Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          --------->AHL20(2)                                                                      <----------DOF2     <---------ZAT6                                                   <---------------AGL15   ----------->GT1                                                    --------------->AGL15 ---------ZAT2             ------>ZmHOX2a(2)                         <-----------------AGL3 ---------At4g35610       --------->GLK1(1)                    <-------TEIL                ---------- ----->TEIL    ---------->DOF2          --------->AHL20(2)---------->DOF2    ----------->GT1   gcagctagtgataaacccaaagcctctgatctctatcaccaaaaaattcacaaaaaatgctaaagttcatagctttaaatagcaaaaacactgtgaagcg  21190800                                                                                        <------ZmHOX2a(2)                                                                                       --------->ARR14(2)                                                                                       <---------ARR14(2)                                                                                  --------->ARR14(2)                                                                                  --------->SPL7                                                                                  <---------ARR14(2)                                                    <---------MYB46(3)            ------->TEIL                                          <---------At4g35610                   <---------SPL7                                          --------->ZAT2                       --------->RAP2.6(2)                                          --------->At4g35610                  <---------ANAC58             <---------YAB1              --------->GLK1(2)                     <---------ANAC58           <-----------GT1          <---------At4g35610                       --------------->AtSPL8    <-----------GT1            <---------WOX13(1)   ----------->GT1       ---------->DOF2 ----------->GT1             --------->ATHB12      --------->ALFIN1     ------>ZmHOX2a(2) >DOF2  <---------ICU4  <-------TEIL--------->At4g35610       >>>>>>>>>TBF1   --------------->AtSPL3   aaattgttactaattaccatttgagattcactgattggagcagaagctgagaagtggttaagaagaagaagtgatccaaagccgtacccgatccatctcg  21190900                   --------->LBD16                  <---------LBD16                 --------->TOE1(2)                             <---------HSFC1(1)          <-----------HVH21                                    --------->HSFB2a(2)        <-------TEIL   --------->GLK1(1)                       --------->HSFC1(1)      <---------ARR14(2)          --------->ANAC58         <----------DOF2        --------->GLK1(2)      <---------GLK1(2)<---------GLK1(1)                --------->ARR11(3)        <---------ARR11(3)      --------->ARR14(2)          --------->ANAC58      <---------ARR11(1)  ----------->GT1      ----      --------->ARR11(1)    ------>ZmHOX2a(1)          <---------CCA1(2)   ----------->GT1<----------DOF2    ----------->ARR10<------ZmHOX2a(1)        <---------ATHB12 <---------HSFB2a(2)<-----------ARR10   gtagataagattcgtcaaacccaggaattcctacagacgcagacacaaatcaatttcaaatctttctcgaaaatagttgggaaaaatctgagctttgaag  21191000                                                                                                    -                                                                                                   --                                                                                                   --                                                                                                   <-                                                                       <---------ANAC46            <-                                                                   >>>>>>>>>ARR2                  ---                                                                 <---------YAB1                   ---                                                               <----------DOF2                    <--                   --------->DAG2                        --------->At4g35610                      <--       ----------->GT1 ---------->DOF2                   <---------At4g35610 --------->GLK1(2)   ---- ----->ALFIN1     ---------->DOF2               <---------MYB46(3)--------->ATHB12     <---------SPL7   tggggaaggaagaaaataccaaaagtgaagcgaagaacagagagattgagttgttgatcagatgtctttgattgtggagaatcgttctctgtacgagcga  21191100            <----------DOF2        <---------WRKY18(1)       --------->WRKY12       --------->WRKY38(1)  <---------ANAC58  <---------ANAC58  <---------ANAC46 <-------TEIL -------->CCA1(2) ------->ARR11(1) ------->ARR14(2) --------GLK1(2) --------ARR14(2) ------>HSFC1(2)                                                                          <---------At4g35610 ------>HSFB2a(1)              <---------ANAC46    ----------->GT1                        --------->At4g35610 -------HSFC1(2)          <---------REM1(1)       ----------->GT1                     <-----------HVH21 -------HSFB2a(1)   <------NtERF2         <------ZmHOX2a(1)                          <----------DOF2 ------->ARR10     ------>NtERF2        <---------TOE2(3)<-----------GT1   <---------CCA1(2)   agattcgtgttgacctttgggcgcgaggttgtagcgcgaatttaggatggaacgggaaattacaaatttgaatactcatctctctctctttcagatgtct  21191200                                <---------GLK1(1)                               *TSS                              --------->ATHB12                              <---------ICU4       --------->At4g35610                            <---------TOE2(3)      <---------ZAT14                           --------->YAB1          --------->ZAT2                     --------->LBD16               <---------ZAT2                     ------>NtERF2                 --------->ZAT14                    --------->ANAC58               <---------At4g35610                          <----                    --------->ANAC58      <---------ARR14(2)                                 <-------                    --------->ANAC46<---------HSFC1(1)                                   <---------MYB46(3)                   --------->MYB46(3)     --------->ARR14(2)                         <-----------RAV1(2)                 --------->ARR14(2) <---------HSFB2a(2)                           -------------------                 ------->TEIL<---------YAB1------->TEIL              ----------------->AGL2--------->DOF5.7(2)                 <---------ARR14(2) --------->HSFB2a(2)       --------->CCA1(2)  --------->ANAC58                <---------CCA1(2)   --------->HSFC1(1)     <---------YAB1        --------->ANAC58   -   tcgagtcgaatagtttctgtatccgccattgatgatttctcgaagaacctctctgctcagtaagatagaggcccattaagagcaggcccagttgttaacg  21191300          ----------->GT1          <---------TOE2(3)     <--------HAHB4     --------->AHL20(2)     -------->ATHB1     --------->YAB1                                                                  <-----------GT1     --------->ATHB51                                                            <---------AHL20(2)     <---------ICU4                                                              --------->AHL20(2)    <---------ATHB51                                                            <---------AHL20(1)    <---------ATHB12                                                            <---------AHL20(2)    --------->ICU4                   <----------DOF2                            --------->AHL20(1) -------TGA1                      <-----------GT1                               --------->AHL20(2) --DOF5.7(2) <---------AHL20(2)----------->GT1                              <---------AHL20(2) ---->TaNAC69(2)             <------------CBF                             --------->ANAC55(2)    <--- ----------->CBF       >>>>>>>>>>MYB80     <-----------GT1             <---------AHL20(2) --------->MYB52(1)   tctccaattattaagttaattttcaaaccaaaattgttacttttgtaactgattttgaaaatttcacaaacattttatgtaatttatttacaaaacggga  21191400              <---------ALFIN1            ------>NtERF2                                                                          <-            --------->LBD16                                                                  <-------           --------->ANAC58                                                                  --------           --------->ANAC58                                           --------->ICU4       --------->YAB1           --------->ANAC46                                 --------->ANAC46         <---------TOE2(3)          <---------LBD16           <---------TOE2(3)      --------->LBD16        --------->ICU4   <-       <-----------GT1      <---------ANAC46              <---------HSFB2a(2)<---------TOE2(3) ------ ------WOX13(1)       <---------TOE2(3)    ---------->DOF2--------------->AGL15   <---------ATHB51---   ttgctaaattttcccgccatctctaatgttttgtgtttaagaaatcaaagttcaatagttccacaaaatgcaatgttttaagaaattatggaatcatgta  21191500                     <--------HAHB4         --------->GLK1(2)         <---------ARR14(2)         --------->ARR14(2)     --------->HSFB2a(2)                       ------->TEIL     <---------HSFB2a(2)--------->ATHB51    <---------ANAC55(2)     --------->HSFC1(1)<---------YAB1       <---------YAB1                                        --- --------ICU4        --------->YAB1         <---------ANAC46     --------->TOE1(2)              <---- --ANAC55(2)--------->HSFB2a(2)          --------->ICU4 ----------->GT1                    <------ZmHOX2a(1) --->GT1<---------GLK1(2)              --------->YAB1  --------->DAG2                     <---------YAB1 --------AHL20(2)   <---------YAB1     <---------ICU4  <---------TOE2(3)                 <---------TOE1(2) --->AHL20(2)  <<<<<<<ZML2         --------->ZAT6    ---------->DOF2     ----------->GT1 <---------TOE2(3) ------>ICU4<---------HSFB2a(2)  <-----------GT1  <---------AHL20(2)   <---------YAB1    <---------TOE2(2)   aatatttcgagaatctagaactattattattgtttttacactaattatgtatataaaaaggttagaacatatgatgagaaaaaatgtttcttaggatagg  21191600                                                                                                   xx                                                                                                   xx                                                                                                   xx                                                                                                  <xx                                                                                                 <xxx                                                                                                <xxxx                                                                                                <----                                                                                                -----                                                                                              <xxxxxx                                                                                             <xxxxxxx                                                                                             <xxxxxxx                                                                                            xxxxxxxxx                                                                                           <xxxxxxxxx                                                                                           --------->bZIP60(2)                                                                                           xxxxxxxxxx                                                                                           <xxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                          <xxxxxxxxxx                                                                                         <xxxxxxxxxxx                                                                                         <xxxxxxxxxxx                                                                                         <xxxxxxxxxxx                                                                                         <xxxxxxxxxxx                                                                                        <xxxxxxxxxxxx                                                                                        <xxxxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                      xxxxxxxxxxxxxxx                                                                                     <xxxxxxxxxxxxxxx                                                                                    <xxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                    <xxxxxxxxxxxxxxxx                                                                                    <xxxxxxxxxxxxxxxx                                                                                    <xxxxxxxxxxxxxxxx                                                                                    <xxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxx>smallRNA(i)                                                                                    <xxxxxxxxxxxxxxxsmallRNA(le3)                                                                                   <xxxxxxxxxxxxxxxxx                                                                                   <xxxxxxxxxxxxxxxxx                                                                                   <xxxxxxxxxxxxxxxxx                                                                                   <xxxxxxxxxxxxxxxxx                                                                                   xxxxxxxxxxxxxxxxxx                                                                                   <xxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                  xxxxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                  xxxxxxxxxxxxxxxxxxx                                                                                  xxxxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                  xxxxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                                 <---------ALFIN1<xxx                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                                 <xxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                               --------->ANAC46<xxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxx                                                                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                              xxxxxxxxxxxxxxxxxxxxxxx                                                                              <xxxxxxxxxxxxxxxxxxxxxx                                                                              <xxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                              <xxxxxxxxxxxxxxxxxxxxxx                                                                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                              <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                              <xxxxxxxxxxxxxxxxxxxxxx                                                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                              <xxxxxxxxxxxxxxxxxxxxxx                                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                             <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                             <xxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                            <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                           <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                         <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                        <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                       --------->ZAT6<xxxxxxxxxxxxxxx                                                                      <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                   --------->DOF5.7(2)----------->HVH21                       <------MYB83                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                       <------MYB46(1)                            ----------------------->TaNAC69(2)<         <---------ALFIN1                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxx ------>CCA1(2) ------->TEIL                               ---------->DOF2<xxxxxxxxxxxxxxxxsmallRNA(s) --ZmHOX2a(1)   --------->GLK1(2) <----------DOF2--------->YAB1  ----------->GT1<xxxxxxxxxxxxxxxxxxxx   atatatgatcaacacatgaatctgtaggttgtaagactttttttttataaatcatatatatgaaaggaggttaactctctcccacaacttgacacatcag  21191700  Previous    Next  AGI:  At5g52110.1    Description:  HCF208 (HIGH CHLOROPHYLL FLUORESCENCE 208). similar to unnamed protein product [Vitis vinifera] (GB:CAO70397.1) Range:  from: 21189647    to: 21191231    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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