Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->HSFC1(2)                                           --------->MYB111(1)                                      ------>ZmHOX2a(2)                                     <------ZmHOX2a(2)                                     --------->CCA1(2)                                    --------->ARR14(2)                                    --------->AGP1 <---------HSFC1(2)                                    <---------ARR14(2)                                    <---------AGP1 <---------HSFB2a(1)                                    --------->ARR11(3)                                    <---------ARR11(3)     --------->ZAT14               <---------GLK1(1) >AGL15                            --------->GLK1(1)                                            <---- -AGL15                  --------->ANAC58 <--------P                                 --------->ANAC46 --AGL1                  --------->ANAC58<---------MYB52(1)        --------->At4g35610         ------ ->AGL1         <----------DOF2   ----------->ARR10--------->HSFB2a(1)        <---------------AtSPL8   gaaacactgaagaagggactttcagacaaggaagaagagatctggtaagtggaagggtcgtagttgagcaactgagagtaagagtacaaaccaattccta  21115800                                                  ------>ZmHOX2a(2)        --------->ETT(1)                                                <---------ARR14(2)         <---------ANAC46                                                --------->ARR14(2)       <-----------HVH21           <-------MYC3                         <---------AGP1--------->ARR11(3)           ------->MYC3                         <-----------ARR10       <-----------RAV1(1)     --------->ANAC58                          <---------CCA1(2)------>ZmHOX2a(2)     --------->ANAC58                        --------->ETT(1) <---------ARR14(2)   <---------ICU4                          <-----------HVH21  <---------ARR11(3)   --------->YAB1                         <---------MYB46(3)  --------->ARR14(2) <---------MYB46(3)  <---------ATHB12                       <---------AtMYB61  --------->ETT(2)     --------->MYB111(1) -----TOE1(2)                            <---------ZAT6     <---------ETT(2) <------NtERF2  <-------- >ZmHOX2a(1)     ----------->GT1  ---------->DOF2<------ZmHOX2a(2)      --------->ALFIN1 <--------P   tgtaatcaagacatgtgtaatgtgataaacccaagtgaaagtagtggtcggatctaagacggtcgatcttgtaagtgtcggagtagttggggtaagcttg  21115900                                                             --------->HSFB2a(2)                                                           <---------LBD16                                                           <---------ANAC46                                                         <---------SPL7                                                  <---------ARR14(2)                                                  --------->ARR14(2)                                              --------->At5g28300                                             <------MYB83<-----------HVH21                                             ----------->GT1 --------->LBD16                                             <------MYB46(1)<---------LBD16                                             <---------DEAR3(2)                                  <---                                            <---------MYB46(3)                                   <---                                            <---------DEAR4(1)                                   <---                                            <---------DEAR3(1)                     <---------ANAC46 <                                            --------->MYB46(2)                   <---------MYB46(3) <                                            --------->MYB55(2)      --------->ALFIN1            <----               --------->GLK1(2)           <---------ORA47(1)<---------HSFB2a(2) --------->MYB55(2)<-              <---------ARR11(3)    <---------ARR14(2)  ----------->HVH21       <---------AtMYB61<---              --------->ARR11(3)    --------->ARR14(2)<---------ANAC58       <---------DEAR3(1) <---- -ZAT2        <---------GLK1(2)     --------->GLK1(2) <---------ANAC58 <---------ANAC46        ------   gatgaaatcggagaaagattcttgatgagaaggaagagaatttgggtcggtgaattcggtgtccgggaagatggtggagacggtggtttgggcgaaatta  21116000                                                  <---------At4g35610                                                  --------->ZAT2                                                  --------->At4g35610                                                  <---------ZAT2                                        <---------ANAC58                                        <---------ANAC58          <---------ANAC46              <---------ANAC46         <---------LBD16                <------MYB46(1)         --------->At4g35610<--------P <---------DEAR3(1)        --------->MYB52(1) <-------GAMYB<------MYB83          --------->LBD16  <------NtERF2           <---------MYB46(3)     <---------ARR14(2) ------RAP2.6(2)        <------NtERF2  --------->MYB55(2)    <---------ANAC46 ------RAP2.3(2)       --------->MYB55(2)  <---------SPL7    <---------ANAC58 ------RRTF1(2)        <---------MYB46(3) --------->ALFIN1   <---------ANAC58                      <- ---------ANAC46      --------->ALFIN1 --------->MYB111(2)   ----------->GT1               --------->REM1(2) ---------DEAR3(1) <---------DEAR3(1)  <---------MYB46(3)  --------->SPL7                 ----------- -----LBD16        <---------DREB2C(2)<---------MYB55(1)   <---------At5g28300           <-----------HVH21 --------LBD16     <---------ANAC46   --------->ALFIN1   <---------SPL7                  --------->LBD16 ------RRTF1(3)  --------->MYB52(1)   <---------ANAC46  <---------MYB46(3)            --------->At4g35610 -----At5g28300 ----------->TGA1    <---------ANAC46--------->ALFIN1               --------->At4g35610 --->MYB52(1)   ----------->HVH21  --------->ALFIN1 <---------MYB46(3) ----------->TGA1 <---------ANAC46   cggcggagagtagcggaagtgacggtgggggttgaatgtggtgggtgttcggagctggtggtaccgtgaaatggtgacgatgagaagcagccgtgaaggc  21116100                             --------->MYB46(2)                             --------->MYB111(2)                             <---------MYB46(3)                             --------->MYB55(2)                             --------->MYB111(1)                             <---------AtMYB61              <---------GLK1(1)             <-----------ARR10<------MYB46(1)             --------->ARR14(2)             --------->GLK1(2)<------MYB83     <---------MYB46(3)      --------->ALFIN1  <------MYB83<---------HSFB2a(1)  <---------ANAC46          <---------MYB55(1)  <------MYB46(1)           <--------P --------->MYB111(2)  ---------->DOF2        <---------------AGL15 --------->MYB111(1) <XXXXXXXXXXXXXXXXXXXXMIR408     <---------ANAC46 <---------MYB46(3)--------->HSFB2a(2)       <----------DOF2   <---------ARR11(3)                 <-- --------->MYB55(2)--------->LBD16          <-----------------AGL3                    --------->ANAC58 <---------AtMYB61<---------LBD16<---------ZAT18     <---------ANAC58                 --------->ANAC58 --------->MYB46(2)<---------HSFB2a(2) <-----------GT1         --------->ARR11(3)    *TSS         --- --------MYB52(1)<---------LBD16 <-------TEIL--------------->AGL15  <---------YAB1<-----------HVH21 >HVH21     <---------GLK1(2)<---------DEAR3(1)      <---------ANAC58        <---------YAB1      <---   agtttggtggtgaagaatctccgggaaagggttggtgcatttttcttctttttttgggtgcaaaagatttatgactcttgtaattgtcaagtcattagcc  21116200                                                 --------->ANAC58                                                 --------->ANAC58           <---------AHL20(2)                   ------->TEIL           --------->AHL20(2)                 --------->ZAT18                                 -------    ----------->GT1                           <---------ZAT18                      <---------------AGL15    <---------ZAT6   ---------->DOF2          <---------ZAT14 <---------ANAC58     --------------->AGL15 -------ARR14(2) --------->ANAC58             --------->ZAT14 <---------ANAC58    --------->ZAT6   -- ------>ARR14(2) --------->ANAC58     ---------->DOF2     ---------->DOF2    <----------DOF2 -------- ------CCA1(2)   --------->ANAC46   <---------YAB1--------->TOE1(2)     <----------DOF2 ---------->DOF2   tatcttgtgttaaataaatacgctaaagtctaaagtttataaaagtagtgcacctaagacaaaagcttgtttctcttttcttttacactaaaaagaaaag  21116300                         <---------ICU4                        <---------YAB1                        --------->ICU4                      -------->HAHB4                      <---------ICU4                      --------->YAB1                     <---------YAB1                     --------->ICU4                                   --------->LBD16                   --------->YAB1                                    <---------HSFB2a(2)              <------NtERF2                   --------->DAG2      --------->ARR14(2)             --------->LBD16          <---------ARR14(2)     <---------ANAC58                       - --------->ANAC58  <---------ICU4--------->ANAC58   --------->ZAT18  --------->HSFB2a(2)            < --------->ANAC58<---------KAN4(2) --------->AHL20(2)   <----------DOF2                          <--- -->DAG2    <---------ANAC46     ----------->GT1    <---------ZAT14  --------->ANAC46        -------- ------->At4g35610--------->ICU4 --------->ANAC58   <---------ZAT18 <---------LBD16  <---------HSFB2a(2) -->DOF2   <---------LBD16 <---------YAB1    ---------->DOF2 <---------ANAC58        --------->HSFB2a(2)   cagaagcaaattaggcgggaataatgatgattatcaagaaaatactgaaaagtgttcactttgtcttgtttccgcaagtgtttttttttagaacgcgtag  21116400                                                                                    <---------------AGL15                                                                                    -----------------                                                                       --------->CCA1(2)          --------->ANAC58                                            --------->ARR11(3)       --------->WRKY18(1)               ------>ZmHOX2a(1)          <---------TOE2(3)    <---------ZAT6                      --------->TOE1(3)      --------->AtLEC2     --------------->AGL15 -------->ZAT14                <----------DOF2           <---------ANAC58          ----------------->AGL1 ---------ZAT14        <----------DOF2  --------->TOE2(3)<---------ANAC58   --------->ZAT6 ------ZAT6 ---------->DOF2    <---------DAG2           <---------ICU4<---------ARR11(3) ->REM1(2)--------->ANAC58  <-----------GT1       <-----------GT1   ----------->ARR10   agtttagtggtcaagaaagtgttttctttttcacttttgtttccttagctatttacaatgcttacatgctaagatataccactatgcccaattgagtaaa  21116500                                                                         <------NtERF2                            --------->ARR11(3)                          --------->LBD16                        <-------TEIL     <---------TOE2(3)         ---------->DOF2            <------                ----------->GT1    <---------AHL20(2)      <---------TOE2(3)    ---------->DOF2            ----------------------->TaNAC69(2)    <---------ARR11(3)  <---------LBD16     --------->AHL20(2)           --------->YAB1   <---------ARR11(3)    --------->ARR11(3)--------->DAG2    --------->AHL20(2) >AGL1    <---------ATHB12 <---------CCA1(2)     <---------CCA1(2)---------->DOF2  ----------->GT1   caaaaacagccaatagttatgttatatacatatctattttttttatgttatatatcttgttaatgaaaaaaaggcggaatataaaagattaaaaatatac  21116600                                                                              --------->RAP2.6(3)                                                                        <------MYB83                                                                     <-------GAMYB                                                                    <---------MYB46(3)                                                               ===================================HOX2a_HOX2a                                                            --------->ZAT14  <---------ARR14(2)                                                            <---------ZAT14  --------->ARR14(2)                                                       --------->ZAT14  <------MYB46(1)       -------          <---------------AtSPL8                       <---------ZAT14<---------MYB52(1)      -------   <----------DOF2  <-----------GT1               ---------->DOF2   <-----------RAV1(1)    ------>ZmHOX2a(1) -----GT1 --------------->AtSPL8                --------->YAB1 ------>ZmHOX2a(2)    <------NtERF2   caattcttttagttagtacaataaactctattttttgtatcaaatagctatcaaaagaacactgatctgtctgttggtatatcggcctcgctcctcaagc  21116700  Previous    Next  AGI:  At5g51920.1    Description:  catalytic/ pyridoxal phosphate binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G22980.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63651.1); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region (InterPro:IPR015424); contains InterPro domain Pyridoxal phosphate-dependent transferase, major region, subdomain 1; (InterPro:IPR015421) Range:  from: 21114332    to: 21116185    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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