Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->MYB52(1)                        <---------TOE2(3)                        <---------YAB1                  <----------DOF2   <----------DOF2              ----------->GT1            <--------               <-----------GT1--------->ICU4                   <---------ICU4               <--------              <<<<<<<<<<GT-3b <---------YAB1                  --------->ICU4                --------- --------->TOE2(3)<---------------AGL15                       <---------YAB1            ---------->DOF2   ttttcttaaaacttatttttcttttcgaggttatgattctttttagttttttttatcaaatttcatgatgaaaataactgaattgaacatcaaagatttt  21229900                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              <------        <---------ZAT14                                                                       -------   <---------ARR14(2)   <-----------GT1                                          --------->GLK1(2)   --------->ARR14(2)--------->TOE2(3)         <-----------ARR10                 --------->ARR11(3) -GLK1(2)          <-----------GT1            <---------CCA1(2)                  <---------ARR11(3) -ARR11(3)     <----------DOF2              --------->ANAC55(2)          <---------ANAC46    <------- >ARR11(3)     <---------DAG2             --------->AHL20(2)   <----------DOF2   <-----------ARR10  <   cagaaaatactctactgcttttttcttaactatattctagccatttacatatctaagcttgatgtcttttctatttcgtcgaaaatctatctattttacg  21230000 --->ANAC46                                                                                   <------ ----RAP2.6(2)                                                                                <------ ---At5g28300                                                                   --------->HSFB2a(2) ---LBD16                                                                    <---------------AGL15 -->RAP2.6(3)                                                  --------->ATHB12 <---------HSFB2a(2) ----GT1                                --------->ZAT6        <---------YAB1 --------------->AGL15<-- ------NtERF2                     --------->ZAT6 <---------TOE1(2)        <-----------GT1  <---------   gcagagacttgaaacccgaattttgacatatcaaaaacactaacacaatcccatgtactacattatcatttgtattttacttatagaagaaaataacttt  21230100                                                      <---------ARR11(3)                                                      --------->ARR11(3)  --------->AHL20(2)                                  --------->GLK1(2)           <-----------GT1 ---  <---------AHL20(2)             <---------ZAT18     --------->RVE1(1)           <---------AHL20(2) ---DAG2                 --------->ICU4              --------->CCA1(1)   <---------At4g35610    ----- ----DOF2              ---------->DOF2   <---------ICU4       --------->MYB59    <-----------GT1----- -------AHL20(2)    --------->YAB1       <-----------GT1--------->TOE2(3)--------->At4g35610 -------- --GT1        ----------->GT1    --------->ZAT18<---------AHL20(2)<---------MYB46(3) <----------DOF2-   ttatttaaaaattgtatggtaaaaataaagattagttccctaataactatataaaaaatcttattcggtcgttttagctgtatttaacttttaaacccaa  21230200                          <---------------AtSPL8                    --------->ANAC58                    --------->ANAC58                  --------->TOE1(2)                  ------->GAMYB         ------------>CBF <---------------AtSPL3 ------->DOF2    --------->MYB46(3)                                                                 < ---->ANAC58    -------->P--------------->AtSPL3      --------->MYB46(3)                        ----- ---->ANAC58 <---------ATHB12                       ------>MYB83--------->STY1(2)   *TSS        ----- ->TOE1(2) --------->WOX13(1)                       ------>MYB46(1)                <----------DOF2 <- ---------->GT1--------->WOX13(1)                --------->ANAC46        ---------->DOF2 ---------->DOF2   gaaagaaaaaaatcaatcaaccaaggaagtagtacaacaacaagagtcaaaacccaacaactctctatctagcacaaaagcctgacttttacaaagacaa  21230300                                       --------->ANAC46                              ------>ZmHOX2a(1)                          <-----------ARR10         --------->ANAC46 --------->ARR14(2)   <---------ANAC46        ------->GAMYB     <---------ARR14(2)   <---------ANAC58                       <---------ANAC58       <---------ALFIN1   --------->GLK1(2)    <---------ANAC58                     --------->AtLEC2 ----------DOF2    ==================HOX2a_HOX2a                              --------->WOX13(1)  <-- ---->ANAC58       ------>ZmHOX2a(2)   --------->ANAC58                    --------->ANAC58    ------ ---->ANAC58     <---------ARR11(3)    --------->ANAC58                    --------->ANAC58    <----- --------DAG2    --------->ARR11(3)  ---------->DOF2                  ---------->DOF2 <---------ANAC58   gccttttcaacacactactgatcttgagaatcctctcttcaaagccatggcgttagaactatggcaaactctcaaagaagcaatccatgcttacacaggt  21230400                                                                                                -----                                                                <------MYB83                  -------                                                                <------MYB46(1)               <------                     <---------ZAT14                      <-----------RAV1(2)                ------->GAMYB     <-----------RAV1(1)                          --------->ANAC58                           --------     ------>ZmHOX2a(1)                            --------->ANAC58<---------ANAC58          ---------   ----------->RAV1(2)                            --------->ANAC46<---------ANAC58    <---------YAB1 --------DOF2        --------->ZAT14              --------->bZIP60(2)          --------->SPL7-------- --->ARR11(3)   <---------ZAT14       --------->ANAC46 --------->At4g35610    <---------MYB52(1)<---- ----ARR11(3)   --------->ZAT14     <---------ATERF1(1)<---------At4g35610   <---------SPL7 ---------   ctttctcctgttgtcttcttcactgctctagctctcgccttcgccatttaccaagtcatctcaggctggtttgcctcgccgttcgatgatgttaaccgac  21230500                                          --------->TOE2(3)                --------->ALFIN1                                       <---------ARR14(2)           <---------LBD16             <---------ANAC58          --------->ARR14(2)          --------->MYB52(1)            =====================HOX2a_HOX2a                      ===============HOX2a_HOX2a            ------>ZmHOX2a(2)         <---------GLK1(2)           <------ZmHOX2a(2)           <------ZmHOX2a(2)       <------NtERF2                  ==================HOX2a_HOX2a           =========================HOX2a_HOX2a                  --------->ARR11(3)           ======================HOX2a_HOX2a                    --------->bZIP60(1)          <---------GLK1(2)       ------>NtERF2                 <---------At4g35610          --------->AGP1         --------->DEAR3(1)             --------->At4g35610          --------->ARR14(2)    --------->MYB46(3)              <---------bZIP60(1) ---->bZIP60(1)                 --------->ATERF1(1)        <------MYB46(1)=========================== ---->RAV1(1)<---------ANAC58   <---------ABI4(2)          <---------DEAR3(2) ---DDF1----------->ARR10  --------->ALFIN1------>ZmHOX2a(1)<-----------HVH21  --------->At4g35610 ->ANAC46 --------->ARR11(3)   <---------ATERF1(1)         <------MYB83   <------ZmHOX2a(1) >MYB46(3)<---------ARR14(2) --------->ATERF1(1)          <---------DEAR3(1) <------ZmHOX2a(1) ->DREB2C(2)========================HOX2a_HOX2a           <---------DREB2C(2)======================== -----bZIP60(1)           <------ZmHOX2a(1)==============================HOX2a_HOX2a      --------->SPL7 >DEAR3(2)<---------ARR11(3) <------ZmHOX2a(1)           <---------------------WRI1   --------->ZAT6-   atcagagagctagatccttggctcaagaggaggagccaccgattcctcagcctgttcaagtcggtgagatcacggaggaggagcttaaacagtacgatgg  21230600           --------->ANAC58                   --------->YAB1           --------->ANAC58               ------>ZmHOX2a(2)         ---------->DOF2                 <------ZmHOX2a(2)      ------>ZmHOX2a(1)                 --------->ARR14(2)     --------->TOE2(3)                  <---------ARR14(2)    ------>ZmHOX2a(2)                   --------->ARR11(3)    ----------->GT1                 <------MYB83  <---------ARR14(2)                    --------->AGP1        --------->At4g35610             <------MYB46(1)  --------->ARR14(2)                    <---------ARR11(3)  <-----------RAV1(2)              <------- ==========HOX2a_HOX2a                  <---------AGP1 --------->ANAC46            --------->DAG2 ==========HOX2a_HOX2a                 <---------CCA1(2)---------->DOF2           ---------->DOF2 ---------->ARR10                 --------->YAB1----------->GT1             ------->TEIL     --------   ctctgatcctcaaaagccccttcttatggctatcaaacatcagatctatgatgttacacaaagcaggtgaaatttctgaatctaaaaagcgaaattaggt  21230700                                                                            --------->DAG2                                                                           ---------->DOF2                                                                       ------>ZmHOX2a(2)            <                                                                     <---------ARR11(3)      --------                                    <---------ANAC58               <---------YAB1           ---------                    ------>ZmHOX2a(1)    ---------->DOF2         --------->YAB1          ----------->GT1 --TOE2(3)--------->ATHB12          <---------ANAC58          <----------DOF2            --------->YAB1 ->MYB59 <-------TEIL               <---------ANAC46 <----------DOF2 --------->ARR11(3)--------->GLK1(2)   tatgggtttgattcattgtttcctctaatcttgttttagcgtataaagacttggactttgcatacttttatgatctataaagctgtgagaatcgtaaagt  21230800  Previous    Next  AGI:  At5g52240.1    Description:  MSBP1 (MEMBRANE STEROID BINDING PROTEIN 1). Identical to Membrane steroid-binding protein 1 (MSBP1) [Arabidopsis Thaliana] (GB:Q9XFM6;GB:Q9LTJ7); similar to ATMP2 (MEMBRANE STEROID BINDING PROTEIN 2), heme binding / transition metal ion binding [Arabidopsis thaliana] (TAIR:AT3G48890.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62209.1); contains InterPro domain Cytochrome b5; (InterPro:IPR001199) Range:  from: 21230284    to: 21231965    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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