Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------ANAC58                                  <---------ANAC58                               <-------MYC2                               ------->MYC3                               ------->MYC2                               <-------PIF5                                             --------->HSFB2a(2)                               <-------MYC3                                             <---------HSFB2a(2)                               ------->PIF5                                       --------->AHL20(2)                   --------->ANAC46<----------DOF2                                <---------AHL20(2) ----DAG2 --------->TOE2(3) <---------ANAC58                --------->ICU4 <---------ANAC58 -----DOF2--------->TOE1(3) <---------ANAC58           ----------->GT1     <---------ANAC58     -----   tttttctgaaaaccctaatacaatccacttgctcgtgcttgaagaaactctcttaagtagtaaaaattcttaagtttgcttaaataaaatccagaagcta  21104700                                     --------->ANAC58                                     --------->ANAC58                                   <---------bZIP60(2)                                     <---------ARR11(1)                                ----------->HVH21                                          <---------ARR14(2)                         --------->YAB1                                                    --------->ARR14(2)                   --------------->AGL15                                                   <---------ARR11(3)                   <---------------AGL15                                              ------>NtERF2                  ----------------->AGL2                                         --------->DAG2                  <-----------------AGL2                         --------->STY1(2)   <---------PCF5                  <-----------------AGL3                   <------ZmHOX2a(1)   ---------->DOF2<------          --------->TOE2(3)   ----------->GT1      ---------->DOF2         ---------->DOF2<---------CCA1(2) ---------->AtSPL8----------------->AGL3   <-----------RAV1(1)   <---------STY1(2)   <----------ID1   agtacttacaaaacttaaattctaaaattagaatgtgacaaggcattgttgggcaaagtcaggaactagctagcaccaaaagaaagggggccaaatcttt  21104800                                                                         --------->ARR14(2)                                                        <-----------GT1  <---------ARR14(2)                                           --------->AHL20(1)            <---------GLK1(2)                                           --------->ARR11(3)            <---------ARR11(3)                 --------->GLK1(2)         --------->AHL20(2)         <---------HSFB2a(2)                 --------->ARR11(3)        <---------AHL20(1)         >>>>>>>ZML2--------->MYB46(3)        --------->ATHB12                   <---------ARR11(3)         --------->HSFC1(1)        --------->ATHB51                  --------->CCA1(2)           --------->HSFB2a(2)       <---------AHL20(2)                <---------ARR11(3) --------->ZAT14 --------->ANAC58       <---------YAB1            <-----------GT1 <-----------GT1   --------->ARR11(3)      --------->ALFIN1 ----DOF2        <---------ARR11(3)      --------->ARR11(3) <---------ZAT14 --------->ANAC58   agcgcctatattattgcaaaatctctagtacgatttaaccagagatatattatactattcactacagaagttctagatactcaacaaatctatgtgtagc  21104900                                                         --------->ARR11(3)                                         <---------AHL20(2)                                         --------->AHL20(1)                                         --------->AHL20(2)                                        --------->AHL20(2)                               --------->ARR11(3)        <---------ARR11(3)                               <---------AHL20(1)        <-----------ARR10      <---------ANAC46                               --------->AHL20(1)        <---------ARR14(2)     <---------ANAC58                              <---------AHL20(2)        --------->RVE1(1)       <---------ANAC58                       <-------MYC3     --------->ICU4<---------GLK1(2)      --------->ARR14(2)      <---------GLK1(2)------->MYC3     <---------AHL20(2)           --------->At4g35610      <---------ARR11(3)     --------->ICU4     <---------YAB1       <---------ZAT2          <-------      --------->ARR11(3)----------->GT1 <---------ATHB51--------->CCA1(1)    <---------ARR14(2)   tagagaaagattttggaaatagacatgtgtaaatattttgaaataatttgatgaaagaatatcttactgggagctagagtattcgtgtaatcttccgctc  21105000               <---------At4g35610               --------->ATERF1(1)               <------NtERF2              <<<<<<<<<AtERF-2              <<<<<<<<<AtERF-5              <---------ERF1              <<<<<<<<<AtERF-1              <<<<<<<<<AtERF-3              <---------MYB46(3)              ------>NtERF2                                                                       <--              <---------ATERF1(1)                                                                 <--              <<<<<<<<<AtERF-4                                                             <---------ANAC58              <---------RAP2.3(1)                                                          <---------ANAC58             <---------ANAC46                                                              <---------bZIP60(2)             <---------RAP2.3(3)                                                           <---------ANAC46             <---------RAP2.3(2)                                                        ----------->HVH21             <---------RAP2.6(2)                                                 <---------HSFB2a(2)             <---------DEAR3(1)                                                  --------->HSFC1(1)     <<<<<<<<<<<<<<<<<LFY                          ------->TEIL                  <---------HSFC1(1)  ---------->DOF2                          <---------At4g35610                   --------->HSFB2a(2) --At4g35610--------->RAP2.6(3)         ---------->DOF2               <----------DOF2 <---------ANAC55(2)   tgagaaaagacaatggcggctacttgagcatcgcatagaaccgaaagctcatgagccttcttaaatagaccgcttcttcgcttcgagaacgtgacttgtc  21105100                               ============================HOX2a_HOX2a                               ------>ZmHOX2a(2)                             --------->ARR14(2)                                                     -                             <---------ARR11(3)                                                    <-                             <---------ARR14(2)              <---------ICU4                        --      --------->ANAC55(2)    --------->ARR11(3)     ------>ZmHOX2a(1)                  --------->TOE1(3)  <-----------HVH21      ------>ZmHOX2a(2)         --------->TOE2(2)            <---------WOX13(1)<-- --------->ANAC46        ==================================HOX2a_HOX2a         <------------CBF ----- -------ZAT2           --------->ARR11(3)          --------->TOE1(2)       <---------At4g35610  <---- -------At4g35610      <---------ARR11(3) <---------YAB1    <-------TEIL<-------TEIL   --------->TOE2(3)   tgctcgtcacgttctcaatcttcttgatctcgatcttccctctcaccattgttcctgcgatattcattccaagattcatcagattgaaaccctaactaaa  21105200                                        <---------ANAC58          --------->ANAC58    ----------->GT1                     <---------ANAC58          --------->ANAC58 -------->LBD16                         <---------ANAC46          --------->ANAC46 --------HSFB2a(2)                 <---------ICU4               ---------->DOF2 ------->HSFB2a(2)                 --------->ATHB12         --------->GLK1(1)      --------->YAB1 -------LBD16                     --------->ICU4        <------ZmHOX2a(1)         <---------YAB1 ---->ARR14(2)               --------->ANAC58     --------->HSFB2a(2)           --------->YAB1   ---- -----ARR14(2)               --------->ANAC58     <---------HSFB2a(2)        ---------->DOF2    <----   tccggaaggaaattttcactcagacaaaatcaagaaatgatttcttgaaaatcgagaaggagatttcaaagccagaagtcaaagatgataacttgaataa  21105300                                                                                       --------->DREB2C(2)                                                                                       --------->At1g77200                                                                                       ------->GAMYB                                                                                      --------->MYB46(3)                                                                                      --------->DEAR3(2)                                                                                  <---------ATHB12                          <---------ARR14(2)                                     --------->ANAC58               --------->CCA1(2)                                              ------------>CBF               <------ZmHOX2a(2)                                            --------->ANAC58              <---------ARR14(2)                                            --------->ANAC58              --------->ARR11(3)                --------->ANAC58           --------->SPL7      ------          <---------At4g35610         <-------TEIL  <-------TEIL        <---------HSFB2a(2)  -------- --------->ANAC58         --------->ARR14(2)    --------->ANAC58        --------->HSFB2a(2)---------- --------->ANAC58         <---------GLK1(2)   ---------->DOF2        <-----------GT1--------->MYB52(1) ------->GT1  --------->ARR14(2)    <---------GLK1(2)            <---------DAG2  --------->ANAC58 -----TOE2(3) <---------ARR11(3)    --------->ARR14(2)           <----------DOF2--------->WOX13(1)   tgtaagaaactcagaagatccaaaaccagatttgtctagattcacttcaaaagctacatagaacatacttttttccagacgacaatcaaccgacaaagtt  21105400                                                  <---------AHL20(2)                                                 <---------AHL20(1)                                                 --------->AHL20(1)                                                 --------->ARR11(3)                                                 --------->AHL20(2)                       -----------                                                 <---------ARR11(3)                    -------->HAHB4                                                 <---------AHL20(2)                    --------->YAB1                                                --------->AHL20(2)                     <---------ICU4                                              --------->AHL20(2)                 --------->TOE1(3)                                            --------->AHL20(2)          <----------ID1<---------ATHB51 --->AHL20(2)                           --------->ANAC58            ---------->DOF2   --------->ICU4 --->GT1     ----------->GT1            ----------->GT1        ---------->DOF2   --------->TOE2(3) >DOF2       <---------ANAC46           --------->ANAC58   ---------->DOF2   ---------->DOF2    -----   aatagttttagagaggggtataatttgcacatcttaactatcaagaaaaaatatatttgcacaaagaaagaaaaggaacaaaagcttaataatggtgaaa  21105500                                                  --------->YAB1                                                 <---------YAB1                                               --------->YAB1                                              <---------YAB1                                          ------>ZmHOX2a(2)                                         <------ZmHOX2a(2)                       ---------->DOF2  <---------ARR11(3)                     --------->LBD16    <---------AGP1                    <---------HSFB2a(2) --------->ARR14(2)                                     ------                    --------->HSFB2a(2) --------->ARR11(3)                                    <------                    <---------ANAC46    --------->AGP1                                      ---------                   <---------LBD16      <---------ARR14(2)                               --------->PCF2 >GT1    <<<<<<<ZML2<---------ANAC55(2)<---------CCA1(2)                       <----------DOF2<------ ----->DOF2      --------->GLK1(2) --------->At4g35610           <-----------GT1        <------ZmHOX2a(1)   aagaaaccctagaactaaaattccggaaagaggcatgagctagatcttatgatgataaactctgtgtttacctctgtgcctctttgtacaggagccacaa  21105600  Previous    Next  AGI:  At5g51870.1    Description:  AGL71; transcription factor. similar to MADS-box protein (AGL72) [Arabidopsis thaliana] (TAIR:AT5G51860.2); similar to MADS-box protein (AGL72) [Arabidopsis thaliana] (TAIR:AT5G51860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17703.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) Range:  from: 21102861    to: 21105149    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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