Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->LBD16                                                --------------->AGL15                                               <-----------------AGL1                  <---------At5g28300    <---------ARR11(3)              <----------DOF2            --------->ARR11(3)             --------------->AGL15       <---------AHL20(1)          <-----------GT1                --------->AHL20(1)                 <---------ANAC58       <---------ICU4                   <---------AHL20(2)                  <---------ANAC46      --------->AHL20(2)            <---------AHL20(2)                      <---------ANAC58    <---- ----ANAC58  ===================================================MADS_MADS <---------ANAC46    <------ ----ANAC46  <---------DAG2   ---------->ID1 <-----------GT1  --------->GLK1(1)              <------- ----ANAC58  <---------------AGL15  --------->AHL20(2)      <------ZmHOX2a(1)                --------   tgtatcaattcattaccttttacagtgtttttgtttttttaaatatttttccccaatttgtaggaactcaagaatgttgtgtgtgtttttttagtttgtt  21088800                                     <-----------GT1                                <------MYB46(1)                                <------MYB83                               <---------AtMYB61        --------->LBD16        --------->MYB59      <---------LBD16        <---------ANAC46     <---------LBD16       <------MYB83<---------YAB1   ------>ZmHOX2a(2)       --------->MYB55(2)  <---------GLK1(1)        <---------MYB46(3)                                                       < --------->ARR11(3)        <------MYB46(1)                     ---------->DOF2                     <- <---------ARR11(3)       <---------AtMYB61          <------MYB46(1)                              --- -----MYB46(3)            --------->ALFIN1           <------MYB83                                 <-- -GAMYB--------->LBD16  <---------ANAC58            --------->MYB59       <-------TEIL           <--- --MYB46(3)             <---------ANAC58   --------->YAB1   <---------HSFB2a(2)   ----------->GT1---- ->MYB52(2)             <---------ANAC46  <---------YAB1    --------->HSFB2a(2) <----------DOF2  ----   gttgatctcccggagttttagtattggggtggtttggttttactattatcaagttaggttttctacaaagaacaaattcatgctttgtaaaaactacttg  21088900     --------->ANAC55(2)         --------->ANAC58                                --------->HSFC1(2) <----------DOF2--------->ANAC58 --------->ANAC58                                --------->HSFB2a(1) ---------MYB52(1)             <---------DOF5.7(2)                               <---------HSFB2a(1) --------RAP2.6(3)          <----------DOF2                                      <---------HSFC1(2) ------------>AGL15    <---------ALFIN1                             <---------TOE2(3) -------------AGL15  --------->ANAC58                     <-----------GT1  <---------TOE1(1) --------------AGL1  --------->ANAC58       --------->AHL20(2)     <---------At5g28300      <-------- ------>ID1     --------->ANAC58 --------->ANAC46    ----------->GT1<---------TOE1(3)  ----------->RAV1(1) ------------->AGL1  <---------ALFIN1       <---------AHL20(2)  <----------DOF2<------ZmHOX2a(1) ----   ccgttttatgtaacgagaacgacacacactctttaacgcaaaaccattaattgtttagttaaaccggtttacggtttacgaggagtttcccacagattcc  21089000                                  ------->MYC3                                  <-------MYC3                                 --------->ANAC55(2)                                 --------->ANAC58                                 --------->bZIP60(1)                  ----------->HVH21     --------->ANAC58                <---------At4g35610     --------->ANAC58                          <---------ANAC46        --------->YAB1           <---------TGA1a                                --------->ALFIN1        <---------ICU4           --------->ANAC46                             <---------ZAT2       --------->ICU4            <---------ANAC55(2)                          --------->At4g35610     <---------ICU4              --------->ANAC58                             <---------At4g35610     <--------HAHB4              --------->O2               ----------->GT1   --------->ZAT2  -------     --------->YAB1  ------->TEIL--------->TGA1a  --------->ATHB12           <---------AGP1 <-------- -GLK1(2) <---------YAB1         <---------O2    <---------YAB1     ----------->GT1  --------->At5g28300 -->ZmHOX2a(1)  --------->At4g35610----------->HVH21<---------WOX13(1)<---------YAB1----------->GT1 -   tcatcgataattatgttgagctgaacgtgatgctcacgtgacaagtcaaacttgattgggattagtgaaattgtgaatagagctgggggtaaaaacgaca  21089100              ------->GAMYB           <---------DOF5.7(2)         --------->DOF5.7(2)                                       <---------ICU4        --------->YAB1                     <---------ANAC46      <-----------GT1                 <---        --------->TOE2(3)                <---------ZAT14       --------->AHL20(2)               <----     --------->YAB1                  --------->ARR11(3)      --------->TOE2(3)                -------  --------->YAB1 <----------DOF2     <---------ARR11(3)    ------->TEIL                   --------->YAB1 <---------YAB1 <---------ANAC46<---------MYB52(1)       ------->GAMYB*TSS       --------->DEAR3(1) ----->CBF --------->MYB52(1)  --------->TOE1(3)        --------->MYB46(3)     <---------At5g28300--- --ID1<---------TOE2(3)        --------->TOE2(3)        <---------MYB52(2)    <-----------GT1 ------- -------->AHL20(2)            ----------->GT1         --------->MYB52(1)  <---------MYB52(1)  <------   atttttataatgttaacggcgttaagaagggaacgttaagttcttcagtggaaacttaacgaacattaaacatttcgttatcaccgtcaaaatcaaaatc  21089200                                                                            <---------ATHB12     <---------YAB1                                                         ----------------->AGL3  ----------->GT1  ------->MYC2                                       <-----------ARR10 --------->SPL7    ------->MYC3                                  --------->ANAC58 ------LBD16       <-------MYC2<----------DOF2                   --------->ANAC46 -----LBD16        <-------MYC3<---------DAG2                    --------->ANAC58 -->ARR14(2)      --------->ANAC58                             <---------ALFIN1 ------>LBD16     --------->ANAC58                            --------->ZAT14--------->YAB1 -->GLK1(2)     <---------ALFIN1         <------ZmHOX2a(2)    <---------REM1(2)<---------YAB1 ---ARR14(2)XXXXXXXXXXXXXXXXXXXX>MIR835-5P            --------->ALFIN1--------->GLK1(2) ----------->GT1   cgggacgataattctcgcacacgttctccatcactttccctcgatccaaaaccagagtgggaactacacgcgaatcgaatcataaatggaatgtgaattt  21089300                                                                               <------ZmHOX2a(2)                                                                              <---------ARR14(2)                                                                              --------->ARR14(2)                                                                            <---------DEAR3(2)                                                                          --------->ATERF1(1)                                                                          <------NtERF2                                                                        <---------bZIP60(1)                                                                        <---------ANAC58                                                                        <---------DEAR3(1)                                                                        <---------ANAC58                             -------->ATHB1                             <---------ANAC46                             --------->ATHB51                      -------->HAHB4                             --------->ATHB12                      --------->ATHB12               --------->ANAC58                                    <---------ICU4               --------->ANAC58                                   --------->ICU4------>ZmHOX2a(2)   -            <----------ID1  --------->ICU4              ===============================HOX2a_HOX2a  =       <------ZmHOX2a(1)    <---------YAB1              <------ZmHOX2a(1)<-----------HVH21      ----- <<<<<<<<<<GATA-1          <----------DOF2              ==============================HOX2a_HOX2a  <-   tgaaatcgaggaagaagacgaaatcggagcattattggattgagttttgaagtttttaggagaaggaaatgatggcgtcggatccaaaactgaaggctga  21089400           --------->ARR11(3)         <---------AtMYB61        <---------MYB52(1)            <---------ANAC58     <------NtERF2                    <---------ANAC58    ------>NtERF2             ------>ZmHOX2a(1)                                               -------    <---------At4g35610  <---------HSFC1(2)                                               <------MYB46(1)   --------->ARR14(2)    --------->HSFC1(2)                                              <---------AtMYB61   <---------ARR14(2)    <---------HSFB2a(1)                                            <--------P ----->ZmHOX2a(2)        --------->HSFB2a(1)                    --------->YAB1        --------->ALFIN1 ====================================HOX2a_HOX2a              ------->TEIL   --------->YAB1 <-------- ------>ARR10  --------->AtLEC2       <---------ANAC46       <---------CCA1(2)        <-----------RAV1(1) -----ZmHOX2a(2)        ----------->ARR10          ----------->GT1          <---------YAB1<------MYB83   gatcggagccgatggtcttgcaagagaagctcctgttattgcttacacagagaaggtaaacttgaatcttcatgtattatcagaacaagtgttggtgtga  21089500                                                                             <---------ANAC55(2)                                                                             --------->ANAC55(2)                        <---------YAB1                                       --------->ANAC58                  --------->ARR14(2)                                         --------->ANAC58--------               --------->ANAC55(2)                               <---------ZAT2            <---------ARR14(2)         ----------->HVH21                                       --------->At4g35610       --------->ARR14(2)        --------->TOE1(3)                                        ----------->RAV1(2)    -------------       ----------->RAV1(2)      <---------AtLEC2                 <---------At4g35610   <-------------  <----------DOF2 <---------ARR14(2)                             --------->ZAT2      ------->TEIL  ----------------------->TaNAC69(2)  ====================HOX2a_HOX2a  <------ZmHOX2a(1)<------------ -->ALFIN1     <---------ANAC55(2)    <------ZmHOX2a(2)        <-----------RAV1(2)  <---------CCA1(2) -ANAC46--------->TOE2(3) --------->ARR11(3)       <------ZmHOX2a(1) <---------TOE2(3) <-------------   tgctcttttacctgaacgcgtatttgatgattttgtatggatcagataatcgaggaagagcaagttcagctgaggaagtaagtaatgtatctaaatctgg  21089600                                                    <---------ARR11(3)                                        --------->ZAT18  <---------YAB1                        <---------ZAT14              --------->STY1(2) --------->AHL20(1)                     <---------ZAT18              <---------At4g35610 <---------AHL20(1)                     --------->ZAT14    <---------GLK1(2)    <---------ICU4 <---------AHL20(2)                    <---------ZAT6 ------>ZmHOX2a(2)         --------->YAB1 ->TOE1(2)                            <---------------AtSPL8         --------->At4g35610   <---------ZAT2 -->AGL15                             --------------->AtSPL8         --------->ZAT2        --------->At4g35610 ----AGL3                            <---------ANAC46<------ZmHOX2a(2)         <---------ATHB12 <---- ---AGL15    <----------DOF2       <---------ZAT14  --------->ARR11(3)    --------->TOE2(3)<---------At4g35610 ----AGL2 ------>ZmHOX2a(2)---------->DOF2      <-----------GT1      <---------ZAT2        --------->ZAT2   gattatatttgatcgctttgttcaatttttaaaggaatgtagtgtacattttacgatcttagcttctctccagctagcttaatcataagtctcagctagt  21089700  Previous    Next  AGI:  At5g51830.1    Description:  pfkB-type carbohydrate kinase family protein. similar to pfkB-type carbohydrate kinase family protein [Arabidopsis thaliana] (TAIR:AT1G66430.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61782.1); contains InterPro domain Carbohydrate/purine kinase (InterPro:IPR011611); contains InterPro domain Carbohydrate/puine kinase, PfkB, conserved site (InterPro:IPR002173); contains InterPro domain Ribokinase; (InterPro:IPR002139) Range:  from: 21086798    to: 21088961    Orientation: Forward Links:  TAIR  MIPS    AGI:  At5g51840.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO17699.1) Range:  from: 21089170    to: 21091664    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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