Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->ZAT14                                                                             --------->ZAT18                                                                             <---------ZAT14                          <------ZmHOX2a(1)                                  <---------SPL7                      <---------TOE1(1)                                      <---------SPL1(2)                      <---------TOE2(1)                                    --------------->AtSPL3                     --------->SPL7                                      <-----------GT1                   <---------SPL7                                <---------ANAC55(2)                 --------->ANAC46                                --------->ANAC46                 --------->ANAC58                                ----------->GT1                 --------->ANAC58 <----------DOF2                --------->ANAC58                   -                 --------->ANAC55(1)       <----------DOF2       --------->ANAC58                   -            --------->ANAC58     <---------DAG2                  --------->ANAC55(1) <---------ARR11(3)            --------->ANAC58  --------->ANAC58                   --------->ANAC55(2) --------->ARR11(3)            --------->ANAC46  --------->ANAC58                <------ZmHOX2a(2)--------->SPL7  <-----   gattacatcggcacaagacacggtacgaggacaagccttttcgagctttctcttagcatcttcgatcacgtaaaatgaccgtactgagatgtttggagga  21109200                             <---------ARR11(1)                             --------->ARR14(2)                        <-----------HVH21                   <---------At5g28300                  <---------WRKY18(1)                 --------->WRKY38(1)                 --------->WRKY12         <---------ZAT2 --------->REM1(2)         --------->ZAT2--------->ALFIN1                                <---------MYB59         --------->At4g35610 <---------ARR14(2)                        --------->TOE2(3)         <---------At4g35610 --------->GLK1(2)             --------->REM1(1)   ------>ZmHOX2a(1)-------->ZAP1           --------->ANAC46         ------>MYB83 ----->MYB46(1)  ----------->HVH21          --------->ANAC58         ------>MYB46(1) ----->MYB83 <------MYB83    ------->TEIL   --------->ANAC58  --------->MYB46(3) -ZmHOX2a(1) <------MYB46(1)<---------ARR14(1) <-----------HVH21     -------->P                  <---   ccatccttctcagcttggtttgaccgtgtcgaatctagtagaatggacgcatcacatccctacaacaatccaaccttactcaaaactcaacttcatatat  21109300                                                                      --------->KAN4(2)                                                                     <---------HSFB2a(1)                                                                     --------->KAN4(1)           <---------ATHB12                                          <---------KAN4(1)              <          --------->ANAC58                                           --------->HSFB2a(1)     <-------          --------->ANAC58      <------ZmHOX2a(2)           <---------LBD16   =======================         --------->WOX13(1)    <---------ARR11(3)         <---------ATHB12    <------ZmHOX2a(1)<-----        --------->MYB46(3)     --------->ARR11(3)    --------->ANAC58<---------HSFC1(2) --------->ANAC58    <------ZmHOX2a(2)   ---------->DOF2<-------TEIL  --------->ANAC58--------->HSFC1(2) --------->ANAC58 --------GT1           --------->AHL20(2)         <---------REM1(1) <---------KAN4(2)--------->ZAT2 =   aactggatcaacaatcaactatcaaataaagaagatcaagatgcataccctgatgaagcaatcgtggaagaacattcttaggagacgagcaggcactttg  21109400                                                           <---------WOX13(1)                                                         --------->ATHB12                                                        --------->ANAC58                                                        --------->ANAC58                                                        <---------YAB1                                                     <---------ZAT18                                                   --------->ANAC58                                                   --------->ANAC58                                                --------->ZAT2      ---------->DOF2                           <---------At4g35610                       --------->At4g35610 ------ZmHOX2a(2)   --------->MYB52(1)          <---------ZAT2 <---------YAB1           <---------GLK1(2) ---DOF2           ------>ZmHOX2a(1)         <---------At4g35610                       --------->At4g35610 ======HOX2a_HOX2a<---------MYB59 <---------YAB1--------->At4g35610      --------->YAB1<---------At4g35610 ----------------WRI1           --------->YAB1 ----------->RAV1(1)      --------->ICU4 --------->HSFC1(2) =========================HOX2a_HOX2a        --------->At4g35610--------->YAB1         <---------HSFC1(2)   ggatcatacaaagtagcattcctaacagtttcaagtatgattttttcagcagcagggcacgattgatcatagtaatgagcatcaagagcagcttctgagg  21109500                                                               --------->YAB1                                                              <---------TOE1(3)                                                              <---------YAB1                        <---------YAB1                        <---------TOE2(3)             <--------                       <---------ARR11(3)                  <---------AHL20(2)          --------->ANAC58                       --------->ARR11(3)               <---------------AGL15          --------->ANAC58                      --------->YAB1           --------->HSFC1(1)                     --------->DAG2                 --------->LBD16 --------->ICU4--------->HSFB2a(2)                   ---------->DOF2                --------->RAP2.6(2)            <---------HSFB2a(2)               <------NtERF2<------   gcttaactatcgctaaaaccgcaaatatcatcgcaaaaatgagtcccttcgagaatgccattttatggtaatgtgttttgggcctcgaaaagcactcttt  21109600                                                   <---------ANAC46                            --------->YAB1         <---------ANAC58                 --------->ARR14(2)      ------>NtERF2                               --------->HSFB2a(2)                 <---------ARR14(2)   --------->LBD16        <------ZmHOX2a(1)       <---------HSFB2a(2) <---------HSFB2a(2)   <---------YAB1--------->ALFIN1  ----------->TBP               <---------HSFC1(1) -DAG2          <------ZmHOX2a(1)---------->DOF2   <---------ANAC58--------->CCA1(2) --------->HSFC1(1) ----DOF2     <---------TOE2(3)*TSS  <---------ANAC46<-----------TBP      ----------->GT1        ----   gttcttgaagttgtttgaggatttgatgaatgagaagaagcggggactatttggcttatataaggagagaaatgagaggctaatattctagaaaatgtgt  21109700                               <---------AHL20(2)                               --------->ATHB51                               --------->AHL20(2)                               --------->ATHB12                              --------->AHL20(2)                              <---------AHL20(1)                  <---------TOE1(3)              ------->TEIL                  <---------TOE2(3)     <---------MYB52(2)                 ---------->DOF2        --------->MYB46(3)             <----------DOF2 --->TEIL     <----------DOF2 <---------AHL20(2)<---------CCA1(2)  <---------GLK1(2)       <---------   atgtgtataacatatgctttaaagttactcaaattatttggaacaaacatgtatctattccagtattcaaattcttttctccctaaaatcgtactttgag  21109800                                     --------------->AGL15                                     <---------------AGL15                                    <-----------------AGL3         <---------AHL20(2)                                    <-----------------AGL2  --------->GLK1(2)                                    ==============================MADS_MADS                        --------->At4g35610       <---------------AGL15                        --------->ZAT2           <-----------------AGL3                   <---------At4g35610           --------->ICU4   --------->YAB1                 <---                <---------ZAT18   --------->ARR14(2)       <---------GLK1(2)                    <----                --------->ZAT18   <---------ARR14(2)   ---------->DOF2                          -----            <-----------RAV1(1)   --------->GLK1(2)   <---------AHL20(2)                    ---------          <----------DOF2        <---------GLK1(2)--------------->AGL15                --------->AHL20(2)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  ==================================================== -DOF2  ------->TEIL   --------->ARR11(3)        ----------------->AGL3              --------->AHL20(2)   tctaagcatgtactttggtgcagaagagctggacagaatctgtttttggtaactattaaaagaatctattaaaacgttttttaaaatttttatataaaat  21109900                                 <---------ARR11(3)                                 --------->AHL20(1)                                             -----                                 --------->ARR11(3)                                             -----                 <---------AHL20(2)                                                        <---------AHL20(2)            <---------YAB1       <---------AHL20(1)                                       --------->YAB1          ----------->GT1   --------->AHL20(2)                                        <---------AHL20(2)   ------->TEIL  --------->AHL20(2)          --------->TOE2(3)                     <---------AHL20(2) ------AHL20(2) --------->AHL20(2)         <-------TEIL --------->TOE1(2)          --------->AHL20(2) -----AHL20(2)  <---------AHL20(2)         <-----------------AGL3                 --------->AHL20(2) ---->AHL20(2)  --------->YAB1  <---------AHL20(2)      <---------LBD16           <---------AHL20(1) >AHL20(2)--------->YAB1<-----------GT1   --------->CCA1(2)                       <---------AHL20(2) ============================================================MADS_MADS <----------DOF2--------->AHL20(2)   aaatggatgttattgtaattaaaattttacttaaatatttttagatacattaatggaacctggaagtaattttctttaactcaattaatttataaaaatt  21110000                                                         --------------->AGL15                                                         <---------------AGL15                                                        <-----------------AGL2                                                        ----------------->AGL2                                                        ----------------->AGL1                                                        ----------------->AGL3                                                        <-----------------AGL1                                                        <-----------------AGL3                                              --------->YAB1                                             XXXXXXXXXXXXXXXXXXXX>MIR172A/B                        <-                                            XXXXXXXXXXXXXXXXXXXX>MIR172C/D                        ---                                            --------->GLK1(2)     ---------->DOF2              <-----                                            --------->ARR11(3)   <------ZmHOX2a(1)             <-----                                           <---------GLK1(2)   <---------TOE2(3)         <---------LBD16                              <---------AHL20(1)        <-----------------AG           <---------ARR14(2)                              --------->AHL20(1)        <------NtERF2                  --------->ARR14(2)                           --------->AHL20(2)XXXXXXXXXXXXXXXXXXXX>MIR172E --------->ANAC58    ------- ------>GT1        --------->O2   ----------->GT1       ----------------->AG--------->MYB52(1)<------ ---->YAB1    <-----------GT1 --------->ARR11(3)       ------>NtERF2      --------->ANAC58<---------ANAC55(2)   gtaatttgtttttgttttgccacttgaaaaaaaatattgtaaatagaatcttgatggtgccaaataaggaaagaacacgaacggtttagaatacggatgg  21110100  Previous    Next  AGI:  At5g51890.1    Description:  peroxidase. Identical to Peroxidase 66 precursor (PER66) [Arabidopsis Thaliana] (GB:Q9LT91;GB:P93727); similar to peroxidase 64 (PER64) (P64) (PRXR4) [Arabidopsis thaliana] (TAIR:AT5G42180.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64852.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42779.1); contains InterPro domain Plant peroxidase; (InterPro:IPR000823); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016) Range:  from: 21108218    to: 21109631    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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