Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->WOX13(1)                                                                     --------->YAB1                                                                     <---------ICU4        ----------                                                                     <------------ATHB5   --------->LBD16                                                                     -------->ATHB1      --------->LBD16                       <-----------GT1                              <---------ATHB12    <---------HSFB2a(2)                  ----------->GT1                                 --------->WOX13(1)    --------->HSFB2a(2)              ---------->DOF2   <-----------GT1                 ------>ZmHOX2a(1)    --------->ARR14(2)          <---------ATHB12--------->TOE2(3)                <----------DOF2           <---------ARR14(2)        --------->WOX13(1)<---------MYB59               <-----------GT1      --------->ANAC46 >At4g35610--------->YAB1 --------->TOE1(3)    ---------->DOF2 --------->TOE2(3)    <---------GLK1(1)   gtaatggtttcaatcagaaagggtttaacctaaataaccaattgatatcaaaagcttatcactttcctcaatcattcacccataacatatcccgaaagac  21221800                                                                           <---------YAB1                                                                         <---------ICU4                                                                      --------->WOX13(1)                                                                <---------ANAC58                                                                <---------ANAC58                                                                --------->ANAC55(2)                                                                <---------ANAC46                                                             <----------DOF2                               ---------->DOF2              ------>ZmHOX2a(2)                            --------->HSFB2a(2)            <------ZmHOX2a(2)      --------->CCA1(2)                            <---------HSFB2a(2)           <---------ARR11(3)  <---------------------WRI1                       <------MYB46(1)                    --------->ARR11(3) ---------->DOF2   --------->ANAC58    <------MYB83                       --------->AGP1 --------->YAB1   --------->ANAC58   --------->MYB59             ---------->DOF2 ----------->HVH21<-------TEIL     - >DOF2            <---------YAB1     --------->AtMYB61    <---------AGP1<---------ATHB12  --------->MYB52(1)   actgtaagaaaccctagcctatgtttggttctacaaagaccaaaactaaaatcaaagatagatctttcgtgacaatcatcaaagattcaaactaagagaa  21221900                        ----------------->AGL1                      <-----------GT1                   --------------->AtSPL8                 <---------AHL20(1)                 --------->AHL20(2)             <---------AHL20(2)            <---------AHL20(2)                               <----------DOF2            <---------AHL20(1) <---------MYB46(3)      --------->ANAC58            --------->AHL20(2)<---------TOE1(2)  <---------ARR11(3)            --------->YAB1  <----------DOF2      --------->ARR11(3) <----------DOF2  *TSS    --------   --------->YAB1<---------AHL20(2)      --------->At4g35610 <---------DAG2    --------->ANAC58  <---------ATHB12<---------AHL20(2)<------MYB46(1)    --------->ANAC46        --------->ANAC58  <<<<<<<<<ARR2  --------->AHL20(1)--------->MYB59     --------->ANAC58        ------>ZmHOX2a(2) -------->WOX13(1)--------->AHL20(2)<------MYB83<---------GLK1(2)<-----------GT1  <---------TOE1(2)<-   aacaatcaaaacaataaaatttatttacctctttggttcggtcatcttcaaaatctccagcaacttttttctttgtctcgatcgcaagtttttaagacct  21222000                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                                                                 ----                                                                                                 <<<<                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ====                                                                                                 <---                                <---------MYB52(2)                                               <---                             <---------WRKY12                                                   -----                     <-------TEIL                                                            --------                    --------->CCA1(2)                                                        ------>NtERF2                    --------->ARR14(1)                             ==================================                   <---------ARR14(2)                      <---------MYB46(3)               ---------                   --------->ARR11(1)                    <---------MYB52(1)              --------->GLK1(2)                   --------->ARR14(2)     ----------->RAV1(1)      <----------DOF2       --------->ARR14(2)                   --------->TOE1(2)    <-------TEIL  --------->SPL7                     <---------ARR14(2)             <---------TOE2(3) --------->At4g35610   <---------MYB52(1)                 <---------ARR14(2)        --------->ATHB12     <---------WRKY38(1)  --------->DEAR3(2)        <-----------RAV1(1)<----- ->ARR11(3) ---------->DOF2<-----------HVH21 ------->GAMYB --------->MYB52(2)           <---------GLK1(2) --------ANAC46  ----------->ARR10---------->DOF2 <------------AtMYB77  <---------YAB1  --------->ARR14(2)   gttgtgttcttgattaaagaagatacgagggtcaactaaagatgcaacagaaaccgtccgtttgtttgacttttatcactgttgcatccagattccgcca  21222100 -----MYC2 -----PIF5 -----MYC3 ---->MYC3 ---->MYC2 ---->PIF5 ---->MYC4 -----MYC4 ------PIF3(3) ----->PIF3(3) <<<<<<HY5 ----->O2 ------O2 ----->TGA1a                                               <---------ANAC46 =====================================bZIP_DOF             <---------HSFB2a(2)                      - ------TGA1a                                              <---------LBD16                           - ------ANAC46                                          <---------HSFC1(2)                           = ->NtERF2                        <---------ANAC46     --------->MYB52(2)                     <------- ->LBD16                   ---------->DOF2            ----------->ARR10                      <------- ======bZIP_DOF       <---------WOX13(1)              --------->MYB111(1)                 ---------->ID1 >ANAC46             <------------CBF           --------->MYB52(1)    <----------DOF2     <---------- ----ALFIN1      <---------MYB52(1) --------->REM1(2)<--------P--------->GLK1(1)         <-----------GT1   cgtggattacttcaaacccgttcgattgatcaagcgcgtgaagacttgagtaagggtagtttcggaaatacactttagaagtttttttttttttcctttt  21222200                                                                         ----------------------->TaNAC69(2)                                                                        ------>ZmHOX2a(2)                                                                      <---------ARR14(3)                                                                      <-----------ARR10                                                                      <---------ARR14(2)                                      ---------->DOF2   --------->AHL20(2)     --------->GLK1(2)      <---------HSFB2a(1)         --------->ANAC58      <---------AHL20(2)    <---------GLK1(2) -------->LBD16                   --------->ANAC58    --------->TOE2(3)<------ZmHOX2a(2) ----->ZmHOX2a(1)               ---------->DOF2   <----------DOF2     --------->AGP1   --------->ICU4 ===============HOX2a_HOX2a--------->ZAT18       ------>ZmHOX2a(2)    --------->ARR14(2) --DAG2          *TSS      <---------ZAT18     <---------ARR11(3)     <---------ARR11(3) ---DOF2 <------ZmHOX2a(2)--------->ALFIN1     --------->ARR11(3)     --------->ARR14(3)         <--- -GT1<---------KAN4(2)  <---------ANAC46   <----------DOF2            --------->ARR11(3)  <---------YAB1   tcctgagaacgatcgaatcgaagacggagtgtgcaaaagccaaagctttgatctttcattaattcttctcaagatcttcagagtctgtaagtatttttgg  21222300                                                                       <---------ANAC58                                                                       <---------ANAC58                                                                      <---------At4g35610                                                 <---------YAB1   <---------HSFB2a(2)                                           <---------MYB46(3)     --------->HSFB2a(2)                                  <---------AHL20(2)             <---------LBD16                                 --------->AHL20(2)              <---------ANAC58         <---------ANAC58        <---------AHL20(2)              <---------ANAC58         <---------ANAC58        <---------AHL20(1)              <---------ANAC46                ----       <-----------GT1           --------->AHL20(1)     <---------At5g28300       ------>ZmHOX2a(2)      <<<<<<<<<<GT-3b    ----------->GT1 <---------At4g35610    <---------LBD16 --------->ARR11(3) ------GLK1(2)       <---------ATHB12    <-------GAMYB <-----------GT1<---------ZAT2  <---------ARR11(3)   aatcttatttttcttgtttctcaatcgatgtaaaataaaattcagttgttgatgattttaccatgtttcgggagcttgtgttgatctagttcttcgctct  21222400                                                                                                  ---                                                                                                 <---                          --------->ZAT14                                                        ----                          <---------ZAT14                                                       -----                          <---------ZAT18                                                       <----                          --------->ZAT18                    <-----------GT1                    <----                       <---------ANAC46                   <----------DOF2                       <----                    ------>ZmHOX2a(1)          --------->ANAC55(2)                  <---------ARR11(3)               ------>ZmHOX2a(2)              <---------TOE2(3)                ------>ZmHOX2a(2)-----             <---------ARR11(3)               <---------TOE2(2)        <---------AHL20(2)   --------- ----->ZAT6  --------->ARR11(3)               <---------TOE1(2)    <----------DOF2<---------MYB52(1)   cactaggctaattttgatcttcctgatgtgcacaatgtgaatgggtcttaggtattagtgatttatcggctttttatttgatccattatctatccaaaga  21222500      <-----------GT1   <---------AHL20(2)   --------->AHL20(2)   <---------ICU4 --->ZmHOX2a(2) ---ZmHOX2a(2) ----->CCA1(2) ---->ARR11(3)                                                     <------MYB46(1) -----ARR11(3)                                      <---------AtMYB61 -----AGP1                                        <---------ANAC58 <------MYB83 -------ARR10          ----------->GT1            <---------ANAC46--------->MYB59              ------ ---->AGP1     <---------At4g35610                <---------ANAC58--------->MYB46(2)          ------- ->DOF2        --------->At4g35610    <----------DOF2----------->GT1            <---------MYB46(3)   tctaattttttctgttttgctgaagttgtaaattggaacccttttgtgaattgtgtggtttttttagtttggtattgcatagtggtttctctgaaactgt  21222600                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                              <------ZmHOX2a(1)                                                                            --------->ANAC58      ------>ZmHOX2a(2)                 <---------ANAC58                    --------->ANAC58     --------->CCA1(2)                  <---------ANAC58                    <---------TOE2(3)     <------ZmHOX2a(2)                  <---------ANAC46                 >>>>>>>>>>GATA-1    --------->ARR14(2)              <---------ANAC55(1)                  >>>>>>>>>>GATA-2    <---------ARR11(3)              <---------ANAC46                     >>>>>>>>>>GATA-4    <---------AGP1                  <---------ANAC58                     >>>>>>>>>>GATA-3    --------->ARR11(3)              <---------ANAC58                    --------->YAB1    --------->AGP1               <---------ATHB12                    --------->YAB1    <---------ARR14(2)     ------>ZmHOX2a(2)            <---------YAB1 <---------YAB1  ----------->ARR10       --------->GLK1(1)     <----------DOF2      <---------ICU4 --->At5g28300           <---------ARR11(3)    <---------ANAC58     --------->ICU4 ---------->DOF2  < ---->GT1                --------->ARR11(3)    <---------ANAC58     <---------ATHB51             <---   gaattagatctgagaatggagtcttgtgatctccaattacttgtgtgatgcttttgttatgcttactcaaattatgataaggaagcaaagttatgttgat  21222700  Previous    Next  AGI:  At5g52200.1    Description:  phosphatase inhibitor/ protein phosphatase inhibitor. similar to unknown [Populus trichocarpa] (GB:ABK94994.1); contains domain PTHR12398:SF5 (PTHR12398:SF5); contains domain PTHR12398 (PTHR12398) Range:  from: 21219865    to: 21221985    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g52210.1    Description:  ATARLB1/ATGB1 (ARABIDOPSIS THALIANA GTP-BINDING PROTEIN 1); GTP binding. similar to ATARFA1B (ADP-RIBOSYLATION FACTOR A1B), GTP binding / phospholipase activator/ protein binding [Arabidopsis thaliana] (TAIR:AT5G14670.1); similar to ATARFA1E (ADP-RIBOSYLATION FACTOR A1E), GTP binding / phospholipase activator/ protein binding [Arabidopsis thaliana] (TAIR:AT3G62290.1); similar to ARF1A1c (ADP-RIBOSYLATION FACTOR 1), GTP binding / phospholipase activator/ protein binding [Arabidopsis thaliana] (TAIR:AT2G47170.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96250.1); contains InterPro domain Ras GTPase; (InterPro:IPR00180 Range:  from: 21222217    to: 21224323    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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