Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <---------YAB1                                                                      <---------YAB1                                                                   <---------YAB1                                                                --------->AHL20(2)                                                                <---------AHL20(2)       <---------ANAC55(2)                                   --------->ARR11(3)       --------->ANAC55(2)           --------->YAB1          --------->AHL20(1)      <-------TEIL                --------->YAB1             <---------ARR11(3)  <---------ZAT6             <---------ANAC58                <---------AHL20(1)                    <- ---------->GT1              <---------ANAC58                --------->AHL20(2)               <------ -------ZAT14               <-------TEIL                     <---------AHL20(2)           --------->ARR11(3) ------>ZAT14             --------->TOE2(2)<-------TEIL     --------->AHL20(2)            <---------GLK1(2) -->YAB1    --------->CCA1(2)<---------ANAC46  --------->ATHB12 <---------YAB1            <---------ARR11(3)   tatagtgatacatgatataagtatataacatgcgtataatcaacatacatgatttagacaaaatatattattattctaatttttgtcatatagattttga  21155700                                                                                        <---------At4g35610                                                                                       <---------TOE2(3)                         --------->ANAC58                                      <---------YAB1                         ----------->GT1                  --------->YAB1       --------->ICU4                --------->ARR11(3)                      --------->AHL20(2)   <---------ICU4           ----------->GT1                         ----------->GT1          --------->ICU4 ----------GT1  --------->AHL20(1)            ---------->DOF2 <-----------GT1--------->YAB1 ---YAB1<-----------GT1  --------->ANAC58   <---------------AGL15           <---------ATHB12   ttcacattataaactgtatatattgacaagaaaaaaaaaacatttgacaaaagaagaaaataataaacattttttgaaatcatgattttgaggtgatagt  21155800                 --------->YAB1                 -------->HAHB4                <---------YAB1                <---------ATHB12               <---------TOE2(3)                                        --------->ARR14(2)              <---------ICU4                                            <---------ARR14(2)     <-----              --------->YAB1                                          --------->REM1(2) ----------->GT1           --------->YAB1                                 <---------ANAC46        <-----------GT1          --------->ZAT6   <-----------HVH21  --------->ARR11(3)   <---------ANAC46 --------->ZAT6   ctatttatactaatactaatgatactatgtgtcaatgcatcactaatacatcttcagattgagtagaaaccgtgtatatggatttaactctagttaaaca  21155900                                                                   ------>MYB83  --------->AHL20(1) -                                                                   ------>MYB46(1)    <---------AHL20(2)                                <-----------GT1         <-------TEIL            --------->YAB1      -                           <---------ANAC58        --------->AHL20(1)        --------->YAB1     -----                           <---------ANAC58        <---------AHL20(2)      --------->AHL20(2)   <----                           <---------ANAC46        --------->AHL20(2) ----------->GT1 --------->AHL20(2) -----ID1         ----------->GT1           ----------->GT1      <---------MYB59--------->AHL20(2)  -   acaagaacatacaaatttgaatgtaataagcgtgtaaccatttgacttgaaaataaaatacatatgaccaaattgaaaataataatattaaaatccagtg  21156000          --------->AHL20(2)        --------->AHL20(2)        --------->AHL20(1)       --------->YAB1                                                                              <<     --------->AHL20(2)                                                                     <-------- ------->GAMYB            --------->AHL20(2)           <----------ID1                       <-------- -------->ANAC58          ---------->DOF2         ----------->TBP         <---------ATHB12  <-------- ---------->GT1      ------------>CBF     <----------DOF2                ------>MYB46(1)    --------- ---->ZAT14    ----------->GT1     <---------ATHB12  ---------->DOF2     ------>MYB83   *TSS--------- -----ZAT14   ----------->GT1    ------>MYB83   <---------------AGL15 ------------>CBF  ------>MYB46(1) -------->ANAC58<<<<<<<<<MYB98   ------>MYB46(1)--------------->AGL15 --------->MYB46(3)------>MYB83   caacgaaaaaaataatatgttaaaacaataaaacccactcactactttctctatataaagccaaatgcttcaaccaatcttcttcacacctacaaatctt  21156100      xxxxxxxxxxxxxxxx>smallRNA(i)--------->ARR14(2) <<<<<<<TBF1                      <---------ARR14(2)                     <-----------HVH21 -ARR11(3)                        --------->ARR11(3)                  <---------ANAC58          <---- -ARR14(2)                        <---------ARR11(3)                  <---------ANAC58         ------ ---ARR10                 ----------->HVH21                     <---------ATHB12               ------ >ARR14(2)               <-----------HVH21                    --------->WOX13(1)        <-------TEIL >ARR11(3)            ------>ZmHOX2a(1)           ---------->DOF2--------->YAB1        <-----------GT1   cttcttctctctctctccctcttcctctgtcacacagatattgacaaaaacaaaaagaatgagtcaatcaaatcgtgtcagagacgaagttacattacct  21156200                                                                 --------->TOE2(3)                                                                 --------->YAB1                                                           --------->ANAC58                                                           --------->ANAC58        <-----------GT1          ------>ZmHOX2a(1)  --------------->AGL15      --------->RVE1(1) ------DOF2                <-----------GT1          ------>ZmHOX2a(1)         --------->ARR11(3) --->TOE2(3)     <---------At4g35610                <---------------AGL15     <---------ARR11(3) --->TOE1(3)     --------->At4g35610--------->ZAT14--------->TOE2(3)          --------->GLK1(2)  ----   ttactccaaaaaacctctcatctgaaaaatcactcctctgttctctctgttttcctaaatgaagcaatctcaatctgcaaaatctcttacccattggtcc  21156300                                                                                           --------->RAP2.3(3)                                                                                           --------->RAP2.3(2)                                                                                           --------->DEAR3(1)                                                                                           --------->RRTF1(2)                                                                                           --------->RAP2.6(2)                                                                                          --------->RRTF1(1)                                                                                          --------->ATERF1(1)                                                                                          <------NtERF2                                                                                          --------->DEAR4(2)                                                                                         ------>NtERF2                                                                                         <---------ATERF1(1)                                                                                         --------->ABI4(1)                                                                                        --------->RAP2.3(2)                                                                                        <---------DEAR3(1)                                                                                        --------->RAP2.3(3)                                                                                        <---------ATERF1(2)                                                                                        --------->ANAC46                                                                                        --------->ATERF1(2)                                                                                        --------->DEAR3(1)                                                                                       --------->ERF1                                                                                       --------->ATERF1(1)                                                                             <---------ATERF1(1)                                                                            --------->ALFIN1------>NtERF2                                                                            <---------DEAR3(1)                                                             <---------bZIP60(1)       --------->DEAR4(2)                                                             --------->bZIP60(1)       --------->RAP2.3(1)                                                             --------->ANAC58--------->ABI4(2)                                                             --------->ANAC46------>NtERF2--------->RAP2.3(1)                                                             <---------TGA2(1) <---------PCF2                                                             --------->TGA2(1)<------NtERF2--------->RRTF1(3)                                                             --------->ANAC58<---------MYB46(3)                                                           <---------ATERF1(1)--------->ATERF1(1)                                                          ----------->TGA1<---------DEAR3(2)<------NtERF2                                                          ----------->HVH21--------->ATERF1(1)                              <---------CCA1(2)   <---------MYB46(3)     <---------DEAR3(1)----------                          ------>ZmHOX2a(1)       --------->ABI4(2)      <---------ATERF1(2)---------                    --------->MYB52(2)           <---------AtMYB61<---------ALFIN1    <---------ATERF1(1)                   <-------TEIL               <---------DEAR3(1)<---------ALFIN1     --------->ANAC46            ------>ZmHOX2a(1) ---------->ID1 ------>ZmHOX2a(1)------>NtERF2<---------MYB52(1) -->ZmHOX2a(1)    <---------MYB52(1)    <----------DOF2  <-----------HVH21<---------ATERF1(1)   tcactggtctcttcctctacgttcgctccttcgtctctctgtctttcctcggtggtctcggtgacgccactctcgccggtggctccctcgccgccgcatt  21156400            --------->ARR14(2)            <---------ARR14(2)            <---------GLK1(2)    <-----------GT1                           <-----------RAV1(2)   --------->YAB1           --------->LBD16                        <----------DOF2           <-------   <---------ICU4   <----------DOF2            <---------ANAC46--------->ANAC58--------->ANAC58 ->RAV1(1)--------->LBD16 <---------LBD16  <-------GAMYB       --------->ANAC58--------->ANAC58  ---- >LBD16 <---------LBD16 <-----------GT1   <---------DEAR3(1)   --------->ANAC46--------->ANAC46<-----   tgcaaacatcaccggatactctcttttctccggtttaaccatgggcgttgagtctatctgttcacaagcctttggagccagacgctataactacgtctgc  21156500                              <-----------HVH21                            --------->ARR11(3)                             --------->ANAC46                              <---------GLK1(2)                         ------>ZmHOX2a(1)                                 <---------ARR11(3)                      ------>ZmHOX2a(1)                                    <---------ARR14(2)                 --------->YAB1                                           --------->HSFC1(2)                --------->HSFB2a(1)                                       <---------HSFC1(2)                ----------------------->TaNAC69(2)                        --------->HSFB2a(1)  <---------ZAT6--------->HSFC1(2)                                        <---------HSFB2a(1) --DEAR3(1)     <---------HSFC1(2)           <-----------HVH21  ------->TEIL--------->GLK1(2) ----->LBD16    <---------HSFB2a(1) --------->ZAT14        <---------AtLEC2--------->ARR14(2)   <---- ----LBD16   <------ZmHOX2a(1)<-----------TGA1         <----------DOF2   ----------->ARR10     <-----   gcgagtgtcaagagaggaatcatcctccttctcgtcacttctctccctgttacacttctttggatgaatatggagaagattcttctaatcttgaaacagg  21156600  Previous    Next  AGI:  At5g52050.1    Description:  MATE efflux protein-related. similar to MATE efflux protein-related [Arabidopsis thaliana] (TAIR:AT4G23030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70400.1); contains InterPro domain Multi antimicrobial extrusion protein MatE; (InterPro:IPR002528) Range:  from: 21156088    to: 21157869    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version