Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               <---------ANAC46    ----                                                                             <---------ANAC58    ----                                                                             <---------ANAC58    <---                                                                        --------->LBD16          <---                                                                       <---------ANAC46       <------                                                                    <---------ARR14(2)       <-------                                    <---------DOF5.7(2)           --------->LBD16            --------    --------->ZAT14                --------->WRKY12             <---------LBD16            <---------DEAR3(2)    <---------ZAT14                --------->WRKY38(1)        --------->ARR14(2)    --------->YAB1 -------->ZAT6                    <---------MYB52(1)      --------->ZAT14 <--------P<---------ICU4 ---------ALFIN1                  --------->DOF5.7(2)     <-------TEIL<---------LBD16     <---------DEAR3(1) -->WOX13(1)                     <-------GAMYB         <---------DEAR3(2)<---------MYB52(1)<---------MYB46(3) -MYB52(1)                <---------TOE2(3)---------->DOF2<---------ZAT14<-------GAMYB    <---------TOE1(2) --TGA1          <------NtERF2  <---------ANAC46     <---------LBD16--------->ARR14(2)   <---------LBD16 --HVH21 <---------ZAT2  ---------->DOF2 <---------ARR14(2)   <---------ARR14(2)    --------->ATHB51   caacactggagagctcgtcgggatttttaaagttccgttaaccgatacagcaatagccggtacagttccggttccggttgcttcaattatcgccggttca  21112500                                                                                        <------NtERF2                                                                                       <---------RAP2.6(3)                                                                                       ------>NtERF2                                                                                       --------->LBD16                                                                                      --------->DEAR3(1)                                                                                      --------->RAP2.6(2)                                                                                      --------->RRTF1(2)                                                                                      --------->RAP2.3(3)                                                                                      --------->DREB2C(2)                                                                                      --------->RRTF1(3)                                                                                      --------->RAP2.3(2)                                                                                     --------->ATERF1(1)                                                                                     --------->RAP2.3(1)                                                                                     --------->ERF1                                                                                     --------->RAP2.6(3)                                                                                     <------NtERF2                                                                                    <---------ATERF1(1)                                                                                    --------->MYB52(1)                                                                                    ------>NtERF2                                                                                    --------->LBD16                                                                                   --------->ANAC46--                  <---------ARR14(2)                                              ------->GAMYB   ===                  --------->ARR14(2)                                              <---------MYB55(2)             --------->MYB52(1)                    --------->ANAC55(2)            --------->MYB46(3)-         --------->YAB1                           <---------LBD16               -------->P        --- ----->At4g35610  <---------ARR11(1)   ----------->HVH21                       <---------ALFIN1  <--- ----->ZAT2 ------->GAMYB          --------->GLK1(1)          ---------->DOF2<---------ZAT18     ==== ------ZAT2 <---------ALFIN1       <---------GLK1(1)    <---------WRKY38(1) --------->ANAC58    ----- ------At4g35610 <---------CCA1(2)<---------ARR14(2)    <---------WRKY12    --------->ANAC58    <---- -TEIL  <---------ATHB12          --------->ARR14(2)  <-----------HVH21    --------->At4g35610  <---- ----HVH21 <---------MYB55(2) <---------MYB52(1)<---------ZAT14         --------->ZAT2--------->ATERF1(2) ->ARR14(2)--------->MYB46(3)<-----------HVH21 <-----------HVH21        <---------ZAT2<---------ATERF1(2)   gctcgttccaataaccaccgtatcgtttctccgtcggatttgtgaccaagttcacgggtcaattgaaagacccgagcagcgcaacccgccggcattcgga  21112600          ---------->ID1        --------->TOE1(1)        --------->TOE2(1)   ------>NtERF2  ----------->HVH21  --------->DEAR3(1) ------->TOE1(2)          ----------->HVH21              --------->ATERF1(1) ===================HOX2a_HOX2a                          <------NtERF2              --------->MYB52(1) ----->ZmHOX2a(1)         xxxxxxxxxxxxxxxx>smallRNA(i)  ------>NtERF2             --------->ARR14(2) --->ZmHOX2a(2)       <---------ANAC58                 <---------ARR14(2)         <---------ARR14(2) ---ZmHOX2a(2)        <---------ANAC58                 --------->ARR14(2)     <------NtERF2 ===================HOX2a_HOX2a             <---------DEAR3(2)             --------->ZAT2 ---->ARR14(2)        <---------ANAC46      <------MYB83<---------ZAT2     --------->At4g35610 -----GLK1(2)------>ZmHOX2a(1)              <------MYB46(1)              --------->DEAR3(1) -----ARR14(2)     <----------DOF2<----------DOF2  <---------LBD16      <---------LBD16--------->ANAC46   tcctccgacctcgtccttctactttcgtgtgacggtctttagaagtcggtctcttcggagccggtttagtcttcaccggctgcaaatacccgtcttcttg  21112700                              --------->ARR14(2)                              <---------ARR14(2)              <---------ANAC46                           ----------------->AGL1             <---------ANAC58                          <---------LBD16                     <---------ANAC58                       <<<<<<<<<MYB2                         --------->MYB52(2)                     <------MYB83                           <-----------GT1        -------------->OsCBT                     <------MYB46(1)                      <-------GAMYB            <---------ANAC58                    <---------AtMYB61                    <---------MYB46(3)        <---------ANAC58                    --------->MYB59                     <--------P            <---------CCA1(2)                  <---------MYB52(1)                 --------->ICU4    <---------ATHB12              <---------LBD16 <---------GLK1(2)  <-----------HVH21   --------->WOX13(1) <---------ANAC58             <-----------------AGL1 <-----------HVH21<---------YAB1--------->WRKY18(1)  <---------ANAC58   tttcatgagcatcatacccggtttggttttcggattcgggtcagacagatgggtcatggttgttacttggtcaatcacttgtatcgcgttgccttcgtga  21112800                            --------->ARR14(2)                            <---------ARR11(3)                            --------->ARR11(3)                            --------->GLK1(2)                            <---------ARR14(2)                           --------->RVE1(1)                           <---------GLK1(1)                                       ----------->GT1                         <---------GLK1(2)                                      --------->CCA1(2)              --------->ANAC46                          <---------At4g35610    --------->ARR11(3)          <---------At5g28300       <-----------HVH21   --------->At4g35610   <------ZmHOX2a(1)   ttcgattccatttaccacaaaaccctagaatatctgaatgtcacaaaacttcaaaatcagccgaagaattgattcaagtaggatatagtcaaaatgttta  21112900                                                                                                    -                                                                                                 ----                                                                                      --------->GLK1(1)                                                                                      <---------GLK1(1)                                                                                     <---------ARR14(2)                                                         ---------->DOF2     --------->DAG2     <----                <---------TOE2(3)               <---------WOX13(1)          ---------->DOF2   -------       <---------GLK1(2)                       <------------CBF    ----------->GT1   --------->ARR14(2)  <-----------GT1           *TSS         ----------->HVH21   <<<<<<<<<<<<<<<<<LFY   <------ZmHOX2a(1)   gtttttactgattcttttgacgaaaaatgttatctgtttgaatttgacagattgaaaactaaagaacagtggataaaaaaaagtgaggaaaccctacaaa  21113000                         --------->At4g35610                         --------->ZAT2                         <---------At4g35610--------->ANAC58         --------->AHL20(2)                 --------->ANAC46        <---------AHL20(1)               <---------ZAT14                                           --        --------->AHL20(1)               --------->ZAT14                           <------ZmHOX2a(2)        <---------AHL20(2)            ------>ZmHOX2a(1)                           <---------ARR11(3)        --------->AHL20(2)<---------MYB52(2)--------->ANAC58                      --------->ARR11(3) ---------->GT1      --------->AtMYB61--------->At4g35610                --------->PCF2          ---- ------->GT1 --------->AHL20(2)--------->TOE1(3)                         ------>NtERF2           <--- -----TOE2(3)<---------AHL20(2)<---------DAG2                            <---------PCF5        <----- --->DOF2<---------AHL20(2)    --------->TOE2(3)         ---------->DOF2 <---------TCP11(2)  <-------   ggtagaaaaataaaattaaaaaaccacagctaaccttatcctctgcacgaagaaccctacaaagatggaagaaggggccctcaagatcatcgtttttatt  21113100                               <------ZmHOX2a(2)                        <---------ANAC58                              <---------ARR11(3)                        <---------ANAC58 ------->AHL20(2)          <---------HSFB2a(2)                   --------->MYB52(1)   --------->ANAC46 ----->AHL20(2)            --------->HSFB2a(2)               --------->MYB52(1)       --------->bZIP60(2) ------AHL20(2)        ------->GAMYB                       <---------MYB59          <---------ALFIN1 ----YAB1           --------->MYB52(1)                    --------->At4g35610       --------->AtMYB61 --AHL20(2)       <---------ATHB12                        <---------At4g35610  <------NtERF2        <   tttatatagtcccattacaaatcaacggtctagatcacatacttcatatgggcctgttttagctaactaatgggccttggcctcgaccacatcacaagag  21113200                                                                                 ------->GAMYB                                                                                 <---------MYB59                                                                               --------->MYB52(1)                                                                               ------>MYB83                                                                               ------>MYB46(1)                                                                               -------->P                                                                              --------->MYB52(1)                <---------AHL20(2)                                            --------->MYB55(1)               <---------AHL20(2)                                            --------->AtMYB61               <---------AHL20(1)                                           --------->MYB46(3)               --------->AHL20(2)                                         ------>MYB46(1)         <---------At4g35610                                              ------>MYB83     --------->ALFIN1         --------->YAB1                            --------->AtMYB61   <---------ANAC46      <---------AHL20(2)                             <---------MYB59      -------- -----------RAV1(1)      <---------YAB1                             --------->ZAT18    <----------ID1   tcatgttgtggagctaatttttttttttttattgatagttgtacagttgaaccggtttccatttaagaagtgaaccaaaccaaccgaattggacaaaacc  21113300                                                                    <-------TEIL                                                            --------->At4g35610                                                         --------->ZAT18                  --------->ANAC58                                                         --------->ZAT14                  --------->ANAC58                                                         <---------ZAT18          -------->ATHB1                                                         <---------ZAT14          --------->ATHB51           <---------ZAT18                              --------->ALFIN1          --------->ATHB12  -   --------->ICU4                            <---------YAB1 <---------At4g35610  <---------YAB1     < ->MYB52(1)--------->ZAT18     --------->TOE2(3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  -----------   gagccataactagggcaatacaaaacttagctatctcaaaactgagtactattgacaagtgcagcttatgttcatttctgagtattattgacaagtaaaa  21113400  Previous    Next  AGI:  At5g51910.1    Description:  TCP family transcription factor, putative. similar to TCP family transcription factor, putative [Arabidopsis thaliana] (TAIR:AT2G45680.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24459.1); contains InterPro domain Transcription factor, TCP (InterPro:IPR005333) Range:  from: 21111773    to: 21112928    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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