Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <----------DOF2                 <---------YAB1               --------->YAB1               -------->HAHB4               --------->ATHB12               <---------ICU4              <---------ATHB12              <---------YAB1           <---------AHL20(2)       <---------AHL20(2)       --------->AHL20(2)       --------->AHL20(1)                                                                --------->AHL20(1)       <---------AHL20(1)                                                                <---------AHL20(1)      --------->AHL20(2)                                                               <---------AHL20(1)      <---------AHL20(2)                                                 <---------AHL20(2)        <x --------->GT1--------->ICU4                   ----------->GT1           --------->AHL20(2) <-------- ------YAB1--------->AHL20(2)       ----------->GT1                   --------->YAB1   <---------AHL20(2) -->ICU4  <---------AHL20(2)       ----------->GT1                 ----------->GT1  --------->AHL20(2) ---AHL20(2) <---------TOE2(3)    --------->DAG2                  <---------HSFB2a(2) --------->YAB1- ---YAB1  --------->AHL20(2)     ---------->DOF2                  --------->HSFB2a(2)<---------AHL20(2)   ttagtaaaataaattaatgattatacttttgaataaaaagttaaaaatgtggtatttcaacatagtttctagtaataaaactcttatataatattttttt  21178100           <---------AHL20(2)          <---------AHL20(2)        --------->YAB1   --------->MYB46(3)                  --------->HSFB2a(2)                                          < xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <---------HSFB2a(2) --------->YAB1              <---------ICU4 -AHL20(2)--------->AHL20(2)  <-----------GT1              --------->AHL20(2)          --------->ATHB51 -------->ETT(2)       --------->TOE2(3)           <---------CCA1(2)                --------->YAB1  -   tgtcaaccgatattaattagataaatctcaaaaaaccatttctaaaaaaactcttatctaataatatttgtttgtttgaatttttagaataatttcaatt  21178200               --------->ATHB12               <---------ICU4                                                  --------->DAG2               -------->ATHB1                                                 ---------->DOF2               --------->YAB1                                               --------->YAB1              <---------ATHB12                                              --------->AHL20(2)              --------->ICU4                                                <---------AHL20(2)              <---------YAB1                                             --------->YAB1            --------->WOX13(1)                                          <---------AHL20(2)            --------->YAB1                                              <---------YAB1         --------->TOE2(3)                                             <---------AHL20(1)       <---------AHL20(1)                                              --------->AHL20(1)       <---------ARR11(3)                                             --------->YAB1                -       --------->AHL20(1)                                         --------->AHL20(2)                -       --------->AHL20(2)  --------->YAB1                         <---------AHL20(2)   --------->ICU4 ---------HSFB2a(2)       <---------YAB1               --------->AtLEC2--------->AHL20(2)   <-------- -------->HSFB2a(2)     --------->YAB1           ------->TEIL --------->AHL20(2)----------->GT1     -   ttccagcaaaatattaatcattgaatttataatacaatgtaatcgaaaatgaatttcatccaaactaaataaatataataaaaagtaaaatgattttttt  21178300                                                                                 --------->ARR14(2)                                                                              --------->ANAC58                                                                              --------->ANAC58                                                                             --------->SPL7          <-------GAMYB                              --------->DEAR3(1)      --------->SPL1(2)      <----------DOF2                               <------NtERF2           --------->SPL1(1)    --------->ZAT2                                 ------>NtERF2            <---------SPL1(1)    <---------At4g35610                        --------->TGA1a             <---------SPL7    --------->At4g35610                        <---------O2              <---------------AtSPL3    <---------ZAT2                             --------->O2              --------------->AtSPL3   ------->TEIL                                <---------TGA1a          <------------------SPL14 -------->ANAC58               <-----------GT1 --------->ANAC46        --------->PCF5 -------->ANAC46              <---------YAB1 <-----------GT1           --------->PCF2--------->AHL20(2) -AHL20(2)===============================================MYC_MYB--------->ATHB12 <---------ARR14(2) -------->ANAC58         ----------->GT1<---------YAB1     <---------ALFIN1<---------SPL1(2)   gaacgcagctttcgttgtaaaacaagaatgttattacaacttattattcacgtcgccatccccacatgatttgggcccgtacggattttaaatctagccc  21178400                                                             <-------MYC2                                                             ------->MYC3                                                             ------->MYC4                                                             -------->ABF1                                                     --------->bZIP60(1)                                             --------->At4g35610                                      <---------bZIP60(2)    <-------MYC4                          <---------MYB46(2) <------NtERF2   ------->MYC2                          --------->AtMYB61  <---------At4g35610                          <---------MYB111(2)<---------ZAT2  <-------MYC3                          <---------MYB111(1)--------->ZAT2 <---------ANAC55(2)                       <---------ALFIN1     <<<<<<<<<AtERF-4--------->ANAC55(2)                    --------->ZAT6    <---------ANAC58      --------->O2                    --------->ANAC46  <---------ANAC58      <---------TGA1a               --------->TOE2(3)      <---------O2   <---------bZIP60(1)            <---------GLK1(2)        <---------TOE2(3)      <---------O2             --------->SPL7        <---------At4g35610         <-----------GT1<------ZmHOX2a(1)       <---------TOE2(3)        --------->At4g35610 ------>MYB83--------->ALFIN1    --------->TGA1a<---------TOE1(3)        ----------->RAV1(2) ------>MYB46(1) <<<<<<<<<AtERF-3--------->ANAC46        <-----------GT1   aatagaagtcatctgattcttaacaccacctactcatttaacgtggcagctcaggacatcacacgtgtcttcaaattagggttttcttacgaccccttcc  21178500                      xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      <---------ARR14(2)                      --------->GLK1(2)                  <------NtERF2                 --------->ABI4(1)                 --------->ORA47(1)                 ------>NtERF2                --------->RRTF1(2)                --------->RRTF1(3)                --------->RAP2.3(3)                --------->RAP2.3(2)                --------->RAP2.6(2)                --------->DREB2C(2)                <---------ATERF1(2)                --------->DEAR3(1)                --------->ATERF1(2)               --------->RRTF1(1)               --------->ERF1               --------->ORA47(2)               --------->DEAR4(2)               --------->RAP2.6(1)               --------->RAP2.3(1)               <------NtERF2               --------->ATERF1(1)              <---------DEAR4(2)              <---------RAP2.3(1)              --------->At4g35610              --------->ABI4(1)              <---------DREB2C(1)              <---------At4g35610              <---------ATERF1(1)              ------>NtERF2             --------->RAP2.6(2)             --------->RAP2.3(2)             --------->ATERF1(2)             <---------ATERF1(2)             --------->RRTF1(2)             --------->DEAR3(1)             <---------ALFIN1             <---------DEAR3(1)             --------->RAP2.3(3)             --------->RRTF1(3)             --------->ANAC46            <------NtERF2            --------->RRTF1(1)            --------->ATERF1(1)                  ============================HOX2a_HOX2a            --------->DEAR4(2)                   ------>ZmHOX2a(2)            --------->ERF1                      <------ZmHOX2a(2)            --------->RAP2.3(1)                 =============================HOX2a_HOX2a            --------->RAP2.6(1)                 --------->CCA1(2)            --------->ORA47(2)                 --------->ARR11(3)           ------>NtERF2                       <---------AGP1           --------->At4g35610                 --------->AGP1           --------->DREB2C(1)                 --------->ARR14(2)           <---------RAP2.3(1)                 <---------ARR11(3)           <---------DEAR4(2)                  <---------ARR14(2)           <---------DREB2C(1)                <---------CCA1(2)                              <-------           <---------ATERF1(1)        <---------ANAC46                                <--------------          --------->ANAC46            <---------ANAC58                               <---------DAG2          --------->RAP2.3(2)         <---------ANAC58                      <---------MYB52(1)          --------->RAP2.6(2)         <---------O2                         --------->ANAC55(2)     --          <---------DEAR3(1)          <---------bZIP60(2)                  <---------ANAC55(2)    <--          --------->DEAR3(1)         *TSS   <---------HSFB2a(2)        <-----------HVH21    <--------         --------->RAP2.3(1)       ----------->TGA1                   ------>ZmHOX2a(1)  ---------->ID1     ---------->DOF2  --------->ARR14(2)    --------->HSFB2a(2)--------->ZAT14       <----------DOF2  --------->TOE2(3)------------>CBF----------->HVH21          --------->ALFIN1    <-----------GT1<---   catacattaaagccgccgccgcccaatctgtttctctgtgacgtttccagatctgaagcttgaagtggagtcctatcaggtatttcactttttctctttt  21178600       <---------ANAC58       <---------ANAC58  <----------DOF2  ------>ZmHOX2a(1) ---DOF2  <-------GAMYB                                     --------->GLK1(1)                      xx ----------ANAC81   <---------YAB1            <----------DOF2                                <------- -------->ID1    <---------YAB1  <---------ANAC46           --------->ARR14(2)               -------- ---------GT1    --------->ICU4  <---------ANAC58           <---------GLK1(1)            <---------HSFB2a(2) ----------------ANAC81          <---------ANAC58    --------->DAG2             --------->CCA1(2) xxx --------GT1  <---------YAB1   <---------ANAC46     ---------->DOF2      <----------DOF2 --------->HSFB2a(2)   tatccttttgctcgttgtgattatggtcgagttttgtgtgagaaacgtcttttgaaaagcagaattctcaaacagctttgggatatagtttttggaactc  21178700                                                    ------>ZmHOX2a(2)                                                   <---------At4g35610                                            xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                           --------->ARR11(3)    <---------AHL20(2)                     <---------ARR11(3) xxxxxxxxxxxxxxxxxxx>smallRNA(le3)  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --GLK1(1)                          xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ->GLK1(1)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                    <----------DOF2<-- xxxxxxxxxxxxxxxxxxx>smallRNA(le3)  xxxxxxxxxxxxxxxxxx>smallRNA(se3)     ----------->GT1<-----------GT1   caagttttaatttaagcctaattttgaagatgaattgtcagtataaatctttgatctgatactctattagttagtatgtgaatttctttttaacaatttt  21178800                                                                 <---------GLK1(2)                                                              <---------MYB59                                                             ----------->RAV1(2)                                                             --------->ANAC55(2)         xxxxxxxxxxxx                                   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              --------->ARR11(3)                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           <---------ARR14(2)                             <----------ID1                 -------->P        ----------->GT1                       --------->ICU4                      <-----------GT1   --------->DAG2                      --------->ANAC55(2)                --------->YAB1<---------------AGL15                      <---------ANAC55(2)           <xxxxxxxxxxxxxxxxsmallRNA(s)   <---------ARR11(3)                     --------->YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    ---------->DOF2       <--    --------->TOE1(2)<---------ICU4xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  --------------->AGL15      <-- -------YAB1        <---------ATHB12          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------CCA1(2)   cttattcatgcgagagctatcaataagtattagaacaaagttttatactgacaattcaatcttacctgattttcaaaaaaaagtatatcttgaaattttg  21178900                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                     <------MYB46(1)                                     <------MYB83                                     <---------ANAC55(1)                                     <---------ANAC55(2)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           --------->GLK1(2)           <----------DOF2           <---------ANAC46      <---------GLK1(2)  <---------ANAC46                   --------->ANAC55(2)--------->YAB1 xxxxxxxxxxx>smallRNA(se3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) -------ANAC58                xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -------ANAC58          <---------STY1(2)          <---------YAB1   --------->ATHB12               <x   tcttgggtagagtctttgattttgctagatagtagcattaggtgttagatgtttttattcagaatttgaatgtttgctatgaactatctagattaatcta  21179000  Previous    Next  AGI:  At5g52070.1    Description:  agenet domain-containing protein. similar to agenet domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G42670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71318.1); contains InterPro domain Tudor-like, plant (InterPro:IPR014002); contains InterPro domain Agenet; (InterPro:IPR008395) Range:  from: 21178537    to: 21182251    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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