Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 <---------AHL20(2)                              --------->AHL20(1)                             <---------AHL20(2)                         <---------AHL20(2)                           -------->P                         --------->AHL20(2)                           ------>MYB83----------->RAV1(2)                     <---------AHL20(2)                               ------>MYB46(1)           <---------ANAC55(2)<---------AHL20(1)                    <---------MYB59           --------->ANAC55(2)<---------AHL20(2)                 <---------ARR14(2)    <-------------   --------->ANAC58  --------->AHL20(2)                          --------->ARR14(2) ----------->HVH21   --------->ANAC58 --------->AHL20(2)                     --------->DAG2       <-----------GT1 --------->ZAT6     <---------AHL20(2)   <-----------GT1  ---------->DOF2    <----------DOF2 ------>ZAT14 ------->TEIL   --------->AHL20(2)       <----------ID1--------->TOE1(2)  ============== -------REM1(2) --------->ICU4--------->AHL20(2)    ---------->DOF2 --------->TOE2(2) <<<<<<<GRF7  <-   ttcacactcactcatgtaactattaatttaaattaatttgaataaaccctacaaaaaagaaaaagcgtaacctactactctttaacctgacaaaaaatgg  21243700                                                                                                   <-                                                                                                   <-                                                                                               <-----                                                                                         --------->DAG2                                                                                        ---------->DOF2                       <----------DOF2                                                --------->YAB1                   --------->ZAT18                                               <---------ATHB12 ---                   --------->ZAT14                                              --------->ANAC58 ----                   <---------ZAT14                    --------->TOE2(3)         --------->ANAC46 <---              ---------->DOF2                         --------->YAB1            ------>MYB83   ------           --------->AtLEC2                          <<<<<<<<<ARR1              --------->ANAC58<----      <-----------GT1  <---------DAG2       --------->AHL20(2)             --------->ANAC58    <----- ----AGL3<---------------AGL15  <-----------GT1      <<<<<<<<<ARR2         --------->ANAC58   <------ ========================MADS_MADS      --------->AHL20(2)            --------->ANAC46--------->AHL20(2) --------At4g35610 <---------ZAT18      <---------AHL20(2)   <----------DOF2    ------>MYB46(1)<-----   aagctaattttccatacaaagttcactttatattatacaagtttaattacatacaatcttagacttttttgtaagtcacaccaagcaataaaaagggagg  21243800   --------->ALFIN1 <---------ANAC46 <---------ANAC58 <---------ANAC58                                                                                   - -----MYB83                                                                                        <- -----MYB46(1)                            <---------AHL20(2)              <---------DAG2       <----- -MYB83                             <---------ALFIN1                 --------->ANAC58          ------ ------>ALFIN1                      ------->GAMYB                    --------->ANAC58          ====== ----->ALFIN1              --------->AHL20(2)                      ---------->DOF2     --------->AHL20(2) -----P    --------->AHL20(2)       ----------->RAV1(1)       ---------->DOF2          <---------AHL20(2) --->MYB55(2)        --------->PCF2--------->MYB46(3)       --------->YAB1<----------DOF2  --------->AHL20(2) ---GAMYB  <---------AHL20(2)     -------->P             <---------------AGL15        --------->AHL20(2) ----MYB46(3)       <------ZmHOX2a(1)     --------->AHL20(2)--------->AHL20(2)        <---------ATHB12 ---AtMYB61<---------AHL20(1)    --------->WOX13(1)      ============================================ -MYB46(1)--------->AHL20(2)     <-----------GT1         --------------->AGL15      --------->WOX13(1)   ttggggtgtctattaaatttaaggacccataaaatcaaccacatttatatgccttactgcaataaaaagaaaagcacttttcaattcaattaataaacta  21243900             ------>ZmHOX2a(1)     <---------AHL20(2)  ----------->GT1 --------->DOF2                ---------->DOF2 --------AHL20(2)         --------------->AGL15 --------->DAG2 ----------AGL15     --------->YAB1            ---------->DOF2                                    <-- --------->AGL15  --------->WOX13(1)    ----------->GT1                                           --- =========================================MADS_MADS                      <-----------GT1  --------->AHL20(2) ==========MADS_MADS<---------ATHB12----------->GT1                   --------->YAB1  <---------TOE2(3)   ttaaaagttaatttcctactcaatcaaacccattaaagcagtaagaaaaaaaagggtttagatggaatctactaataactcactgattaagttttaatat  21244000                          <---------------AtSPL8       <---------SPL7    <------------CBF     <---------------AtSPL8                 <---------ICU4     <---------------AtSPL3      --------->ANAC58  --------->DAG2    <----------DOF2        <---------YAB1  *TSS     <-----------RAV1(1) ---------->DOF2   --------->TOE2(3)---------->DOF2       --------->WOX13(1)                ------>ZmHOX2a(1) -------AHL20(2) -------->P      --------->ANAC46      --------->At5g28300               ------>ZmHOX2a(1) ------>AHL20(2) ------->TEIL    --------->ANAC58     ----------->GT1 ---------->ID1 <-----------GT1   taaaaaagttgtacgaatcaacctttatattgtacaaggaaagtgatcatcgcagactgtaaatcaggttttgttgttttgttttagtttcctcctacat  21244100                                   --------->GLK1(2)                                   --------->ARR14(2)                                   <---------ARR14(2)                                             <--                           --------->GLK1(2)    <-------GAMYB                     --------->ICU4  ===   tctttggaagaaactaatacaaatcagagaatttgagaatccaaattttgggttgaagaagtttttgtttctgtagagaaaacaatgtttaagtcatgga  21244200              --------->ARR11(3)                         <---------ANAC46              <---------ARR11(3)                   <---------TOE2(2)                        <--------      --------->ANAC58                            <-----------RAV1(2)                      --------->AHL20(1)      --------->ANAC58                         <---------At4g35610                         <---------AHL20(1) <----------ID1                                --------->At4g35610                         <---------AHL20(2) --------->ANAC58                          --------->ANAC58                  --------->TOE2(3) --------->ANAC58                          --------->ANAC46             --------->AHL20(2)--------->YAB1 ----ZmHOX2a(1)<------ZmHOX2a(2)           --------->ANAC58           <----------DOF2     --------->AHL20(2) =====================HOX2a_HOX2a        <-----------RAV1(2)      ---------->ID1         <---------ATHB12   ggaacgacaagaacaagatcaaggctgtgttcaaacttcagtttcaggcaactcaggttttgtgttttgtctctttaaatctcaaaacccaattatattt  21244300                                          <---------MYB52(1)                                       ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                                            --                                     --------->AGP1                                              <---                                     <---------AGP1                                              ----                                     --------->ARR14(2)                                   <---------LBD16                                     <---------ARR14(2)                                   --------->LBD16                                     <---------ARR11(3)                               --------->ARR11(3)                                  --------->HSFB2a(2)                   ------->TEIL  <---------ARR11(3)                                  <---------HSFB2a(2)                <---------YAB1   --------->GLK1(2)                            <---------ARR11(3)               --------->ARR14(2)       --------->ARR14(2)    <---------AHL20(2)      <---------AHL20(1)               <---------ARR14(2)       <---------ARR14(2) -YAB1                <-----------GT1--------->ARR11(3)      <---------ARR11(3)----------->GT1<------   ctctgttaaattcagacaatgtgtttactatatattctagatctgttaactcttaagtttcaagatttgttatgaatgtgaatgtgaaaatctggggatg  21244400            --------->ZAT2            <---------ZAT2            --------->At4g35610       <------NtERF2     --------->ALFIN1   --------->ZAT2   --------->At4g35610   <---------ZAT2   <---------At4g35610                --------->ATHB12  <---------TOE1(2)                  <---------YAB1                                      <---------TOE2(3) <-----------RAV1(2)                ------>ZmHOX2a(2)                     <---------TOE1(3) ---->ZmHOX2a(2)                  --------->ARR11(3)                      <---------TOE2(3)   ------- ------ARR11(3)               --------->YAB1                      ----------->RAV1(1)    <---------TOE1(3) ----->ARR11(3)            <----------DOF2                    --------->ANAC58     <---------GLK1(1) ---KAN4(2) <---------At4g35610   <---------ARR11(3)          --------->ANAC58     --------->GLK1(1)   atctcaggtgccgaagctgaagaagactgctttgatgatctcattggtacctgatgatgttgggaagccaacatttaagcttgagaaatctgaggttaaa  21244500                                                                                 <---------ARR11(3)                                                                                 <---------ARR14(2)                   <---------ARR14(2)                                            --------->ARR11(3)                   --------->GLK1(2)                                             --------->ARR14(2)     ------>ZmHOX2a(2)                                                  <---------ANAC58    <------ZmHOX2a(2)                                                   <---------ANAC58   <---------ARR11(3)                                               --------->KAN4(1)<---------At5g28300   --------->ARR11(3)                           ---------->DOF2     <---------MYB46(3)         <-----   <---------ARR14(2)           <-----------HVH21                   <---------HSFB2a(1)      <-------GAMYB   --------->ARR14(2)     <---------AHL20(2)  <---------ATHB12     <---------KAN4(2)<-----------GT1 --->DOF2          --------->ARR14(2)    <---------At4g35610 --------->TOE1(2) ----------->ARR10   gaagggatctgttcatgggagaatccaatttatgtgtcagtgaagctaatcaaagaaccaaaaactgggattgttcgtgagaagatttaccatttcgttg  21244600  Previous    Next  AGI:  At5g52280.1    Description:  protein transport protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G63300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17243.1); contains domain PD023692 (PD023692); contains domain PTHR23160 (PTHR23160) Range:  from: 21244059    to: 21247480    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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