Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              ----------->RAV1(1)                                                            --------->RAP2.3(2)                                                            --------->RRTF1(3)                                                          ------>NtERF2                                                          <---------ATERF1(1)                                                    ------>NtERF2                                                 ==============================HOX2a_HOX2a                                                 ------>ZmHOX2a(1)                                                 ===============================HOX2a_HOX2a                                             --------->DEAR3(1)                                             <---------ALFIN1                                            <------NtERF2 --------->At4g35610                                            --------->ATERF1(1)                                            --------->DEAR4(2)                                            --------->RAP2.3(1)                                           <---------ATERF1(1)                                          --------->RAP2.3(2) <------NtERF2                                          --------->RAP2.6(2)<------NtERF2                                          --------->ATERF1(2)--------->LBD16                                          --------->DEAR3(1)--------->RRTF1(2)                                          <---------ATERF1(2)------>NtERF2                                         --------->RAP2.3(1)--------->DEAR3(1)              ------>ZmHOX2a(1)         --------->ZAT2 <---------ATERF1(1)             <---------ALFIN1           ------>NtERF2  ------>NtERF2    <------ZmHOX2a(2)          <---------ALFIN1              <---------ATERF1(1)--------->RAP2.3(1)         --------->DEAR3(1)            ----------->HVH21  --------->LBD16       ------>NtERF2                 --------->At4g35610 --------->ANAC46      --------->DEAR3(1)             <---------At4g35610 --------->DEAR3(1)      <---------ALFIN1           <---------ALFIN1--------->At4g35610   --------->ARR11(3)    <---------ATERF1(1)       --------->DEAR3(1) <---------At4g35610   <---------ARR11(3)    ------>ZmHOX2a(1)         <---------ALFIN1------>NtERF2--------->RRTF1(1)                      --   <---------ALFIN1        <---------ALFIN1------>NtERF2 <---------ALFIN1------>ZmHOX2a(2)         -- --------At4g35610   <---------ALFIN1----------->RAV1(2)--------->ATERF1(1)    --------->LBD16     --   ctgctcctccgccctcctctccccctccctcaccccctcccctgccgcctcctctgcctccgccgcagttttagatccctccgtcgtagtctcattctga  21134600                                                                       --------->ANAC58                                                                       --------->ANAC58                                                                     ---------->DOF2                                                                    <------NtERF2                                                                   <---------RAP2.6(3)                       <----------DOF2                            --------->RAP2.3(3)                     <---------ZAT2                               --------->RAP2.3(2)                     --------->ZAT2                               --------->DEAR3(1)                     --------->At4g35610                          --------->ANAC46                     <---------At4g35610                          --------->RAP2.6(2)                    ------->TEIL                                 --------->ERF1             <-----------RAV1(2)                                 --------->ATERF1(1)           <-----------HVH21  --------->ARR14(2)                 --------->RAP2.3(1)         <---------At4g35610  ------->TEIL                      <---------ATERF1(1)         --------->At4g35610 <---------GLK1(2)      <---------LBD16------>NtERF2 --------->At4g35610 ------->ANAC46  --------->ANAC46                   <-----------RAV1(2)--------->AtLEC2        ------ ------->ANAC58  --------->ANAC58       <------ZmHOX2a(1)   --------->ANAC46 --------->GLK1(2) ------ ------->ANAC58  --------->ANAC58   ------>ZmHOX2a(1)  <------ZmHOX2a(1) --------->YAB1   <----------ID1   aacgccattgcagcttcagacgcagctttctgaatctccttaggacaagtagtctcaggaatacgaagccgccaagcagaatcagcgaaattgagacaag  21134700                                                                       --------->MYB52(1)                                                                       ------>MYB83                                                                       ------>MYB46(1)                                                                     <---------MYB52(2)                                                                     <---------MYB111(1)                                                                     <---------MYB59                                                                     <---------MYB46(2)                                         --------->ZAT2            ------->TEIL   <---------TOE2(2)                                         --------->At4g35610   --------------->AtSPL3                                       ------->MYC2            --------->DAG2     <---------TOE1(2)                                       <-------PIF5            <---------------AtSPL3                                       <-------MYC2            <---------------AtSPL8                                       ------->MYC3            --------------->AtSPL8<---------GLK1(1)                              <---------ICU4            <-----------HVH21        ------>ZmHOX2a(1)                           --------->REM1(1)           --------->DEAR3(1)    --------->ARR14(2)                         ----------->RAV1(1)           ------->GAMYB<---------ANAC55(2)                       --------->At4g35610 --------->RAP2.3(3)---------->DOF2<---------ARR14(2) --->ANAC58      ---------->DOF2       ------->PIF5   --------->MYB46(3)    ------>MYB83 <---------YAB1 --->ANAC58   --------->At4g35610      <-------MYC3   --------->DEAR3(2)    ------>MYB46(1)   cagagcgaccacgaagagctaaagcagcaacatcatgagcacgagcagccatttcaaccgtcggaaaagtacctaaccaaatcctagatttcttattagg  21134800                                                                          --------->HSFC1(2)                                                                      --------->ANAC58                                                                      --------->ANAC58                                                                      --------->ANAC46                                                                      --------->ANAC55(2)                                                                <-----------HVH21                                                             --------->TGA1a                                                             <---------ANAC55(2)                                                             <---------ANAC46                                                             <---------ANAC58                                                             <---------TGA1a                                                             --------->O2 --------->HSFB2a(1)                                                             <---------O2 <---------HSFB2a(1)                                                             <---------bZIP60(2)                                                             --------->ANAC55(2)                                                             <---------ANAC58                                  ----------->HVH21          <---------ANAC55(1)                                --------->At4g35610         <-----------------------TaNAC69(2)                                <---------At4g35610         ----------->STF1                                ------>ZmHOX2a(1)          <---------TGA2(2)            --------->ZAT2                           --------->GLK1(1)              ----------->HVH21             <---------At4g35610                           <---------GLK1(1)              ----------->TGA1<---------HSFC1(2) <-------                          <---------GLK1(2)             --------->At4g35610             <---------ZAT2                       --------->HSFB2a(2)   ------>ZmHOX2a(1) --------->ALFIN1    ------>ZmHOX2a(1)   ctctctaacttcacaaacccatttaccagaattcctctgacgaactcctctgtaaatcggatgacgtgtctcacgaaacttcttcctcccagctcgtttc  21134900                                                          --------->ATHB12                                                         <---------YAB1                                                      ------>ZmHOX2a(2)                                                     <------ZmHOX2a(2)                                                    <---------ARR14(2)                                                    --------->ARR14(2)                                                    --------->AGP1                                                    --------->ARR11(3)                                                    <---------ARR11(3)                           --------->ZAT6          --------->GLK1(1)                  <----------DOF2               --------->LBD16            <---------At4g35610               <---------LBD16------>ZmHOX2a(2)                ------- --CCA1(2)  --------->At4g35610    --------->ZAT14 <---------GLK1(1)       --------->CCA1(2)  <------   tttggacaacttgaagctaactttggtgaacactcactactgtctgaaaccggagatctatgatcggagattgagagaaacgagtctgggaatgtagagt  21135000                                                                                                 ----                                                                                                -----                                                                                       <---------AHL20(2)                                                                                       <---------YAB1                                                                                      <---------AHL20(2)                                        <----------DOF2                           <---------CCA1(1)                                   <-----------GT1                       <----------DOF2  <---------YAB1      <-------TEIL        --------->ARR11(3)    <----------DOF2 --------->ALFIN1  <---------RVE1(1) ---->GT1                 <---------ARR11(3)<---------CCA1(2) <---------At4g35610<---------ARR11(3) ---ZAT6        <----------DOF2<---------AHL20(2)           <-----------RAV1(2)  --------->ARR11(3)   aaaatggattcattttttctttggataagatgttttatttctctttctatctttttatgttttcaggtgttggaacttttggagatatttttattacaga  21135100                                                                                                -----                                                         <---------DOF5.7(2)              ------->MYC2                                                    ------>ZmHOX2a(2)                     <-------MYC3                                                   <------ZmHOX2a(2)                      ------->MYC4                                                  <---------AGP1                          -------->ABF1                                                  <---------ARR14(3)                      ------->MYC3                                                  --------->GLK1(2)                       <-------MYC2                                                  --------->ARR14(2)                      <-------MYC4                                                  --------->ARR14(3)                     <---------TGA1a                                                  <---------ARR14(2)     --------->ANAC58--------->TGA1a                                                  --------->ARR11(3)     --------->ANAC46--------->ANAC55(2)                                            --------->ANAC58           <---------ALFIN1  --------->ANAC46                       <---------AHL20(2)   --------->ANAC58    <---------O2             <---------ANAC55(2)                   <---------AHL20(2)       --------->ANAC46    --------->O2             <---------O2        --------->ALFIN1                   <---------LBD16 <----------ID1--------->ANAC58--------->O2 ----->DAG2  <---------ANAC46   --------->DAG2    <---------ARR11(3)--------->PCF2 <---------ANAC46 ----->DOF2<---------ANAC46    ---------->DOF2   <------ZmHOX2a(1) <-----------HVH21     ============   aagtgaagaagtgttgtgtttttattttataagaaaagtgagaaacacggaggatctggtaacgacaagtgtcccacggtatgtgacttacacgtgtcct  21135200                                           --------->ARR14(2)                                         <------MYB83                                         <---------MYB46(3)                                       <---------ANAC58                             <---------AHL20(2)                                       <---------ANAC46                          <------------CBF                                       <---------ANAC58                        --------->AHL20(2)                                     <---------MYB46(3)                        --------->AHL20(1)                                  <-----------RAV1(1)                          <---------AHL20(2)                                <---------ZAT14        <---------MYB46(3)      <---------AHL20(1)        --------->ZAT14       --------->ZAT18         <---------TOE1(2)     <---------AHL20(2)       <----------DOF2        <---------ZAT14   --------->ARR14(2)        <---------YAB1       <---------DAG2         --------->ZAT14   <---------ARR14(2)      <---------AHL20(2) ->ZmHOX2a(1)            <------------CBF<------MYB46(1)               --------->ICU4 =================bZIP_DOF <---------ANAC46<---------ARR14(2)          --------->AHL20(2)   tctgaatcactttacttcgtctaagtgtattgtgtactgtggctggttccgattcgatggttcagttttgatatttattattttattgaatttaagtatg  21135300                                                                                --------->TGA2(2)                                                                               <-----------HVH21                                                                               <---------RAP2.6(3)                                                                               <-----------TGA1                                                                              <---------O2                                                                              --------->TGA2(1)                                                                              --------->ANAC55(2)                                                                              <---------ANAC55(2)                                                                              <<<<<<<<<<HY5                                                                              >>>>>>>>>>HY5                                                                              --------->O2                                                                              <---------TGA2(1)                                                                              <---------bZIP60(1)                                                                              --------->bZIP60(1)                                                                             ----------->STF1                                                                 <-------TEIL<-----------STF1                                                                --------->ARR14(1)                                                                --------->CCA1(2)                                                               --------->ARR11(1)                                                               <---------ARR14(2)                 ---                                                               --------->ARR14(2)                 >>>                                                     ----------->GT1        <---------TGA2(2)    ----                           <----------ID1           --------->DAG2       <------ZmHOX2a(1)  ------->MYC3          <---------------AtSPL8                   ---------->DOF2     <---------TOE2(3) <---------ALFIN1       ---------->DOF2   ---------->DOF2<----------DOF2    ---------->DOF2 ----------->TGA1 <-------MYC3   gtgttcggagaaaggggacgatttagaaaaagacaaaacagtctttagttttaaaaagtgataaagatacgttgaggatgacgtcatgggaacacgtttt  21135400            <---------ZAT14         ----------->GT1                                           <------NtERF2         <---------ZAT6                                            --------->At4g35610       <---------ANAC58                      ------->MYC3          <---------At4g35610       <---------ANAC46                      <-------MYC3        --------->SPL7       <---------ANAC58                     <---------TGA1a    <---------SPL7  <-------GAMYB                             --------->O2      <---------ANAC58  >>>>>>>>>TAC1                             <---------O2<---------ANAC46                 --------->ARR14(2) --------->AtMYB77        <---------MYB46(3)--------->TGA1a   <---------ANAC58           <---------ARR14(2) >>>>>>WRKY18          <-----------RAV1(1)<---------ALFIN1   <-------TEIL --------->ANAC58     <----- ------->HVH21   --------->ZAT14  --------->DAG2     ----------->HVH21    --------->ANAC58     <-----   tgacagttggagtgtaaactgctctctgtggttcgaaaggtgagccacgtttgaagggacgggttcgtccgctgtctagccacggtttggggtttcgctt  21135500  Previous    Next  AGI:  At5g51990.1    Description:  CBF4/DREB1D (C- REPEAT-BINDING FACTOR 4); DNA binding / transcription activator/ transcription factor. Identical to Dehydration-responsive element-binding protein 1D (DREB1D) [Arabidopsis Thaliana] (GB:Q9FJ93;GB:A0MFN5;GB:Q1PDK4;GB:Q6J9R8); similar to CBF2 (FREEZING TOLERANCE QTL 4), DNA binding / transcription activator/ transcription factor [Arabidopsis thaliana] (TAIR:AT4G25470.1); similar to DREB1-2 [Brassica juncea] (GB:ABB17253.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ERF, DNA-binding; (InterPro:IPR001471) Range:  from: 21134339    to: 21135013    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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