Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        ================================bZIP_DOF                      ================================bZIP_DOF                      <---------O2                      --------->TGA1a                      <---------TGA1a                      --------->O2                  ------>NtERF2               --------->ZAT2               <---------ZAT2                                                                 <------               --------->At4g35610                                                            <------          <------ZmHOX2a(2)                                                                   <------          <---------YAB1                                                                   ----------         <-----------ARR10                                                  ------>ZmHOX2a(1) <------         --------->ARR11(3)                           ------->TEIL    <---------ALFIN1   <---------ANAC55(2)         <---------ARR11(3)                   <---------At4g35610     --------->AtMYB61  --------->ANAC55(2) ------DOF2    <---------At4g35610         ---------->DOF2    ---------->DOF2       --------->HSFB2a(2)   ttctgagagaagatcatagctgccacttgagcatcacatagaacagaaagctcatgagccttcttaaagagaccactccttcgcttcgaaaacgtgactt  21101300                                        ------>ZmHOX2a(1)                     <---------GLK1(2)                                   <----------DOF2                            --------->ARR14(2)       <-----------GT1            =============HOX2a_HOX2a                    <---------ARR14(2)     <-----------HVH21            ===================================HOX2a_HOX2a ---ANAC46                        ------>ZmHOX2a(2)                     ------>MYB46(1) ---bZIP60(2)                     --------->HSFB2a(1)                  --------->WOX13(1)          -- ---ANAC58                      --------->ARR11(3)                    --------->AtMYB61            <- ->HVH21 --------->ANAC55(2)    <---------ARR11(3)            ------>ZmHOX2a(1)                <----- ---ANAC58               --------->ATHB12             <---------MYB52(1)------>MYB83       <---------   gtctacttgtcacgttctcaatcttcttgatttcgatctttcctctcaccatttcagttacttcctacaaaaccaatccagatttgataagagatttatg  21101400                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                  ---                                                                                                  ---                                 <------ZmHOX2a(2)                                      <---------ANAC46                                --------->ARR14(2)                                      <---------ANAC58                                <---------ARR14(2)                                      <---------ANAC58  --------->TOE2(3)            --------->At4g35610                                  <---------ANAC58  --------->TOE1(3)            <---------At4g35610                                  <---------ANAC58 ------->GLK1(1)       <---------MYB46(3)              --------->GLK1(2)           --------->MYB52(2) --------GLK1(1)       <-----------RAV1(1)          --------->ANAC58        --------->MYB52(1)   ---- ----TOE2(3)        <---------ARR11(3)              --------->ANAC58       --------->ARR14(2)   ----- -DOF2              --------->ARR11(3)     ---------->DOF2  ---------->DOF2<---------ARR14(2)  >>>>>>   gaaaccctaactaaatgtgaaagatttgttggcagatcagagaaacaaagtcacaagaatccaaaagtcaaaaaccagaaacggtttcttgcttgaaaac  21101500       <---------ARR11(3)       --------->ARR11(3)                                                                     <------ ------->GAMYB                  <---------ARR11(3)                                        <-------TEIL ------>P <---------DAG2        --------->ARR11(3)                                       --------->CCA1(2) ---->MYB46(1)                  --------->ARR14(2)                                       --------->ARR14(1) ---->MYB83                     <---------ARR14(2)                                      <---------GLK1(2) ------>MYB55(1)                --------->GLK1(2)                                       --------->ARR11(1) ------>MYB52(1)          ----------->GT1                                               <---------ARR14(2) ----->AtMYB61   --------->ANAC58              ----------->GT1                          --------->ARR14(2) ---->MYB46(3)   --------->ANAC58             --------->DAG2     <----------DOF2      ----------->ARR10 >>>MYB2  <----------DOF2--------->ALFIN1   ---------->DOF2     <---------DAG2      --------->ETT(2)   caaccgtgagaactttaccaagaaaatgtgggaaaatctgagaaacaaaaggtaactcccaaaaccccttttgagagctagttttgtcgagattcgcttt  21101600                                          <-----------GT1        --------->AHL20(1)                                      --------->ATHB51           --------->AHL20(2)                   <---------ARR14(2) --------->AHL20(2)         <---------AHL20(2)                   ------->TEIL   <------ZmHOX2a(1)             <---------AHL20(2)                   --------->ARR14(2)--------->ICU4             --------->AHL20(2)         --------->DAG2      --------->ANAC58           ----------->GT1              --------->YAB1              ---------->DOF2      --------->ANAC58          --------->ANAC58            >>>>>>>>>>GT-3b          --------->YAB1      --------->ANAC46          --------->ANAC58       ---------->DOF2            <---------GLK1(1) ----DOF2    <----------ID1     <---------TOE2(3)    *TSS----------->GT1     <------------CBF  <-----   aaaaattcactcaagaagacgaatttggatagataaggaataatttacataagaaggaaaagaaaaataatttgatggaaattgaaatcagaaaaagctt  21101700                                   --------->AtMYB61                                  <---------MYB52(2)                                  <---------ALFIN1                                ----------->RAV1(1)                                             <----                             --------->PCF2                                                  <------MYB46(1)                            <------ZmHOX2a(1)                                          <---------AHL20(2)                           <---------At4g35610                                         --------->AHL20(2)                         ===================RAV                                      --------->TOE2(3)                         <-----------RAV1(2)                                         ================                        <---------ZAT18                                              <----------DOF2                        --------->ZAT18   ---------->DOF2                  --------->GLK1(2) <------MYB83   <-----------GT1      --------->ZAT14--------->TOE1(3)                  <---------GLK1(2) --------- -----DOF2              <---------ZAT14--------->TOE2(3)     <-----------GT1         <---------------   tgtgtttacctctcttaggctcttagtgcaggagccacaaaccctaaagtctaatctattgtttaacaaaatgaaggaatctgtcttctttaatttggta  21101800                                                                                                   --                                                                                                  ---                                <------MYB46(1)                                                  ----                                <------MYB83                                                     ----                     <---------O2                                                                <---                     --------->TGA1a                                                           ------                     --------->O2     <------ZmHOX2a(1)                                    <---------                     <---------TGA1a--------->ANAC58                                      ---------->DOF2                     --------->ANAC46----------->GT1                                   --------->TOE2(3) -----DOF5.7(2)   <---------ZAT18   --------->ANAC58                                   <-------GAMYB< ==============================bZIP_DOF                                               <---------MYB46(3) >MYB59      <---------MYB52(1)--------->MYB59           --------->GLK1(2)            --------->MYB52(2) --AGL1 <-----------GT1       <---------MYB55(1)       <------ZmHOX2a(1)            <---------MYB52(1)   acgttttttttttccattagcccacgtaggcagtaggtaaggaaaaatagacgaagaggaatctatttgtctatgtaaaatcaactgttcgttaaaccgg  21101900    --------->LBD16                                                       <---------AHL20(2)    <------NtERF2                                                        <---------AHL20(2) ------->MYB46(3)                 ------->TEIL                           --------->AHL20(2)         < ------>DEAR3(2)               <---------ATHB12                       <---------AHL20(2)           -- ----->ARR14(2)              --------->WOX13(1)                      --------->AHL20(2)           <-- ----->SPL7                 <---------WRKY12                      --------->AHL20(2)           ------ ------ARR14(2)             <---------WRKY38(1)                   <---------AHL20(2)         <------- ----->HVH21               --------->WRKY18(1)         <-------TEIL  <---------AHL20(2) --------->TOE1(2) --GT1    ------->TEIL --------->ALFIN1   ---------->DOF2 --------->At4g35610           --------->TOE2(2) ---------SPL7       <-----------RAV1(1)--------->ETT(2)  <---------At4g35610 ----------->GT1--------   accggccggatgaatcggttctaatgtgggtcaatgaatttgtcgaaagtcgaaacgttcagctatatttatttattaaatggctaaaaacataagattt  21102000                                                                                                    <                                                                                                    -    --------->ATHB12                                                                            -----   <---------AHL20(2)                                                                           <----   --------->AHL20(2)                                                                           <----   <---------YAB1                                                                               ----- ---------AHL20(2)                                                                              ----- ------->AHL20(2)                                   <-----------GT1                             <---- -------YAB1   --------->ATHB51                    --------->AHL20(2)           <---------AHL20(2) <- --->AHL20(2)  -------->ATHB1                  <---------YAB1              --------->AHL20(1)  ------ --ARR11(3)    --------->ATHB12                <---------AHL20(2)<---------AHL20(2)        ---------- ->ARR11(3)   <---------YAB1                  --------->AHL20(2) --------->AHL20(2)    <---------GLK1(2)   attatataattggtctattattgagttttcaatttcatgttaatacatttttattaaacacacatattaaaaaaaaacatattaaaactgattctaaata  21102100                                                      --------->AHL20(2)                                                     <---------AHL20(2)                                                  -------->ATHB1 <---------AHL20(2)                               <--------HAHB4 ---------AHL20(2)                                --------->ATHB51 -------->AHL20(2)                                <---------AHL20(2) ---->ARR11(3)                                    --------->AHL20(2) -----ARR11(3)                                   <---------ATHB12 -----AHL20(2)                                   --------->ICU4 ---->AHL20(1)                                   <---------ATHB51              ----------->GT1 ---->AHL20(2)                                <---------AHL20(2)          --------->TOE2(3)       --- -----AHL20(1)                          --------->AHL20(2)         --------->AHL20(2)           ----- --------AHL20(2)         --------->YAB1--------->YAB1<---------AHL20(2)<-------TEIL           ------ --->AHL20(2)            <---------YAB1<---------ATHB12            <---------AHL20(2)      --------->AHL20(2) ----->AGL15 <-----------GT1           <---------ATHB51           --------->AHL20(2)  --------->AHL20(2)   tattaattttgtgatttacatttttctataattctaaaccaataatattcaattatttattttgaaaattaaaatacatcaatgtaaaaaaaatcaaata  21102200  Previous    Next  AGI:  At5g51860.1    Description:  MADS-box protein (AGL72). similar to AGL71, transcription factor [Arabidopsis thaliana] (TAIR:AT5G51870.1); similar to MADS-box transcription factor FBP22 [Petunia x hybrida] (GB:AAK21253.1); contains InterPro domain Transcription factor, MADS-box; (InterPro:IPR002100); contains InterPro domain Transcription factor, K-box; (InterPro:IPR002487) Range:  from: 21099070    to: 21101653    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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