Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                <---------At4g35610                              --------->At4g35610                            ------>ZmHOX2a(2)                           <---------GLK1(1)                           <------ZmHOX2a(2)                           --------->GLK1(1)                          <---------ARR11(3)                          --------->ARR11(3)                          --------->GLK1(2)                          --------->ARR14(3)                          <---------ARR14(3)                          <-----------ARR10                          <---------ARR14(2)                          --------->ARR14(2)                         <------ZmHOX2a(1)                       <---------TOE1(2)              <---------MYB46(3)                  <-------GAMYB                      <--------P                 --------->MYB111(1)                <-------GAMYB                 --------->MYB55(2)                <---------MYB46(3)                 --------->MYB111(2)              <---------ANAC58                            -------                 --------->MYB52(2)               <---------TOE2(3)                           <------                 <-----------RAV1(1)              <---------ANAC58                        --------->ARR14(2)                 <---------MYB46(3)               <---------RAP2.6(2)                   <---------AHL20(2) ----->HVH21    <--------P<---------AGP1          <---------ANAC46               ----------->GT1 ----   acatggataagttatctggttgttgcaggatctgctgttctcatacaacattgcggttgatagaactgaagaaatgaaacgagtgcttaataaatctgca  21128300                                                                    --------->LBD16                                                                   --------->LBD16                                                                   <---------LBD16    --------->ALFIN1                                              <---------ANAC46   <---------ZAT14                                                <---------HSFB2a(2)   --------->ZAT14                                                <---------LBD16   --------->REM1(2)            ------->TEIL                     <---------LBD16    --------->ATHB12  --------->ALFIN1           <---------ANAC58           <----------DOF2            --------->ICU4 -->At4g35610                <---------ANAC58         ------>ZmHOX2a(1)            <---------YAB1 ---At4g35610       ------>ZmHOX2a(1)          <-------TEIL   <----------DOF2   --------->ICU4 -->NtERF2          --------->LBD16       --------->AtLEC2  ---------->ID1      <---------MYB52(1)<--   gccagtgtagggcttcgtcttcctgaagtttacgagccttgatcatgcattcattcctctttgtctttccgggggatgagtcgttatgatttcttcattt  21128400             <---------MYB46(3)             ----------->GT1          <----------DOF2                                                                         <--       --------->ARR11(3)                                                                         <--       <---------ARR11(3)                                                                         <-- <---------ZAT14                                                        <----------DOF2           --- <---------ETT(2)                                                    <---------TOE1(3)  <---------ARR14(2) --------->ETT(2)                                                <----------DOF2        --------->ARR14(2) --------->ZAT14           --------->AHL20(2)                   --------->TOE2(3)      <---------GLK1(1) -------ANAC46         <---------YAB1----------->GT1       <----------DOF2   --------->ANAC55(2)  <--   ctgtggacaggtctttggttaatttttgattatatgagatagtaaatgaagccagagagctcttttcctttaagcttttaagtattgacaaatccgagtt  21128500           <---------AHL20(2)           --------->AHL20(2)                                       <---------ARR11(3)   <-------GAMYB                           <------ZmHOX2a(1)        --------->ARR11(3) -------ANAC58               <---------ALFIN1            ------->TEIL -------ANAC58               ----------->RAV1(1)      --------->AtLEC2------>ZmHOX2a(2) -------ANAC46              --------->ANAC46   --------->ALFIN1 --------->YAB1                 ------ ------>ALFIN1       <---------ZAT6        ==================================HOX2a_HOX2a  --------->MYB46(3) ---------RAV1(1)    <-----------RAV1(1) <---------TOE2(3)     <-------TEIL  <---------YAB1   -------   gtgtgggttacaattttttgttagtgttgcaccacatttgttttaggatgtgttccatgaacatattcatgatcttgttatgtttgatggaaaccaccaa  21128600                                         --------->ANAC58                                      ------                         --------->GLK1(2)                                    --------->bZIP60(1)                        --------->ARR14(2)   --------->ANAC58                 <---------bZIP60(1)                        --------->KAN4(2)--------->ANAC58        --------->AHL20(1)          --------                        <---------ARR14(2)   --------->ANAC58    --------->ARR11(3)         <--------                 <------------CBF      ---------->DOF2           <---------ARR11(3)       <---------ICU4              ------------>CBF      ---------->DOF2           --------->AHL20(2) --------->ATHB12<--- ---->DOF2   --------->ANAC58     <-------TEIL   ---------->DOF2 <---------AHL20(1)   <---------YAB1 -->AtMYB61  --------->ANAC58    --------->CCA1(2)   --------->AHL20(2)*TSS<---------YAB1--------->ICU4   agtgagagaattcagaagcaattgcatattctgagatacaaagaagccagccaaagtaaatgaaaaaaatatttcttatgacttcattagcattatgata  21128700                                                        <---------ICU4                                                        --------->YAB1                                           --------->ARR14(2) <---------------AGL15                                           --------->ARR11(3) --------------->AGL15                                           <---------ARR14(2)<-----------------AGL2                                          ====================HOX2a_HOX2a --->CCA1(2)    <---------ANAC58 --------------->AGL15 <------ZmHOX2a(2) ->YAB1      <----------DOF2     <---------------AGL15 <---------ATHB12    <---------YAB1        ---- -YAB1   <-----------GT1--------->TOE2(3) <------ZmHOX2a(1)  <-----------------AGL3              <--- ------TOE2(1)  <---------ANAC58 =============================================MADS_MADS----------->GT1   cgaggcataaaaaacctttcttgaaaacttaaaaactatttagaggaacttgttccgatcatgtctatatttggatgatgagtcaaaaatggtaaacaag  21128800                                                           <---------MYB52(1)                                                      <---------ALFIN1   <----------DOF2                                                     <---------MYB55(2)  <---------DAG2                                                     --------->MYB46(3) <-----------------AGL3     <-       ----------->GT1                         --------->ANAC58       <-----------GT1            <--- ----->ARR11(3)                                --------->ANAC46     <-----------GT1 <---------ANAC58 ------ARR11(3)     --------->TOE1(3)          --------->ANAC58<---------ZAT6       <---------ANAC58   atttatgaagagaaattagaaaccataagggttttatccaaaactcgataagccatccaccgctagtgtttatcactttatctggttcttgttttgtatt  21128900          --------->AHL20(2)                                  <---------TOE1(3)          <---------AHL20(2)                                  <---------TOE2(3)         <---------AHL20(2)                               <----------DOF2                     -------      --------->AHL20(2)                       --------->TOE2(3)                <---------ANAC58      <---------AHL20(2)              <----------DOF2--------->YAB1             <---------ANAC58     --------->AHL20(2)       --------->At4g35610    <---------ICU4        <----------DOF2 ---------- ----------GT1                <---------At4g35610   <---------YAB1     <--------P<----------DOF2 ------AHL20(2)<---------ANAC46 ----------->HVH21   <---------ATHB12  <---------MYB52(1)------>ZmHOX2a(2)   ttttctatttatttatttagtggagacatcgatgctgacactttcattttcttaatcattctttaaggctctggtagctttggcttttgatctaaaagct  21129000                    <----------CDC5             ---------->DOF2                   <---------At4g35610      <---------LBD16 -->At4g35610      --------->At4g35610     <---------ANAC46                             >>>>>>>>>TBF1 >DOF2        <----------DOF2            --------->CCA1(2)                     <---------TOE2(3)    <   gagagtcaatagagagctttgtgctgagcatagcagagaagagttatggggaaaggagggatgtctcaaggagaaggctcaaaggttgaagaagaaaaca  21129100              <------MYB83              <------MYB46(1)              ----------->GT1             <---------MYB46(3)             --------->MYB111(1)             --------->MYB46(2)             --------->MYB111(2)            <--------P            <---------MYB55(1)           <---------ANAC58           <-------GAMYB           <---------ANAC58          <------MYB83          <------MYB46(1)          --------->ATHB12          --------->MYB55(2)          <---------DEAR3(2)          <---------MYB46(3)          --------->MYB52(2)         <---------AtMYB61         <---------MYB46(3)         --------->MYB111(1)            <----------DOF2        <--------P                     <---------DAG2       <-------GAMYB                 ------>MYB46(1)      <---------MYB46(3)             ------>MYB83      <------MYB46(1)                -------->P      --------->ATHB12           --------->CCA1(2)      <------MYB83               <------ZmHOX2a(2)         <------MYB83                <---------GLK1(1)   <---------ANAC46             --------->AGP1             <------MYB46(1)        <---------WOX13(1)   <---------ANAC58             --------->ARR14(2)       <---------MYB52(1)     --------->ATHB12   <---------ANAC58             <---------ARR14(2)      <-------GAMYB   --------->CCA1(2)  --------->ZAT2                <---------ARR11(3)     <---------ANAC58<---------ARR11(3)  <---------ZAT2                --------->ARR11(3)     <---------ANAC58--------->ARR11(1) ---------RAP2.6(2)       --------->ANAC46    <<<<<<<<<TBF1<---------MYB46(3)  <---------YAB1   tggctgcttggttggttggtatcaataccctcaagatccaaccttttcttcttccttccgttggtaagacaaagatttgatttgattggatatttggatt  21129200  Previous    Next  AGI:  At5g51960.1    Description:  similar to unknown [Brassica juncea] (GB:ABM54450.1) Range:  from: 21127929    to: 21128574    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g51970.1    Description:  sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative. similar to oxidoreductase, zinc-binding dehydrogenase family protein [Arabidopsis thaliana] (TAIR:AT5G63620.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24583.1); contains InterPro domain Alcohol dehydrogenase GroES-like (InterPro:IPR013154); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain GroES-like (InterPro:IPR011032); contains InterPro domain GroES-related; (InterPro:IPR011597); contains InterPro domain Alcohol dehydrogenase, zinc-containing, conserved site; (InterPro:IPR002328); contains InterPro domain Alcohol Range:  from: 21128671    to: 21130629    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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