Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                             --------                                                                                             <-------                                                                                           <---------AHL20(2)                                                                                       --------->AHL20(2)                                                                                    --------->YAB1 --            <---------YAB1                                                     <---------ANAC46  <---          --------->YAB1                                                       <---------ANAC58<-----          --------->AHL20(2)        --------->AHL20(2)                         <---------ANAC58------         <---------ATHB12   --------->MYB52(1)     <-----------GT1          <-----------GT1--------->AHL20(2)         <---------ATHB51<---------At4g35610   --------->At5g28300      --------->ICU4<---------YAB1 --------->DOF2    --------->At4g35610        ----------->GT1    ----------->GT1   <---------YAB1----   attaaagtccaattataaatgagctatagctaacaaaaaaaaatgtgatggtaaaaccctacagaaatggtataatttttagcgtatgattatatatata  21208100         --------->AHL20(2)         <---------AHL20(2)       <---------AHL20(2)       --------->AHL20(2)     --------->AHL20(2)     --------->YAB1     <---------AHL20(2)   --------->ARR11(3)   --------->AHL20(2)--------->AHL20(2)   <---------AHL20(2)<---------AHL20(2) <---------AHL20(2)--------->AHL20(2)            --------->ANAC58 --------->AHL20(2)<---------AHL20(2)            --------->AtLEC2 --------AHL20(2)<---------AHL20(2)              --------->ANAC58 ->AHL20(2)--------->AHL20(2)                  <---------ANAC58 --AHL20(2)<---------AHL20(2) <---------YAB1   <---------ANAC46 ------->AHL20(2)--------->AHL20(2)       <---------AtLEC2 ------AHL20(2)--------->AHL20(2)       ------>MYB83                                    ----------->RAV1(1) ----AHL20(2)--------->AHL20(2)         ------>MYB46(1)                        ------>ZmHOX2a(1) --->AHL20(2)<---------AHL20(2)    <-----------GT1          <-----------GT1   --------------->AGL15 ----->AHL20(2)<---------AHL20(2)------->TEIL  <---------ANAC58          <---------At4g35610   tatatatatatatatatatatatatatatatcatgaatcaccttccatggcatgcaaggtttttgctgtttcttcatcttcctgtaattgcaacattttt  21208200                                                                                                    <                                                                                              -------                                                                                           <---------                                                                                          --------->AHL20(2)                                                                                          <---------AHL20(2)                                                                                     <---------ARR11(3)                                                                                     --------->ARR11(3)                                                                               --------->ARR11(3)   <                                                                     --------->YAB1<---------YAB1   -                 <---------AtLEC2                               --------->KAN4(2)--------->YAB1     -         <---------At4g35610                 <---------ICU4   <---------YAB1   <---------ARR11(3)----    --------->YAB1                      --------->AHL20(2) <---------YAB1     --------->RVE1(1)  ----  <---------ARR11(3)            ----------->GT1          <---------At4g35610  --------->CCA1(1) <----   gcataatcttcatcagcttgtatggacatcgcttctgttaaaaaaaatcaatacaatacagatgattatactcatgaaaaatatcatgatatttaactat  21208300     --------->AHL20(2)     <---------AHL20(2)     <---------AHL20(1)     --------->AHL20(1)  --------->YAB1 <---------AHL20(2) <---------YAB1 ---------AHL20(2)            <---------ICU4                               <-----------GT1 -->YAB1                      <--------HAHB4                             --------->CCA1(2) --GT1   --------->AHL20(2)   --------->YAB1                             <---------GLK1(1) ---------AHL20(1)           --------->ICU4                             --------->ARR14(2) -------->AHL20(1)           <---------YAB1                             <---------ARR14(2) -------->AHL20(2)  --------->DAG2        --------->YAB1            <-------MYC3                    < ----->YAB1        ---------->DOF2<---------AHL20(2)                ------->MYC3                  --- ----->AHL20(2)<---------AHL20(2)--------->AHL20(2)               <-------MYC3                  <---- -----YAB1<---------AHL20(2) <---------ATHB12                     ------->MYC3<----------DOF2<-------   aatataataaattttatataaaaaaggagtaatcattttataaaacataattcatacaacaattaacacatgtggatatacttttcagaaactatgtaat  21208400                                                     ----------->GT1                                                     <------MYB46(1)                                                     <------MYB83                                                     <---------ANAC55(2)                                                     <---------ANAC46                                                    --------->MYB52(2)                                                    --------->MYB46(2)          <---------MYB52(1)                        --------->MYB59     --------->TOE2(3)                              --------->MYB111(1)  <<<<<<<<<GT-1                                    <---------MYB55(1)      --------->GLK1(2)  <-----------GT1                                 <---------MYB52(1)       <-----------ARR10 ---------WOX13(1)                         <---------MYB52(1)              <---------ARR14(2) <------ ------>ATHB12                            <-------GAMYB                   <---------CCA1(2) --------- -----WOX13(1)                           <---------MYB46(3)   --------->YAB1             <---------ANAC58 --AHL20(2)            <---------YAB1    ----------->GT1     <---------ATHB12            <---------ANAC58   tgatttaccttcgttttgtttgattttcaatgcgatatactggtcgttaatcgttaggtataaatcatcaaactgcaaatctaatgcaattgcttcatca  21208500      <---------YAB1                                                     <---------GLK1(2)      ------>ZmHOX2a(1)                        ----------->HVH21         <------------CBF     ------>ZmHOX2a(2) ---YAB1                                  --------->HSFB2a(2)    ------>ZmHOX2a(2)   <---------ARR11(3) >REM1(1)                              <----------DOF2    --------->MYB52(1)         --------->ARR11(3)   atggcatcctgatttagagattgagacattggttttgatgacttttagaatgacagaggctaactgatcgagagagattgtccccaagataatcgatctc  21208600                                     <---------ATHB12                                 --------->AHL20(2)                               --------->TOE2(3)------------>CBF                  --------->ARR11(3)                             <-------TEIL       --------->LBD16                   <---------ARR11(3)                        --------->AHL20(2)     --------->ANAC46              <-----------GT1<--------                        ----------->TBP--------->WOX13(1)             --------->ARR11(3)    <--------                       --------->AHL20(1)      --------->ANAC58       <-----------ARR10    --------->AHL20(2)                       <---------AHL20(1)      --------->ANAC58       <---------ARR11(3) --------->YAB1                       <---------ARR11(3)      --------->RAP2.6(2)    --------->GLK1(2)--------->AHL20(2)                  ------------>CBF<---------AHL20(2)              --------->YAB1 <---------CCA1(2)<--   taatctctatgcatatgttatccaatatatatacattaaatcattcaaaccgcaatatttctcatttatcaaaatctattcacaaatcttttaataaata  21208700                 <---------AHL20(2)                <---------MYB52(1)                                                 <---------ICU4               --------->At5g28300                                            ------------>CBF               <-------GAMYB                                                >>>>>>>>>>WRKY26              ----------->GT1                                          --------->DAG2     --------->GLK1(1)                                                ---------->DOF2       <--------     <---------GLK1(1)                                             ------>ZmHOX2a(1)        --------- -ICU4      <<<<<<<GRF7                                          ------>ZmHOX2a(2) --------->YAB1   - -AHL20(2)------>ZmHOX2a(1)                                    --------->ARR11(3) --------->ICU4    < -----TEIL----------->HVH21   ----------->GT1                  <---------ARR11(3) <---------ATHB12  -   tacatagatttcctgacagttaatttagtatatagtgattttaaaaggttttagtttttttgtatgatcctataaagttgatcaatgatcacagttgtta  21208800                                                                                    <---------------AGL15                                                                        --------->AHL20(2)                                                                       <---------AHL20(2)            <------------CBF                                           --------->AHL20(2)          <---------ARR11(3)                                        <---------AHL20(2)          <---------ARR14(2)                                       --------->AHL20(2)<----------DOF2 -MYB46(3)--------->ARR11(3)               ------->MYC3        <---------AHL20(1)   ================= -->GT1   --------->ARR14(2)               <-------MYC3     --------->AHL20(2)      --------------->AGL15 -------->AHL20(1)         <---------AHL20(2)           --------->AHL20(2)         ----------------->AGL2 ---------AHL20(2)        --------->AHL20(2)           --------->AHL20(2)   <-----------GT1      ---- -------->AHL20(2)        <---------AHL20(2) <-----------HVH21 --------->AHL20(1)  ----------------->AGL1   aataaaatgacagatattgattttagaattaaatagattacaacacatgtcaaaccattaaaaaaaatattaaataaataactataccttttagagaaat  21208900                                                                                               ------                                                                                      <--------------                                                                                ----------->GT1------                                                                               <---------TOE1(3)                                                                         --------------->AGL15 ------                                                                         <---------------AGL15 <-----                                                                        =============================                                                                        <-----------------AGL2 <-----                                                                        <-----------------AGL3-------                            ----------->GT1          <---------AHL20(2) ----------------->AGL3<------                           <---------TOE1(3)        --------->YAB1--------->AHL20(2)--------->MYB52(2)                           <---------TOE2(3)<---------YAB1      --------->AHL20(2)<--------P  <------              --------->MYB52(1)          --------->YAB1   ----------->GT1     <---------TOE2(3) ========================================================================================MADS_MADS ----->YAB1 <---------MYB52(2)   <---------YAB1   --------->AHL20(2)  <-----------GT1 ---------------   aatagcattttagaactaacaaaacaattaaggttataaatgtattatgacatataatattgggaaaataatatactatataaggttagtagtacaatta  21209000  Previous    Next  AGI:  At5g52150.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G52140.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ65620.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 21207214    to: 21208529    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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