Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                       <----------DOF2    --------->ZAT14                                ------>ZmHOX2a(1)                              <--    <---------ZAT14                             <-----------GT1                                  <--- ------GLK1(2)                          --------->GLK1(2)                                  <--------- -----At4g35610                        <---------GLK1(2)                           --------->KAN4(1) ---->At4g35610         --------->At4g35610 <---------DAG2<---------AtLEC2    ----------->GT1   <---- -----ZAT2              <---------At4g35610 <----------DOF2              <---------YAB1  ------>ZmHOX2a(1) ---HVH21 ----------->HVH21      ------->GAMYB  ---------->ID1    <----------DOF2  <---------KAN4(1)   cttctgtgcaatgtgacctcgtcttcatcagacaacacacagattcctttttcctcttttacatggttctttgttatgtttagtaatattcctcttttct  21106200                                                                                     <---------YAB1   <---------ZAT6                                                                  ----------->GT1 <---------ANAC46                                          <---------YAB1    >>>>>>>>>RAP2.2 <---------ANAC58                                         >>>>>>>>>>>>>>>>>LFY     --------->YAB1 <---------ANAC58                                        <-----------GT1   <---------ARR11(3) -------MYB52(1)                                      --------->GLK1(1)    --------->ARR11(3) ----GAMYB           ---------->DOF2            --------->DAG2            --------->CCA1(1) -DOF2            --------->YAB1               ---------->DOF2        ------>ZmHOX2a(1)   --------->DAG2 -------RAV1(1)  <---------YAB1        --------->YAB1 <---------GLK1(1)   --------->RVE1(1)   gttgagtgttgaaagaaatatgataaagagtatgtgtctaaacataacaaaaagggaattcaccattgtgtcctaaatatctaaatcgtgataagggaat  21106300                                                                        --------->ANAC58                              --------->ALFIN1                          --------->ANAC58                            <---------MYB46(3)                      ------>ZmHOX2a(2)                            <---------ANAC58                      <---------ARR11(3)                            <---------ANAC58           <----------DOF2 --------->SPL7             ---        <----------DOF2 <---------AtMYB61  <---------YAB1   <-----------GT1       <----------DOF2 ---   atgaattcttctttctccattttgttttggtcgtgggacttgatcaacattgattttcttttatactagatcgtaagtcatgttctttttgttttttgct  21106400                                                                                        <---------AHL20(2)                                                                                        <---------YAB1             <----------DOF2                                                            --------->AHL20(2)             <---------DAG2                                                            --------->AHL20(2)         ------>MYB46(1)                                                           --------->AHL20(2)         ------>MYB83            ---------->DOF2                           <-----------HVH21    <----        --------->MYB52(1)    <---------ANAC55(2)                         <------MYB46(1)--------->ATHB12       --------->AtMYB61      --------->AtLEC2       ---------->DOF2      <------MYB83 <---------AHL20(2)      --------->MYB46(3)  <---------RAP2.6(3)   ------>ZmHOX2a(2)        <---------MYB46(3)     <---- ------>ANAC58     <----------DOF2            <---------ARR11(3)         --------->MYB59--------->AHL20(1) ------>ANAC58  <---------ARR11(3)        --------->YAB1    <---------ALFIN1       <---------AHL20(2)   aagccaaaaccaacgctttatcttttgcagtcatgtaaagtcaaacatgatccataaaagaaacacccttgtagttgggtcatatataattttattgggc  21106500                                      --------->MYB59                                   <------------CBF                                  -------->HAHB4                                  <---------ICU4                                  <--------ATHB1                                  --------->ATHB51                                  --------->ATHB12                                    --------->ICU4                                 --------->ICU4                                    ---------->ID1                                 <---------ATHB51                            <---------AHL20(2)                                 <---------AHL20(2)                         <---------AHL20(1)                 <----------DOF2 <---------YAB1                             --------->AHL20(1)           --------->ALFIN1    --------->YAB1              <----------DOF2 <---------AHL20(2)           <--------P         --------->AHL20(2)         ---------->ID1  --------->AHL20(2)    --------->CCA1(2) --------->MYB46(3)                <-----------GT1 --------->AHL20(1) -----ANAC58 <------MYB83------------>CBF          --------->ATHB12     <---------AHL20(1)      <---- -----ANAC58 <------MYB46(1)  <---------AHL20(2)  --------->ICU4       --------->AHL20(2)      ------   ttgaatatacaaggttgggctttaacaaacaattaataattgggtcttgagaatgatttttctttttgtcaaaatatatatatttgtcattttgaattta  21106600            --------->YAB1         <---------ICU4         --------->YAB1         -------->ATHB1         *TSS        <---------AHL20(2)                   --------->GLK1(2)        --------->AHL20(2)                   --------->ARR14(2)        <---------ATHB51                     ------->TEIL        --------->ICU4                       <---------ARR14(2)              ---------->DOF2     <---------AHL20(1)                     <---------GLK1(2)               <---------GLK1(2)     --------->AHL20(1)          <---------AHL20(2)                         --------->ARR14(2)     <---------AHL20(2)         <---------AHL20(1)  ------>ZmHOX2a(2)       <---------ARR14(2)     --------->AHL20(2)         --------->AHL20(1)  ================HOX2a_HOX2a--------->ANAC58    <---------AHL20(2)          --------->AHL20(2)<---------ARR11(3)      --------->LBD16    --------->AHL20(2) --------->AHL20(2)--------->LBD16        ------>ZmHOX2a(1)  --------->YAB1     ------->TEIL--------->AHL20(2) ===================HOX2a_HOX2a -------GT1<---------YAB1<-----------GT1<---------LBD16      ------>ZmHOX2a(1) --------->ANAC58 --->AHL20(2) <---------YAB1    <---------AHL20(2)--------->ARR11(3) --------->GLK1(1)     <---------   actaaaataaattattataaatgaatttaacaaatttaatttccctgaatctgatcttaaatcctcctcagaaacccagaaacgcgaagatgggagacaa  21106700                                                                    --------->ARR11(3)                                                                    <---------ARR11(3)                       <------ZmHOX2a(2)                          <---------YAB1                      <---------ARR11(3)                        --------->YAB1                  ---------->DOF2                               <---------ICU4         <---------AHL20(2)                                   --------->GLK1(2)                ------         --------->AHL20(2)                            --------->TOE2(3)        <---------MYB52(1)         --------->AHL20(1)           ------->TEIL  <---------CCA1(2) =========================HOX2a_HOX2a   --------->GLK1(2)  --------->ARR11(3)--------->TOE2(3)    --------->YAB1    --------->At5g28300--- -ARF1   <---------AHL20(1)          <---------CCA1(2) --------->YAB1 ------>ZmHOX2a(2) ------>ZmHOX2a(1)   tggagaatcaataaaatggccaaagatcaaactcaagtcgaatctcaatgtctcttatcttaagaatcatgatctcttcaccgtaagttcctcccaaaaa  21106800                                                                                       ------>ZmHOX2a(1)                                                                                   --------->ARR11(3)                                                                            ------>ZmHOX2a(1)                                                                            --------->LBD16                                                                          <---------LBD16                                          <---------WOX13(1)          <---------HSFB2a(1)         ---                                        ------>MYB46(1)               --------->HSFC1(2)        -----                                        ------>MYB83              --------->LBD16  <---------ARR11(3)                  <-----------GT1     <---------MYB59            --------->HSFB2a(2)  --------->TOE2(3)   -------->P <---------ICU4--------->AHL20(2)                   <---------HSFB2a(2)  --------->TOE1(3) --------->MYB46(3)   --------->LBD16 --------->TOE2(3)       --------->AtMYB61   --------->RVE1(1) --->YAB1    <---------YAB1 <---------AHL20(2)      <---------TOE1(3) <---------HSFC1(2)        ----- ------>YAB1 --------->ICU4--------->AHL20(2)       <---------TOE2(3) --------->HSFB2a(1)       -----   tcatcaacccatttcattattttccccaattttattctaacctaattgaaatttagggtttacacctccagaaatttcctgaaaaaatccttaataccaa  21106900                                                                                              -------                                                                                              -------                                   <---------ANAC58                                           -------         --------->ICU4            <---------ANAC58                                         ---------    ----------->GT1        --------->MYB52(1)                                              <---------WRKY12 ------>AHL20(2)       --------------->AGL15                                               <---------WRKY45 ---->ANAC58          <-----------------AGL2     <---------AHL20(2)     <---------DAG2     <---------WRKY38(1) ------>GT1           <-----------------AGL3 <---------ANAC55(2)        <----------DOF2   --------->WRKY18(1) ---->ANAC58<-------TEIL   <-----------GT1 --------->AHL20(2)   <---------AHL20(2)       <-----------HVH21   gtaaatttgtaatattcatcgatttctattaacgggttcttgtaattacatatatttgaaatcaaatttatgagctttatctctgtatataggtcaaagc  21107000     ----------->GT1   <---------ANAC58   <---------ANAC58                                                <-------GAMYB -->ANAC58                   <---------ANAC58      <-----------GT1<-----------RAV1(1) -->ANAC46                   <---------ANAC58 ----------->GT1  <-----------GT1              <-------- -->ANAC58         <-----------GT1        ---------->DOF2  <---------AHL20(2)              <--------- ->DOF2         --------->MYB59      ----------->GT1 --------->ANAC55(2)             ----------->GT1   catgagcttgtgaattgttagataccattttgcttcgaatcgtttaaagggttttacttattttttttctgttgaatttgatttgagaggtttttaactt  21107100  Previous    Next  AGI:  At5g51880.1    Description:  oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors. similar to unnamed protein product [Vitis vinifera] (GB:CAO17704.1); contains InterPro domain Prolyl 4-hydroxylase, alpha subunit; (InterPro:IPR006620) Range:  from: 21106609    to: 21108167    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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