<<<<<<<HY5                                       --------->O2                                       <---------TGA1a                                       --------->TGA1a                                       <---------O2                                       --------->bZIP60(2)                                       --------->ANAC55(2)                                       <---------ANAC55(2)                                      ------>NtERF2                                     <------------OsbHLH66                                     <---------ALFIN1                                   ------>NtERF2                                   <-----------HVH21 --->ANAC58                        <-----------------PIF3(1) --->ANAC58                       --------->ANAC58 --->O2                           --------->ANAC46 ----O2                           --------->ANAC58 --->bZIP60(2)                   --------->MYB46(3)                       <---------ALFIN1 --ALFIN1                 <---------ZAT14                               ------>ZmHOX2a(1) ----TGA1a                --------->ZAT14                        <-----------GT1 --->TGA1a       --------->YAB1<---------ARR14(2)               <-----------GT1                    *TSS --HVH21       --------->AtLEC2--------->ARR14(2)           <----------DOF2                   <------   tcttctaaacctcttccattcaaaactcttcactatccgccacgtgtccccttcttcacactctttttatcttcctccacctctaaaactttctcaccac  21299000                                                      <---------DEAR3(2)                                                     <---------At1g77200            ---------->DOF2                                                     <---------DREB2C(2)          --------------->AGL15                                                     --------->ETT(1)            ----------------->AGL1     --------->LBD16                                <------NtERF2            --------->TOE2(3)    --------->LBD16                         <---------HSFB2a(2)              <---------DAG2      >>>>   <---------HSFB2a(2)                      --------->HSFB2a(2) <-------TEIL --------->TOE1(3)>>>>>>>   --------->HSFB2a(2)          --------->AtMYB61  <-----------HVH21 ----------->RAV1(1)   >>>>>>>>>TBF1  <---------LBD16              --------->ANAC46   --------->ALFIN1   ------->GAMYB<---------------AGL15 ---ALFIN1                   --------->REM1(1) <---------AtMYB61--------->SPL7   ----------------->AG   attttcccgagaaaacaaaaaaaaaaaacttacaccaaaacgatgtctggaggtgtcggtccaacgtacaacgacataaccttacccaaagaagaagaag  21299100                                                    <---------GLK1(2)                                                <------NtERF2                                                <---------LBD16                            <---------ICU4                                               ------>NtERF2                               --------->YAB1                      ----------->RAV1(1)      --------->MYB52(1)                         <---------YAB1                   --------->AtMYB61           --------->LBD16                          --------->YAB1                   --------->TOE2(3)          --------->ANAC46                          <---------ICU4                  --------->ANAC46           --------->MYB46(3)                        <---------ATHB12                <---------ALFIN1      --------->LBD16                                  --------->ICU4             --------->ARR14(2)     <---------LBD16 <---------ARR14(2)            --------->ANAC58         --------->ANAC58          --------->MYB52(1)      <---------YAB1         --------->ANAC58 >>>>>TBF1   <---------ARR14(2)   <---------ALFIN1--------->LBD16<---------ETT(1) --------->ANAC46 >>TBF1  --------->ANAC58        --------->MYB46(3) --------->ARR14(2)           ------>ZmHOX2a(1)   aagaacatcaaacccaatccacctcaacagtatcatccaccggaaaacccgccggattcttctcattccgacaactaaacatcctcgcaataatcatcgt  21299200                                                                                              -------                                                                                              -------                                            ==================================HOX2a_HOX2a     -------                                            <------ZmHOX2a(2)                               ---------               ----------->GT1             <---------ARR11(3)                              --------->MYB46(3)               --------->ANAC55(2)         --------->ARR14(2)                              --------->ANAC46               <---------ANAC55(2)         <---------ARR14(2)            <---------HSFB2a(2)<--------    --------->LBD16          <---------ARR11(3)                          --------->HSFB2a(2)---------   --------->ANAC46          --------->ARR11(3)------>ZmHOX2a(1)       ------>ZmHOX2a(1) --------->ANAC46  <---------LBD16   --------->MYB46(3) <-----------GT1           <<<<<<<<<TBF1    <-----------ARR10--   tctctccgcaagtggtctcgtaacaatccaagatttcatattcacgatcctcactctcatctacttcttcttcctctcgaaacttatcttcccaccacac  21299300                                                   --------->ARR14(2)                                                   ------->TEIL                                                   <-----------ARR10                                                   <---------ARR11(1)     ------>ZmHOX2a(2)                                                   <---------ARR14(2)   --------->ARR14(2)                                                  <---------CCA1(2)     <---------ARR14(2)                                                  <---------ARR14(1) <------NtERF2                                                 --------->LBD16    ------>NtERF2                                                <---------ANAC46    --------->LBD16                                                --------->ANAC55(2)--------->ALFIN1                                                <---------ANAC55(2)<---------ANAC46             -----                                                <---------ANAC58  <---------LBD16              ------                                          --------->ARR11(3)      --------->ATERF1(1)          ======                                          --------->ARR14(2)      <------NtERF2               <------ZmHOX2a(2)                                          <-----------ARR10      <---------RAP2.3(1)          ======= -->ANAC58                                <---------ARR11(3)    <---------DEAR3(1)           <------- -->ANAC58                                --------->ARR14(3)   <---------At4g35610           -------- -->ANAC46                                <---------ARR14(3)   --------->At4g35610    <---------ICU4 >AtMYB61                  --------->ANAC58     <---------ANAC55(1)<---------DEAR3(1)<---------ATHB12 -ALFIN1  <-----------HVH21--------->ANAC58     <---------ANAC58<---------RAP2.3(2)  <---------YAB1 -->RAV1(1)----------->HVH21              --------->GLK1(2) <---------At5g28300  <---------ANAC58 ------->MYB46(3)   ------>ZmHOX2a(1) --------->YAB1        ---------->DOF2      <---------ANAC58<---   aacaatccaaaccgtgacgctcctctcacaagctccacaaacaaaatcttccgtatctatgttacagcggcggggatcgtcgggcttatcattccgatct  21299400                                                           <-------PIF5                                                           ------->MYC4                                                           <-------MYC4                                                           ------->MYC2                                                           ------->PIF5                                                           <-------MYC2                                                           ------->MYC3                                                           <-------PIF4                                                           ------->PIF4                                                          <---------ANAC55(2)                                                          <---------O2                                                          <---------TGA1a                                                          --------->O2                                                          --------->ANAC55(2)                                                          --------->TGA1a                                                          ===================bZIP_DOF                                                         ------------>OsbHLH66                                                        <------------OsbHLH66                                                      --------->DEAR3(1)                                                     --------->ANAC58                                                     --------->ANAC58                                                   <---------ALFIN1                                                  --------->ZAT14                                                  <---------ABI4(2)                                               ----------->RAV1(2)          <---------TOE1(2)                    <---------ZAT2                          <---------HSFB2a(2) --------->REM1(1)                   --------->ALFIN1--------->ANAC46                  --------->HSFB2a(2) ------>GT1                     --------->MYB52(1)<---------ZAT14                      <---------TOE2(3) >ZmHOX2a(2)              --------->YAB1       --------->ZAT2 <---------CCA1(2)     <---------YAB1 =============================HOX2a_HOX2a      <---------At4g35610              <---------GLK1(2) =============================HOX2a_HOX2a      --------->At4g35610              --------->ARR11(3) --ARR14(2)              <---------YAB1      <-----------RAV1(2)  <----------DOF2<---------RVE1(1) ->ARR14(2)            <------ZmHOX2a(1)    <---------ZAT18<-------MYC3 <---------ANAC58     <------ZmHOX2a(1) --------HVH21       <---------TOE2(3)<-----------HVH21 <---------ALFIN1<---------ANAC58    ---------   gttacatcttcgaaggaatcgttgaggatgataagaacggtgttagcgcagctgcaccgcacgtgtttcttttagcgagtcagatttttatggaaggatt  21299500  Previous    Next  AGI:  At5g52415.1    Description:  pseudogene, hypothetical protein Range:  from: 21297130    to: 21298524    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g52420.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23920.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO49441.1) Range:  from: 21298999    to: 21300032    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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