Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      >>>>>>>>>NAP                                  --------->bZIP60(2)            <---------ZAT2        ===================bZIP_DOF                                       -            <---------At4g35610   <---------O2                                  ------>ZmHOX2a(1)   <            --------->ZAT2        --------->ANAC46                              <----------DOF2     <            --------->At4g35610   --------->ANAC58                              =====================           ----------->RAV1(1)    --------->O2                                ----------------->AGL3-         --------->At4g35610      --------->ANAC55(2)                     <---------DEAR3(2)        -         --------->LBD16          <---------ANAC55(2)                     <---------MYB46(3)        -        --------->ANAC46          --------->ANAC55(1)                    <---------ANAC46           -       <---------LBD16            <---------TGA1a                       <------NtERF2             <--     --------->ARR14(2)           --------->TGA1a                      ------>NtERF2---------->DOF2 -     <---------ARR14(2)           --------->ANAC58                     <---------SPL7           -----    <---------CCA1(2)         ------>NtERF2                            <-----------HVH21       ------ ---->DEAR3(1)               <---------ARR14(2)                       <---------DEAR3(1)       ------ ---->RAP2.6(2)              --------->ARR14(2)        <------ZmHOX2a(1)--------->ATERF1(1) --------- --->ATERF1(1)               --------->PCF2           ----------->GT1 --------->DEAR3(1)  --------->MYB52(1) -->At4g35610              --------->LBD16          <---------LBD16   <---------ANAC46    <---------DOF5.7(2) ---At4g35610            <---------LBD16  ---------->DOF2        --------->MYB52(1) =================   gctcttatatccgcagcagagtttgaaaccggagccacgtaagtcaaagctaaaccaggaaaattcaaaacggcgtcgggtccttttaaagctaacgcag  21141800              <------NtERF2              --------->ATERF1(1)              <---------ATERF1(1)             <---------ERF1             <---------RAP2.3(1)             <---------ATERF1(1)            <---------RAP2.6(2)            <---------RAP2.3(2)            --------->ATERF1(2)           <------NtERF2           --------->ATERF1(1)           --------->RAP2.3(1)           --------->At4g35610          <---------DEAR4(2)          <---------ATERF1(1)          <---------RAP2.3(1)         <---------DEAR3(1)        --------->At4g35610    <---------SPL7 -------->O2<---------DEAR3(1)  --------->LBD16 ---------TGA1a              --------->SPL7                      <---------bZIP60(2) ---------O2<---------ATERF1(2)<---------ANAC46                  <---------ANAC58 =========bZIP_DOF           --------->MYB52(1)                  <---------ANAC55(2) -------->ANAC58            <---------ARR14(2)                   --------->ANAC55(2) -------->ANAC58           <---------SPL7                        <---------ANAC55(1) -------->bZIP60(2)      --------->ANAC46                        <---------ANAC58 -------->TGA1a  <------NtERF2<---------LBD16                    <---------ANAC46 -------ALFIN1--------->At4g35610                                <---------O2                    <--- -------->ANAC46--------->RAP2.6(2)                            <-----------GT1                   <--- ->NtERF2<---------RAP2.3(2)--------->ARR14(2)               <----------DOF2                  <------ --->DEAR3(1)------>NtERF2--------->LBD16                ---------->ID1              --------->GLK1(1) --->RAP2.3(3)<---------At4g35610                    <---------ANAC58               <---------ARR14(2) >ANAC46<---------At4g35610<---------MYB52(1)        <---------ANAC58               --------->ARR14(2) =========bZIP_DOF      <---------LBD16           <---------GLK1(2)               --------->ANAC46<--   ccacgtcgtaagcggcggcagccatctccggtaccggataagtcccgagccaaattcttgtcgttttacgtggctctctaatctccgatacccattttcc  21141900                                                                                --------->ARR11(3)                                                                                <---------ARR11(3)                                                                                <---------ARR14(3)                                                                               <------MYB46(1)                                                                            <---------MYB52(1) <---------ANAC58                        --------->GLK1(2)                 --------->LBD16 <---------ANAC46                   --------->LBD16                   =============================HOX2a_HOX2a <---------ANAC55(2)               <---------ANAC46                   ------>ZmHOX2a(2) <---------ANAC58--------->LBD16   --------->LBD16               <---------MYB52(1) <---------ANAC55(1)      <---------ANAC58                      --------->LBD16<------MYB83 --------->ANAC55(2)      <---------ANAC58           <---------ARR14(2)  <---------LBD16 --------HVH21 ----------->RAV1(2)<---------LBD16    <---------MYB52(1) --------->MYB52(1) ----GAMYB--------->ARR14(2)  <---------ANAC58       --------->ARR14(2)<---------ALFIN1     ========= -----GT1 <---------ARR14(2)  <---------ANAC58    <------NtERF2<---------DEAR3(1)      ----------->HVH21 -------MYB52(1)--------->LBD16<----------DOF2  <---------DEAR3(1)    --------->MYB46(3)    <------ZmHOX2a(1)   gttacgtagtcgaatccccctgaaaatagagtgcttgccggataatccagtcgccgttcttctcgccggtgatccaccggaaggtctcggtgaaggagaa  21142000                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                   <------NtERF2      <---------MYB46(3)             <---------AtMYB61                                --------->TGA1a         --------->MYB55(2)        ------>ZmHOX2a(1)                                     <---------TGA1a        <---------AtMYB61      =======================HOX2a_HOX2a                      <---------O2       <---------At5g28300-      ------>ZmHOX2a(2)                       <---------WOX13(1) <---------DEAR3(1)  --------->ALFIN1    <---------ARR11(3)              --------->ANAC58     <---------O2    <---------ANAC58  <------NtERF2    <---------ARR14(2)              --------->ANAC58     --------->ANAC46<---------ANAC58<---------DEAR3(1)    --------->ARR11(3)<------ZmHOX2a(1)    <---------YAB1--------->O2 <---------MYB52(1) --------->ETT(1) ============HOX2a_HOX2a  <---------WOX13(1)--------->ATHB12  --------->O2       <---------LBD16<----   gaagatgatcctggtgaggtttgaggagattgatcagtaggcaatgtgattgagacttcacgagacgtcgtcgtttcttgattcacggtggtcggagaat  21142100  <---------YAB1 ---------ICU4 ------->ICU4 --------YAB1 ---->ATHB1 -----HAHB4 ----->ATHB51 ----->YAB1 ------ICU4 ---->ICU4                                                                <-----------RAV1(1) -------->YAB1                          <-----------GT1                   *TSS     ---------->DOF2 <- -----YAB1   ---------->DOF2        <---------TOE2(3)             <---------MYB52(1)           <-----   tattattattcgacataaagaagcttaatgcttaaactaatgttacaatgtgtttttgtttgtgttctgtttttttttgttgtatcaaagtgtgtttgtg  21142200                                                       --------->ZAT2                                                       --------->At4g35610                 --------->ANAC46                                                       <---------HSFB2a(1)           <-----------HVH21                                                       <---------HSFC1(2)           ----------->GT1                                                       --------->HSFC1(2)         <---------ZAT2                                                       --------->HSFB2a(1)        --------->At4g35610 <---------AHL20(2)                           <-------TEIL   <---------MYB52(1)   <---------At4g35610 ----------TBP              ----------->GT1 <---------ARR14(2)                  --------->ZAT18 ----ANAC46               <------------CBF  --------->ARR14(2)<----------DOF2--------->CCA1(2)     <-   tatatatatgatgtttttgaatgagagagattgtaaaaccgtggcaaattcgtaagaagctccgtttttttgttagaagatgtgagctgttacacataaa  21142300                                                                                 <---------AHL20(2)                                                                         <---------ANAC46                                                                      <---------MYB52(1)                                                                     --------->At4g35610                                                                     <---------At4g35610                                                                   <-----------RAV1(2)                       --------->YAB1                             ------>ZmHOX2a(1)            --------->ATHB12   ---------->DOF2                   --------->TOE2(3)     <---------YAB1           <---------YAB1 ------>ZmHOX2a(2)               --------->TOE2(3)      --------->AHL20(2) --------YAB1         <---------YAB1                      <---------DAG2--------->ATHB12   tacgattagatttatgatttgtttatgatcgtataaagagaaattgcaattttgctctcaccttattcctcagttgattgtatttaattcttataaaaaa  21142400                                                 ----------->ARR10                   ----------->GT1          ---------->DOF2                     <---------MYB52(2)             --------------->AGL15        --------->AHL20(2)               --------->ANAC58            <---------ANAC46              <---------AHL20(2)               --------->ANAC58     -----            <---------ANAC58       ----------->GT1                         --------->ANAC46     -----            <---------ANAC58    <---------ARR14(2)                --------->REM1(2)          ------>MYB83       <---------ICU4           --------->ARR14(2)         ------->TEIL  --------->CCA1(2)   ------>MYB46(1)       --------->ATHB12         <---------ARR11(3) <---------ARR14(2) <---------ZAT6       <---------MYB59   actggctactcattgcttaaaatgtcaaaaccaagatttgttaattaaaagtagatttgtgaaccccatgtagagataagccacttacgaagaccaaatc  21142500                                                            <-----------GT1                                                         --------->MYB52(2)                                                       <---------MYB52(1)                                                 --------->ATHB12                                ----                                                 <--------ATHB1                              --------                                                 -------->HAHB4                           --------->YAB1                                                 <---------ICU4                     --------->YAB1                                                <---------ATHB12                --------->AHL20(1)                                                <---------YAB1                  <---------AHL20(2)                                           --------->ANAC55(2)                  --------->AHL20(2)---          <---------DAG2                   --------->ANAC55(1)             --------->At5g28300  ----- ---->YAB1<----------DOF2  --------->WOX13(1)   --------->ICU4    <---------ATHB12  ----------->GT1 ------>GT1              <---------ATHB12  <---------ANAC55(2) --------->ZAT6   <---------AHL20(1)---   gtaaactaaacacttttttttttggtaatcaatcgcaaactaaacacttaatgattcgatagttaccactaattagcagtaatttattgtaacaataaga  21142600                                                              --------->GLK1(2)                                               <---------ANAC46    ----------->GT1                            <---------ANAC58                      ----------->GT1   <------NtERF2                        <---------YAB1       --------->KAN4(2)      <---------TOE2(3) <-----------RAV1(2)                <-------GAMYB           <---------GLK1(1)       --------->DAG2 ----->RAP2.6(3)                   <---------MYB46(3)      <---------ARR14(2)--------->ANAC58 ->YAB1                            ----------->GT1         --------->ARR11(3)--------->ANAC58 ------>ANAC58                    <---------TOE2(3)        --------->ARR14(2)--------->ANAC46       < ---->MYB52(1)                    ---------->ID1  <---------WRKY18(1)    <---------ALFIN1 --------->REM1(1) ------>ANAC58                <----------DOF2  <---------ANAC58          ----------->RAV1(1)       <-   acggcagggtattatcaaattggtttttgagactttgtggttataagtggcttgacttatggatattctattcagccacacgaaaaaaggttacaacttg  21142700  Previous    Next  AGI:  At5g52020.1    Description:  AP2 domain-containing protein. Identical to Ethylene-responsive transcription factor ERF025 (ERF025) [Arabidopsis Thaliana] (GB:Q9FJ90); similar to DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] (TAIR:AT1G12630.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70406.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 21141184    to: 21142174    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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