Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->ICU4                                                <---------AHL20(2)                                               --------->AHL20(2)                                            <---------AHL20(2)                                            --------->AHL20(2)                                 ------                                           <---------AHL20(2)                                --------                                   <---------AHL20(2)                                       ---------                                 <---------AHL20(2)              --------->YAB1             <--------                                 --------->AHL20(2)  <---------YAB1       <---------TOE2(3) <--------         <---------CCA1(2)   <---------ANAC55(2)<---------ICU4  <---------YAB1          ---------->DOF2 -----------GT1         <---------ICU4     --------->AHL20(2) --------->YAB1       --------->ANAC58 ---AtSPL8             --------->ICU4  --------->AHL20(2)    <---------AHL20(2)    --------->ANAC58 -->AtSPL8           ----------->GT1   <---------AHL20(2)    --------->AHL20(2)  ---------->DOF2   attcacattgtttatcttatgtatagttattacatataaatttaaattaataaatatgaaaaatttataatagtttaagaaaacaaagcaaaaagattct  21094000     <-----------GT1 <---------AHL20(1) <---------ARR11(3) --------->ARR11(3)                                                                         --------- --------->AHL20(2)                                           --------->AHL20(2)            --------- --------->AHL20(1)                                           <---------AHL20(2)            <-------- <---------AHL20(2)                                       --------->AHL20(2)           --------->AHL20(2) --->TOE2(3)                                              <---------AHL20(2)    --------->TOE2(3) ->GLK1(2)                                         --------->ZAT6               --------->TOE1(3) >ARR11(3)                                       <-----------GT1              --------->ARR11(3) -GLK1(2)                                       --------->AHL20(2)            --------->GLK1(2) -ARR11(3)           --------->CCA1(2)  --------->CCA1(2)--------->AHL20(2)   <---------ARR11(3)   taatatattaccatgtataagagatttgaaaatgctaatgagatttgaaattaactctatttatttatatgagtaaacaaaatcttaaatcaaataaaat  21094100                                                                  <------------CBF                                                                 --------->ATHB12                                                     --------->TOE2(3)              ------>ZmHOX2a(2)                                                   <---------ARR11(3)              <------ZmHOX2a(2)                                                   --------->ARR11(3)             <---------ARR14(2)                                                  <---------RVE1(1)               --------->GLK1(2)                                                  <---------GLK1(1)        <-----------HVH21         --------->AHL20(2)                       --------->GLK1(1)   <---------ANAC58  ----------->GT1                                <---------ARR11(3)   <---------ANAC58          ----- <---------TOE1(3)                               --------->ARR11(3)   <---------ANAC46          <---- <---------TOE2(3)--------->AtLEC2            <---------TOE2(3) <---------YAB1    --------->ARR14(2) >AHL20(1)<---------AHL20(2)               <---------YAB1     <---------AtLEC2    <---------ARR11(3) >AHL20(2)--------->AHL20(2)          <-----------GT1--------->YAB1<---------WOX13(1)     <---------- -AHL20(2)<---------AHL20(1)    ----------->GT1 <------ZmHOX2a(1)<---------ICU4   --------->ARR11(3)   gttatggtatattaaatttgatgcaaaatatagatggtattaactatgaaggatatcttaatatgcatgattgcttgtgtcaaggatctatttatgtaca  21094200                                                                                          <---------ATHB12                           <---------AHL20(1)                                            ------>MYB46(1)         <---------ICU4    --------->AHL20(1)                                            ------------ ----------->TBP           <---------ARR11(3)                                            ------>MYB83 ------>GT1          ----------->GT1                                            ---------->DOF2 -----ZAT6      <-----------GT1            --------------->AGL15       <-------TEIL     ----------->RAV1(1) -----AtSPL8 --------->YAB1--------->ARR11(3)                     <-----------GT1     --------->MYB46(3)   gttatatatactcattaatcaccctgtaatatcttgttcttcattctctgtatggtattagagccttattacattcatctacaaaagaaccaacaattct  21094300                             --------->YAB1                            <---------YAB1                    <---------MYB59              <------ZmHOX2a(1)                 <-----------GT1          <------------CBF               <---------GLK1(1)       --------->AHL20(2)              <---------ARR14(2)       <---------AHL20(2)                                 ---------->ID1 >CBF         --------->ARR14(2)      <---------AHL20(2)     ---------->DOF2            <-----------RAV1(1)   cgttttattctaagtggatttaccaaaattttcatagtaatttatattgtaggaacttatatcaaaagatgatgtcttcgaagtctcattttgttgctct  21094400                                                                <---------ICU4                                                      ------>ZmHOX2a(1)                       <---------TOE2(3)           ---------->ID1                       <---------TOE1(3)          <-----------GT1       <---------ARR14(2)                   --------->TOE2(3)    <---------TOE1(2)   ------>ZmHOX2a(1)                   <----              <---------YAB1            <---------TOE2(2)  --------->TOE2(3)  --------->HSFB2a(2)      <---------ICU4<---------YAB1   --------->ANAC46--------->TOE2(3)  --------->ARR14(2)    -------   tctcttgatcatttttctcattgttaatgttcaatctactcgtaagtttttttttccttatcctaaaaattgcatattttccagtatatataggtatcat  21094500                                                                  --------->ATHB12                                                                <---------WOX13(1)                                                              --------->ATHB12                                                             <---------YAB1                 --------->ANAC58                 <---------AHL20(2)                 --------->ANAC58                --------->AHL20(1)            --------->YAB1                       <---------AHL20(1)           <---------AHL20(2)                    <---------ARR11(3)          --------->AHL20(2)                     <---------AHL20(2)          --------->AHL20(1)       --------->AHL20(2)   <---------AHL20(2)       --------->YAB1  --------->DAG2            --------->AHL20(2)       --------->AHL20(2) --------->YAB1  ------->TEIL  <---------YAB1      <---------YAB1  ---------->DOF2  --------->ANAC55(2)   <---------AHL20(2)   <---------TOE2(3) -----YAB1<---------AHL20(1)       <---------AHL20(2) --------->YAB1              <---------YAB1 -->YAB1  <---------AHL20(2)       --------->YAB1--------->ARR11(3)            --------->ICU4--------   cagtgtttataatataatcacccaaaaagcataacaattatatgtaactaatatatttataatttgattgatttaacagggattatggatgattcaagcg  21094600                                                     <---------WOX13(1)                                                    >>>>>>>>>GATA-2                                                    >>>>>>>>>GATA-4                                                    >>>>>>>>>GATA-3                                               <---------ANAC46                                            --------->DAG2                                          ---------->DOF2              <---------At4g35610                                        <---------ANAC55(2)            --------->At4g35610                                        --------->ANAC55(2)        <---------HSFB2a(2)                                        --------->ANAC58    <---------ALFIN1                     ---------->DOF2    --------->ANAC58   --------->MYB46(3)        ---------->DOF2     <-----------HVH21  --------->ALFIN1    --------->HSFB2a(2) <---------ANAC46 <-----------HVH21     <---------YAB1   <-----------GT1    <----------DOF2 ->ANAC46   <------ZmHOX2a(1)    <---------GLK1(2)  >>>>>>>>>GATA-1--------->HSFC1(1)   attgtgtattcaaaggaccatgtcaaaggaggtcagattgttacgaaaggtgtggattgaaaccaccttctagagctgctttgtgtcaacctatgggact  21094700                                                                                     --------->At4g35610                                                                            --------->AHL20(2)                                                                            --------->AHL20(1)    ---                                                                          <---------AHL20(1)      <--                                          <---------YAB1                  <---------AHL20(2)     >>>>                           --------->ARR11(3)                             --------->AHL20(2)     ----                           --------->ARR14(2)                             --------->AHL20(1)     ----          <-----------RAV1(1)       --------->AHL20(2)                 --------->AHL20(2)      <-----         ------->TEIL      --------->GLK1(2)                <---------TOE2(3)  <---------AHL20(2)----    <---------ANAC46       <---------ARR14(2)        <---------ARR11(3)<---------AHL20(2)   ---------    <---------ANAC58       <---------ARR11(3)<---------WOX13(1)        --------->AHL20(1)   <--------    <---------ANAC58      --------->RVE1(1)--------->ATHB12 <---------TOE1(3)<---------YAB1<---------AHL20(2)   ccaaggccgtgtatgttgttgtctctaaaaatctgcaactaaatatgattgacaatatgttcaaggtttgaaataaaatattatatcatctaaataatca  21094800         <---------YAB1       --------->YAB1 ------>MYB46(3) -------MYB55(2) >>>>>>>>>>>>>LFY ----->ANAC58 ----->ANAC46     --------->ANAC46                                                                  - ------GT1 <---------AHL20(2)                                                                       - ----->ANAC58   <-----------GT1                  <---------ARR14(2)                 <---------WOX13(1) >YAB1 <--------HAHB4                 ------->TEIL                                 <---------AtLEC2<- -ICU4<---------YAB1   <---------ANAC55(2)       --------->ARR14(2)  --------->AHL20(2)         <----   cccaatgtattattattttcacatcacatgtctcagtatgtatgcaaatcgaatatgaattagacagaatataaaataaaactttgaatgactgtatgac  21094900  Previous    Next  AGI:  At5g51845.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G23212.1) Range:  from: 21094369    to: 21094728    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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