Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->ANAC55(2)                                                            <---------ANAC55(1)                                       <---------bZIP60(1)  <---------ANAC46                                       --------->bZIP60(1)  <---------ANAC58                              <---------ANAC58              <---------ANAC55(2)                              <---------ANAC58              <---------ANAC58                            <-----------GT1                <---------TOE2(3)<------ZmHOX2a(2)                        <---------AHL20(2)                <-----------GT1   =========================                       --------->AHL20(1)           <---------AHL20(2)     --------->ARR11(3)                       <---------AHL20(1)          --------->AHL20(2)      <---------ARR11(3)   <---------At4g35610 --------->AHL20(2)          <---------AHL20(2)  ---------->DOF2             <- <-----------GT1      --------->AHL20(2)          --------->YAB1      --------->AHL20(2)         <--- ---GT1 <----------DOF2<---------AHL20(2)  --------->WOX13(1)    --------->AHL20(2)   --------->YAB1   tatttagctcctttgtaaatacaaattaattttcgttcttgacatcattcaattttaattttacgtataaaataaaagatcatacctattagaacgatta  21257700                                                                --------->TOE2(3)                                                               ----------->GT1                                                               --------->ANAC46                                       <---------YAB1        <---------DOF5.7(2)                                     --------->YAB1        --------->DOF5.7(2)                                  --------->MYB52(2)     <---------ANAC46                                  <---------MYB46(3)  --------->ANAC58                              <---------ANAC46        --------->ANAC46                              <---------ANAC58      <---------ALFIN1 =====HOX2a_HOX2a             <---------ANAC58    <---------ALFIN1                                  - -----ZmHOX2a(1)       <------ZmHOX2a(1)--------->YAB1--------->ANAC58                             -- ------TOE2(3)   --------->YAB1 <---------MYB52(1)----------->RAV1(1)          --------->ATHB12   ---   aggagaaatacaattcgaatgagaaggatgtgccgtttgttataataaacagccacacgacgtaaacgtaaaatgaccacatgatgggccaatagacatg  21257800                                                                                                   --           -------->HAHB4                                                       ----------->GT1   ---           --------->YAB1                                                       <----------ID1    <--        --------->YAB1                                                        =======================       <---------------AGL15                                                 ------------------------       --------------->AGL15                            >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>      ----------------->AGL3                         --------->bZIP60(1)----------->GT1       -------      ----------------->AGL2                 --------->YAB1            ------------------------>ANAC81      <-----------------AGL2                <---------YAB1             ----------->GT1        =======      <-----------------AGL3               --------->ARR11(3)         --------->DAG2     --------->AHL20(2)  ------>MYB46(1)     <-------TEIL         <---------ARR11(3)  ---------->DOF2---------->DOF2--------  ------>MYB83--------->YAB1   <------ZmHOX2a(1)     <---------bZIP60(1)<----------ID1  --------->AHL20(2) -------->DREB2C(2)  <-----------GT1  --------->AHL20(2)>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>> ------->DEAR3(2) ----------->GT1 ----------->GT1  <---------DDF1    --------->DAG2     <---------AHL20(2) ---->TEIL<---------YAB1     <---------TOE2(3)   --------->DEAR3(2) ---------->DOF2 --------->AHL20(2)   gaccgactactaataatagtaagttacattttaggatggaataaatatcataccgacatcagtttgaaagaaaagggaaaaaaagaaaaaataaataaaa  21257900          ========================================bZIP_DOF          =======================bZIP_DOF        <---------DDF1        >>>>>>>>>>DREB2A        >>>>>>>>>>DREB1A       >>>>>>>>>>DREB1C       >>>>>>>>>>DREB2A       >>>>>>>>>>DREB1A                                                                   --------->ANAC58       >>>>>>>>>>DREB1B                                                                   --------->ANAC58       ------->GAMYB                                                                 --------->ANAC58       --------->DREB2C(2)                                                           --------->ANAC46       --------->At1g77200                                                           --------->ANAC58       >>>>>>>>>>AtTINY2----------->GT1                                           ----------->HVH21       =============MYC_MYB                                                      <-----------HVH21      --------->DEAR3(2)--------->ANAC58      <---------REM1(2)                  <-----------TGA1     --------->MYB52(1)--------->DAG2        ------>NtERF2                      <<<<<<<<<<HY5    >>>>>>>>>>>>>>>>DREB1A                   <---------RAP2.6(3)                --------->TGA2(1)    >>>>>>>>>>>>>AtTINY2--------->ANAC58     ----------->RAV1(1)                --------->ANAC55(2)  >>>>>>>>>>>>>>>>>>>>>DREB1A               <---------ETT(1)                    <---------TGA2(1)  >>>>>>>>>>>>>>>>>>>>>>>>>>>>>DREB1B       --------->DEAR3(1)                  =====================  >>>>>>>>>>>>>>>>>>>>>>>>>>>>>DREB1C       ----------->HVH21                   <---------bZIP60(1) >>>>>>>>>>>>>>>>>>DREB2A                   >>>>>>>>>>DREB2A                    --------->ANAC46 ------->CCA1(2)      ---------->DOF2       --------->RAP2.6(2)                 <---------TGA1a ------>ARR11(3)   <---------HSFB2a(2)      >>>>>>>>>>DREB1A                    --------->TGA1a -------ARR11(3)   --------->HSFB2a(2)     --------->DEAR3(2)                   --------->bZIP60(2) ===================bZIP_DOF            >>>>>>>>>>>>>>>>>>>>>DREB2A             --------->bZIP60(1) >ANAC81<---------RAP2.6(3)             >>>>>>>>>>>>>>>>>>>>>DREB1A             <---------O2 >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>DREB2A  ---------->DOF2          ----------->GT1 --------->O2 --->DOF2 --------->TGA1a             <------ZmHOX2a(2)   --------->REM1(2)    <-----------STF1     > ===================bZIP_DOF         <---------ARR11(3)--------->ANAC58    ========================== ->AHL20(2)    --------->GLK1(1) ---------->DOF2    --------->ARR14(2)     ===============bZIP_DOF  > >>>>>>>>>>>>>>>>>>>>>>>>>>>>>>DREB1A--------->ARR11(3)--------->ANAC58    <----------DOF2--------->ANAC46   gatatactaccgacatgagttccaaaaagcaaaaaaaaagatcaagccgacacagacacgcgtagagagcaaaatgactttgacgtcacaccacgaaaac  21258000                   <---------CCA1(2)                 <---------DAG2                 <----------DOF2             ---------->ID1         >>>>>>>>>>AREB1         <---------ANAC58         >>>>>>>>>>AREB2         <---------ANAC55(2)         ===================bZIP_DOF         <---------ANAC55(1)         <---------TGA1a         --------->TGA1a         --------->ANAC55(2)         --------->O2         <---------ANAC58         <---------O2                                                                           <---- ===========================bZIP_DOF                                       --------->ARR14(2)   ----- >>>>>>>>>>>>>>>>>>>>AREB2                                 ------>ZmHOX2a(1)                   <----- ==================bZIP_DOF                            <---------ALFIN1    *TSS    xxxxxxxxxxxxxxxxxx >>>>>>>>>>>>>>>>>>>>AREB1                 --------->TOE2(3)               <---------ARR14(2)--------   agacgcttcatacgtgtccctttatctctctcagtctctctataaacttagtgagaccctcctctgttttactcacaaatatgcaaactagaaaacaatc  21258100                                                                                    --------->ANAC58                                                                                  --------->ANAC46                                                                                 ------->GAMYB                                                                               <---------REM1(2)                                                                            <---------ATHB12                                                                           --------->ANAC58                                        --------->ARR11(3)                 --------->ANAC58                                        --------->GLK1(2)                  --------->ANAC46       <--                                       --------->RVE1(1)                 --------->AtMYB61       <---                                       --------->CCA1(1)                --------->MYB46(3)   <-------                                ----------->GT1                       --------->AtMYB61     ---------                     --------------->AGL15                           <---------MYB55(2)     ---------      ---------->DOF2<---------------AGL15                           --------->MYB46(3)     <--------  <------ZmHOX2a(1) <-----------------AG<---------ARR11(3)         <---------ARR14(2)    --------->ZAT2 -----ICU4          <-----------------AGL1                         --------->ARR14(2)   --------->ANAC46 ---->YAB1          <-----------------AGL2                        <------ZmHOX2a(1) --------->ANAC58 ----ATHB12         <-----------------AGL3              =================HOX2a_HOX2a--------->ANAC46 xxxxxxx>smallRNA(se3)        ---------->DOF2           <------ZmHOX2a(2)<---------ALFIN1--------->At4g35610 ->WOX13(1)         =================================================================================   atcaggaataaagggtttgattacttctattggaaagaaaaaaatctttggaaaatggatcaaacagaggaaccaccactcaacacacaccagcagcacc  21258200        --------------->AGL15        <---------YAB1        <---------------AGL15     --------->GLK1(2)    <---------GLK1(2)  <-------TEIL  ----------->ARR10 <--------P -------TOE2(2) --------RAV1(2)                          <---------ARR14(2)                     <-------TEIL --ALFIN1                   <---------AHL20(2)--------->At4g35610               --------->CCA1(2) >ZAT2 ----------------->AGL3             --------->ARR14(2)                   <---------ARR14(2) >At4g35610               <---------AHL20(2)  ------>ZmHOX2a(1)             <---------TOE2(3) -At4g35610      <---------GLK1(2)   ----------->HVH21               <---------YAB1 ========================MADS_MADS --------->ANAC55(2)<---------AHL20(2)<----------DOF2            <-   caggtagattctaatttcagaaacttatattttttttaagtgacaatcctctgaatttacttaaacttattgtgatttatggatacagaagaagttgaac  21258300                                  ---------->DOF2                                        --------->YAB1                             ---------->DOF2                                            <---------ATHB12                            <------ZmHOX2a(1)                                           --------->ICU4                          <---------TOE2(3)                                        --------->ANAC58 <---------YAB1     --------->ARR11(3)                                             --------->ANAC58 --------ICU4       <---------ARR11(3)     <---------ZAT6                        ---------->DOF2   atcatgagaatggtgcgactaagatgtttaggaaagtaaaggctagagctaagaagttcaagaacagtctcactaaacatggacaaagcaatgagcatga  21258400             <-------GAMYB            <------MYB83            <------MYB46(1)            --------->STY1(2)           <---------AtMYB61           <---------STY1(2)       --------->ATHB12        --------->YAB1      --------->ICU4           <---------ICU4      <---------YAB1          --------->ICU4                             <----------DOF2    --------->YAB1            <---------YAB1                       ----------->GT1   <------ZmHOX2a(2)        --------->YAB1                     ------->TEIL  <---------ARR11(3)       <---------YAB1     ----------->RAV1(2)<-----------RAV1(2)   <-------TEIL  --------->ARR11(3)       --------->ICU4   <<<<<<<ZML2  ------>ZmHOX2a(2)   <----------DOF2       <-   gcaagatcatgatttggttgaagaagatgatgatgatgacgagctagaacctgaagtgatcgatgcaccaggttactttcttttgtagtttcattcaact  21258500                                               <------MYB83                                               <------MYB46(1)                                            <---------MYB52(1)                                       <---------DOF5.7(2)                                       --------->MYB52(1)                                ----------->HVH21       <---------ARR14(2)                              <---------ANAC46--------->MYB59                              <---------AtLEC2--------->MYB46(2)                              <---------ANAC58--------->MYB111(1)  ----------->HVH21           --------->ATHB12   <---------ANAC58<---------AtMYB61  <---------ANAC58   ------>ZmHOX2a(2)          --------->ANAC55(2) <---------ARR14(2)    ----------->GT1 <---------ARR11(3)           <---------ANAC55(2) --------->ARR14(2)--------->MYB52(1) --------->ARR11(3)   <---------AHL20(2)<---------At5g28300      <---------ANAC58 --------YAB1  <---------MYB46(3)    --------->DOF5.7(2)--------->ARR14(2)                 <---------TOE2(3)   tatgatctaaaaactattggttattcaattttgcgtgacattaacggtttggtatctgtatatgcaggcgtaacaggtaaacctagagaaactaatgttc  21258600  Previous    Next  AGI:  At5g52310.1    Description:  COR78 (COLD REGULATED 78). Identical to Low-temperature-induced 78 kDa protein (LTI78) [Arabidopsis Thaliana] (GB:Q06738;GB:Q04981); similar to LTI65/RD29B (RESPONSIVE TO DESSICATION 29B) [Arabidopsis thaliana] (TAIR:AT5G52300.1); similar to LTI65/RD29B (RESPONSIVE TO DESSICATION 29B) [Arabidopsis thaliana] (TAIR:AT5G52300.2); similar to stress responsive protein [Brassica oleracea var. acephala] (GB:AAR21079.1) Range:  from: 21258075    to: 21260839    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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