Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <---------At4g35610             <------NtERF2           <---------ZAT18           --------->ZAT18         <---------SPL7     <---------HSFB2a(2)     --------->HSFB2a(2)                                    <---------AHL20(2)    <---------LBD16                                        --------->AHL20(2) ------GT1--------->ATERF1(1)                     ------>NtERF2 ------>AtSPL8                 ---------->ID1     <---------DEAR3(2)        --------->DAG2 -ICU4--------->LBD16     <----------DOF2        <---------DEAR3(1)        ---------->DOF2        --- -------AtSPL8<---------MYB52(1)  ------>ZmHOX2a(1)<------NtERF2--------->TOE2(3)       --------->MYB52(1)   ccttcttccggagtccgctagttccagtcttttgtccttcaataggcttcgtcggcaacgatttaatctaaaacacaaaaaggcataaaaaaacgaatca  21084900                                                                                <---------At4g35610                                                                                --------->At4g35610                                                                             <---------ZAT14                                                                         ------>NtERF2                                                                         <---------ATERF1(1)                                                                        --------->DEAR3(1)    <------ZmHOX2a(2)                   ---------->DOF2               ------>NtERF2   --------->ARR11(3)        --------->ANAC58       --------->TOE1(3) --------->LBD16  --------->YAB1             --------->ANAC58       --------->TOE2(3)<---------ANAC46  ------->GAMYB            ---------->DOF2----------->GT1           <---------LBD16 --------->MYB46(3)       --------->ARR14(2)     <-----------GT1  --------->ARR14(2)           <----- ------>MYB46(3)          <---------ARR14(2)--------->AHL20(2)    <---------ARR14(2)        <------ZmHOX2a(1)   acaacgatcatggaaaattcaaaattcagaaacgcagggagagaaagaaaataacctcaatgctatcagttccggcgactacagatgaagatgaggagga  21085000                                                                                                    -                                                                                  --------->MYB52(1)-                                                                             <------NtERF2<---------ARR14(2)                                   <---------YAB1                           ----------->GT1         -                              <------MYB83                                 --------->ANAC58         -                              <------MYB46(1)                              --------->ANAC58         <                             <---------AtMYB61   <------NtERF2            --------->RAP2.6(3)       <                             --------->MYB59    --------->LBD16     <---------LBD16       --------->ARR14(2)                     --------->GLK1(2)         <---------HSFB2a(2) --------->MYB52(1)------->GAMYB  -        ----------->GT1    <---------MYB52(1) <---------LBD16   <---------DOF5.7(2)<---------At5g28300  <---------YAB1     --------->ARR14(2)    ------->TEIL    --------->DAG2 --------->ATERF1(1)      <- -ZmHOX2a(1)         <---------ARR14(2) <---------YAB1    ---------->DOF2<---------ATERF1(1)       <-   tgctataatcgagtgaaaacgagaattcggtttggttctgatatgaatgccggaagtagataaagtaaacgacggagacggcaataacggcgaatactta  21085100                                                                               <------NtERF2                                                                               --------->ATERF1(1)                                                  --------->bZIP60(2)         <---------DEAR4(2)         --------->TOE1(2)                        --------->ANAC46            <---------ATERF1(1)       ------->TEIL                               --------->bZIP60(1)         <---------RAP2.3(1)   <------NtERF2                                  <---------bZIP60(1)         ------>NtERF2   --------->ATERF1(1)                           <-----------STF1             <---------ERF1   <---------------------WRI1                  --------->ETT(2)               <---------ORA47(2)  --------->LBD16                              <---------WRKY38(1)           --------->DEAR3(1)  ------>NtERF2                                <---------ETT(2)              <---------RAP2.3(3)  <---------ATERF1(1)                          <---------WRKY12              --------->ATERF1(2) <---------DEAR3(1)                         <------MYB46(1)                  <---------RAP2.3(2) --------->RAP2.3(3)                        <------MYB83                     <---------DEAR3(1) --------->ATERF1(2)                       <---------AtMYB61                 <---------ATERF1(2) --------->DEAR3(1)                        --------->MYB59                  --------->ATERF1(1) --------->RAP2.3(2)                      <--------P                       <---------RAP2.3(1) <---------ATERF1(2)                  <---------ANAC58                     <---------ATERF1(1) -------->RAP2.3(1)                   <---------ANAC58                     --------->LBD16 -------->ATERF1(1)                   <---------ANAC46      --------->ATHB12<---------ABI4(1) -------->DEAR4(2)                --------->ARR14(2)       <---------YAB1  ------>NtERF2 -------->ORA47(2)                <---------ARR14(2)   <---------YAB1     <---------DEAR3(1) ------NtERF2                     ------->TEIL <---------DEAR3(1)        <---------LBD16 ---------LBD16 ----------->GT1   --------->GLK1(2) --------->TGA2(2) <---------At4g35610 -------->ERF1---------->DOF2    <---------ARR14(1)<-----------TGA1   --------->At4g35610  ---------- --------ATERF1(1)               <---------CCA1(2)<---------O2  --------->ATHB12       <---------ANAC58 --------RAP2.3(1)               <---------GLK1(2)--------->O2<---------WOX13(1)       <---------ANAC58   gcgccggcgaacctagaaaagagaaatacggtatcgaatctcgtgtaggtcgacgtcattgttgattgatttagctccggcggcgatttgagtgagtgaa  21085200                                                          <---------ARR11(3)                                                 <---------LBD16                                                 --------->LBD16                                               ------>ZmHOX2a(2)                                              <------ZmHOX2a(2)                                             --------->ARR11(3)                                             <---------ARR11(3)                                             <---------ARR14(2)                                             --------->GLK1(2)                                             <---------ARR14(3)                                             <---------AGP1                        *TSS                 <-------GAMYB               <-----------ARR10                    <------ZmHOX2a(1) <                ----------->GT1              --------->ARR14(3)       <---------LBD16               <         --------->DAG2                      --------->ARR14(2)      <---------ANAC58      <-------MYC3   ----------->GT1   ---------->DOF2     <------ZmHOX2a(1)--------->ARR11(3)  --------->TOE1(2)------ <------ZmHOX2a(2)<---------MYB52(1)     =============HOX2a_HOX2a    <---------ANAC58      ------->MYC3 ->GT1  ---------->DOF2     <---------ZAT14 <------ZmHOX2a(1)        <---------ANAC46   ----------->RAV1(1)   tagatcagtgaaaagtgtccgttaaaagagtgaagaagagagaggaggatctggggaagagatattgagttgctcggaagcctaggactgccacatgtac  21085300                                                 <-----------TGA1                                                --------->ANAC58                                                --------->ANAC55(1)                                                <---------O2                                                --------->bZIP60(2)                                                --------->O2                                                --------->TGA1a                                                <---------TGA1a                                                --------->ANAC55(2)                                    <---------TOE1(2)                      ====================================bZIP_DOF                      <----------DOF2           --------->ANAC46             <-----------GT1    ------>ZmHOX2a(1)<-----------HVH21           ===============================================bZIP_DOF           <----------DOF2     <---------ALFIN1 --------->ANAC58                                  <--         <---------YAB1      ------>ZmHOX2a(1) <-----------STF1                          --------->YAB1 ---------ANAC58  ========================================bZIP_DOF                ---------->ID1  <-- ---------ANAC58  <----------DOF2  ------>ZmHOX2a(1)                 --------->KAN4(2)   --------->AHL20(2) ->TEIL<---------CCA1(2)  <-----------GT1   <-----------GT1     ----------->GT1 <-----------RAV1(1)   ttgcttcgcttatctttacactttctttttcctcctcctcggtttattacacgtcactgattcgattagtatattctttggtctgtcgcaataaaaacgt  21085400                                                                          ------>ZmHOX2a(2)                                                                         --------->CCA1(2)                                                                         <------ZmHOX2a(2)                                                                        --------->ARR11(3)                                                                        <---------ARR11(3)         <---------ANAC58                                               <---------ARR14(2)         <---------AtLEC2          <---------AHL20(2)                   --------->ARR14(2)         <---------ANAC58         --------->AHL20(2)                    --------->AGP1  <---------ANAC58                <---------AHL20(2)                    <---------AGP1       ------->PIF5  <---------ANAC46         <---------HSFB2a(2)                         --------->RVE1(1)     <-------PIF5  <---------ANAC58         --------->HSFB2a(2)                      ---------->DOF2      <---------At4g35610 ----MYB46(1)            <---------At4g35610                 --------->YAB1              <---------ZAT2 ----MYB83               --------->At4g35610   ----------->GT1 <----------ID1          <--------P   tggtacttgtagcatggccatatggtcttctgcaaattaaatgtctaatgcgttaaactccaataagaacaaaagatctgataattttggtagctcgtgg  21085500             --------->LBD16            <---------HSFB2a(2)            --------->ANAC46            --------->HSFB2a(2)           <---------LBD16                                                   <---------ANAC58        ------>ZmHOX2a(2)                                                    <---------ANAC46      --------->ARR11(3)                                         <---------YAB1            <---------      <---------ARR11(3)         <-----------GT1     --------->ARR14(2)      <---------ANAC58  <---------ANAC58 --------->AHL20(2)                <---------ARR14(2)     --------->ATHB12  <---------ANAC58 <---------AHL20(2)            <-------TEIL <---------AHL20(2)      --------->TOE1(2)   aatggcatgatcttccgcaaaataaatgtgattttaaactacttctatatatacatatactcattttatcagtgaaattgagtgggaacgtagtaacagt  21085600                                         --------->ATHB12                                   ------->TEIL                                         <---------ICU4                                     <--------                                        <---------ATHB12                                    <--------                                        --------->ICU4                                      <--------                                        <---------YAB1                                      ---------                                ------->MYC2                  --------->ANAC58              ---------                                <-------MYC2                  ----------->GT1              <---------ARR14(1)                                ------->MYC3                  --------->ANAC58      --------->RVE1(1)                                <-------MYC3           --------------->AGL15        --------->CCA1(1)               <-----------GT1---------->TaMYB80       <---------------AGL15    --------->AHL20(2)    <---------YAB1         <---------ANAC46        --------->At4g35610    ----------->RAV1(1)  <----- --GT1---------->DOF2   <---------MYB52(1)         <---------At4g35610   --------->ANAC46  <---------CCA1(2)   tttgatatgaaagttattaagcatccgtttcgcatatgcttaatgatttcttcatctccatatcaagaaaaaatcgcgacactaaaatatcgcgaatctt  21085700                                                --------->ARR11(3)                                                <---------ARR11(3)                                               --------->RVE1(1)                                               --------->CCA1(1)                                      <------NtERF2 <-----------RAV1(1)                 ----------->RAV1(1)                                   <---------AHL20(2) -ARR14(2)                           ------>NtERF2                                        <---------AHL20(2) ---ARR10                           <---------ETT(2)                          <---------ANAC46 -ARR11(1)                          <---------bZIP60(1)                    <--------P     --------->AHL20(2) >ARR14(2)                          --------->ETT(2)              <---------YAB1        --------->YAB1 >GLK1(2)                           --------->bZIP60(1)       <---------ANAC58<---------ANAC58 -----DOF2               ----------->GT1   --------->AHL20(2) <---------ANAC58<---------ANAC58     <-   tttgtgttgctaagacaagaagttgaatggtgcaaatggcgacactaaaatatctcactaaaattcttgtgattttggtagcttgtggaatattaatttt  21085800  Previous    Next  AGI:  At5g51820.1    Description:  PGM (PHOSPHOGLUCOMUTASE). Identical to Phosphoglucomutase, chloroplast precursor (PGMP) [Arabidopsis Thaliana] (GB:Q9SCY0); similar to phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative [Arabidopsis thaliana] (TAIR:AT1G23190.1); similar to phosphoglucomutase, cytoplasmic, putative / glucose phosphomutase, putative [Arabidopsis thaliana] (TAIR:AT1G70730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17695.1); similar to Phosphoglucomutase, chloroplast precursor (Glucose phosphomutase) (PGM) (GB:Q9SM59); similar to Phosphoglucomutase, chloroplast precursor (Glucose phosphomutase) (PGM) (GB:Q9SMM0); cont Range:  from: 21080594    to: 21085283    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version