Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->LBD16                                                 ----------->GT1                                                ------->GAMYB                                              ------>MYB46(1)                                              ------>MYB83                                              -------->P                                              --------->MYB52(1)                                             --------->MYB52(1)                              <-------PIF5                                             --------->MYB55(1)                              ------->MYC2                                            --------->MYB46(3)                               ------->MYC4                                            ------->GAMYB                                    ------->PIF5                                           <---------MYB52(2)                                <-------MYC2                                           <---------MYB55(2)                                <-------MYC3                                           --------->MYB46(3)                                ------->PIF4                                         <-----------GT1            <---------ARR11(3)       <-------PIF4                               --------->ANAC55(2)        <------MYB46(1)                    ------->MYC3 --------AHL20(2)              <---------ANAC55(2)        <------MYB83                    <---------ANAC58 --->ICU4                    <-----------GT1--------->AtMYB61       --------->ARR11(3)    <---------ANAC58 ->YAB1         --------->MYB52(1)     <---------MYB52(2)--------->MYB59                  <---------ANAC46   tttaaaacaatttcaacaaaacgaatacttgttacataacatctaaccaaccggataatttggtcgctaaaatctttgttttttagtgaattgcatgtgc  21051600                                                                     ------>ZmHOX2a(2)                     <------ZmHOX2a(1)                          <-------MYC3             <---------ARR14(2)                    ---------->DOF2 --------->ARR11(3)               -             --------->ARR14(2)                --------->YAB1   ------->MYC3              --------->ANAC55(2)             --------->GLK1(2)           --------->YAB1    --------->ANAC58               <---------ANAC55(2)    --------->ARR11(3)                   ----------->GT1   --------->ANAC58------>ZmHOX2a(2)    <----   aaagtttatcttgagaatttggaggatgtcttaaaatgtagaatggtaataagaaaagagtaagcatgtgatctcgatcggaatagaacatcacatattt  21051700                                                                                                    <                                                                                                    <                                                                                                 ----                                                   --------->SPL7                                ----                                                   ------->TEIL                                 -----         <-----------GT1                         <---------SPL7                                ------    --------->AHL20(2)                          <---------ANAC58                              -------    <---------AHL20(2)                          <---------ANAC58                              <------    <---------YAB1                             --------------->AtSPL3                         <------ <---------AHL20(2)                            --------------->AtSPL8                        -------- <---------AHL20(1)                         <---------ANAC46                        <---------ARR14(2) --------->AHL20(1)                 --------->AtMYB61                               --------->ARR14(2) --------->AHL20(2)        --------->At4g35610 <-------TEIL                 <----------DOF2 --------- -------->AHL20(2)      --------->At4g35610 <---------ANAC58          <---------AHL20(2)  <---------MYB52(2) -----AHL20(2)          <---------At4g35610 <---------ANAC58     ------->TEIL   <-----------GT1------   gattatattattaactatagaagaagagctgatgaagaccatcactgcgtgcgtaccctatcaaacgtatttttaattctttttccgatacgactaacca  21051800                                                   <---------AHL20(2) <---------ARR14(2)                               <---------AHL20(1) <---------ARR11(1)                               --------->AHL20(2) <-----------ARR10                                --------->AHL20(1) --------->ARR14(2)                               <---------AHL20(2) ------->TEIL                                    <---------AHL20(2) ---------CCA1(2)                   <---------AHL20(1)                             <-----------GT1 ---------ARR14(1)                  --------->AHL20(1)                        --------->AHL20(2) -->MYB46(1)                       --------->RVE1(1)                          --------->YAB1 -->MYB83                     --------->YAB1     --------->AHL20(2)           <--------ATHB1 ---->MYB52(1)               <---------YAB1   --------->AHL20(2)              <---------AHL20(1) --->TOE2(2)              <---------YAB1      <---------AHL20(2)              <---------ICU4 -->MYB46(3)           --------->AHL20(1)    <---------AHL20(2)               --------->ATHB51 ---MYB55(2)          --------->AHL20(2)     --------->AHL20(2)              <---------ATHB51 ---MYB52(2)          --------->YAB1--------->ARR11(3)                       --------->ICU4 >P                  <---------AHL20(2)<----------DOF2                   <---------ZAT14 >MYB52(1)        <---------AHL20(2)<---------ARR11(3)                --------->RAP2.6(3)<----------DOF2 ->GAMYB         --------->AHL20(2)--------->CCA1(1)           --------->YAB1<---------ATHB12    ----   acgtatcttcttctctctattaaataatattatcaaaatatctttttttaaattaatttgctcaatcttcaagactgcaataatttttcaactttacaac  21051900                                                    --------->ARR11(3)                                                    <---------ARR14(3)                                                    <---------ARR11(3)                                                    <-----------ARR10                                                    --------->ARR14(3)                                                    --------->ARR14(2)                                                    <---------ARR14(2)                                                    --------->AGP1                                                    <---------AGP1                                                   <---------CCA1(2)                       ----------                                                  ----------->ARR10                        <---------                                        --------->LBD16                                 <---------ARR11(3)                                      <---------LBD16                                   --------->ARR14(2)                                    --------->GLK1(2)<------ZmHOX2a(2)                  --------->GLK1(2)       <---------ZAT2               --------->ARR14(2)                                  --------->ARR11(3)       --------->At4g35610   <------ZmHOX2a(2)  <------ZmHOX2a(2)                       <---------ARR14(2)       <---------At4g35610  --------->ARR11(3) <---------ARR11(3)          --------->At4g35610 ------   <----------CDC5          <---------ARR11(3) --------->ARR11(3)        <---------ICU4<---------GLK1(2) ------>DOF2      ---------->DOF2   <---------ARR14(2)------>ZmHOX2a(2)  --------->YAB1<---------ARR14(1)   aaagccctgagctgttcttctaaagactaagatcacaaaatccgcataagatcagatcttgctgtctcatcttcatcatcagaagtagagaatcttttaa  21052000                                                                                           <---------YAB1                                                                              <---------TGA1a                                                                           ----------->HVH21   <-----                                                                         --------->ZAT2  --------->YAB1                   --------->AHL20(2)                                    <---------At4g35610<--------         <----------DOF2     <-----------RAV1(2)                         --------->At4g35610---------      <-----------GT1      ----------->RAV1(1)   *TSS                    <---------ZAT2 ----------->GT1      <---------AHL20(2)  --------->AtMYB61   <------NtERF2             ------->TEIL<---------SPL7   <---------ICU4  <---------AHL20(2)       --------->ETT(1)         --------->ANAC46   <---------ZAT6  --------->ICU4--------->AHL20(2)      <---------WOX13(1)        <---------SPL7  <---------------AtSPL3 ----->AGL15    <---------AHL20(2)     <------------CBF           --------->ZAT14 --------->ALFIN1 ------AGL15   <---------AHL20(2)     --------->ATHB12           --------->ALFIN1<-------MYC3  ------ ---->DOF2     --------->AHL20(2)    <---------YAB1           <---------DEAR3(1) ------->MYC3  <-----   aggaatatttacttttattaatttaagaccaccagatggatgattgtcgggacaagagaagaagacggtgtacgaagctgacatgtggtactgataataa  21052100 ----ICU4                                            <---------ANAC58 -ICU4                                       --------->ANAC58 >YAB1                                  <----------ID1     <----------DOF2 --->MYB52(1)                      ---------->DOF2   <---------ANAC58 ------GT1              --------->GLK1(2)    --------->ANAC58          --------------------->WRI1   cgacatggagaagatgatgcacagagaaactgagaggcaaaggagacaagaaatggcttctctttatgcctctcttcgttctcttctccctcttcacttc  21052200                                                                      <---------ICU4                                                             ========================HOX2a_HOX2a                                                             ------>ZmHOX2a(2)                                                            =========================HOX2a_HOX2a                                                           <---------ARR11(3)                   ---------->DOF2                         --------->ARR11(3)           --------->ANAC46                                --------->AGP1           --------->ANAC58     ------>ZmHOX2a(1)         <---------CCA1(2)           --------->ANAC58     ===================================HOX2a_HOX2a         <---------ALFIN1       ====================================HOX2a_HOX2a         --------->ZAT6         <---------YAB1<---------ICU4<------ZmHOX2a(2) ------>ZmHOX2a(1)   <---------ARR11(3)   --------->TOE1(3)--------->ARR14(2)<---------AGP1  ---------->ID1   --------->ARR11(3)   --------->TOE2(3)<---------ARR14(2)--------->ARR14(2) <----------DOF2  ------   atcaaggtctcacactcccctaaaaaccctaatcctgatttcggttcttcatgacttcttagatctacttaatctttgtccttttatttagtcttccatg  21052300                                                                                                   <-                                                                                         ------>ZmHOX2a(2)                                                                                        <------ZmHOX2a(2)                                                                                       --------->AGP1                                                        <---------ZAT14         ------>ZmHOX2a(1)  <-                                                  <---------MYB59               ================HOX2a_HOX2a                                                 <---------ANAC55(2)            ===============HOX2a_HOX2a                                                 --------->ANAC55(2)           --------->TOE2(3)<----                                               <-----------GT1            <---------HSFB2a(1)  <-----                   ----------->GT1          ----------->GT1 <---------ZAT6--------->HSFB2a(1)  <-----          --------->DAG2                    <---------bZIP60(1)          --------->DAG2<---------AGP1         ---------->DOF2                    --------->bZIP60(1)    --------->TOE2(3)   --------->ARR11(3) --->AtLEC2     --------->CCA1(2)    <----------DOF2    --------->ZAT14---------->DOF2 <---------ARR11(3)   taagaaaatgaaaaagggatatagtaacaagtgttttgactttgtgatgttacttaactatagtgtttttcttaaaaggttcctaaatagatctattgct  21052400                                                               <------ZmHOX2a(2)                                                              --------->AGP1                                                              --------->ARR11(3)                                                             --------->At4g35610                                                             <---------At4g35610                                                          --------->TGA2(2)                                                         <-----------HVH21                 --------->DAG2                                                         <-----------TGA1        <---------ZAT14                                                        --------->ANAC46         --------->ZAT14                                                        =============================================bZIP_DOF                            ======================================bZIP_DOF       <---------ZAT18                            <----------DOF2             --------->O2 <---------WRKY45<---------------AGL15                        <---------GLK1(2)               --------->bZIP60(2)    --------->At5g28300                        <---------ARR14(2)              --------->bZIP60(1)    <------NtERF2                        --------->ARR14(2)              <---------bZIP60(1)  --------->ALFIN1 --------ANAC58        <------NtERF2                    <---------TGA1a      <---------DEAR3(1)------ --------ANAC58      <---------ANAC46                   --------->TGA1a      <---------ANAC46  <----- ------DOF2         <---------LBD16                 --------->SPL7   <---------WRKY38(1)  ---------->DOF2 ----ANAC58     <---------ANAC58             <--------P <---------O2 <---------WRKY12--------------->AGL15 ----ANAC58     <---------ANAC58             =====================MYC_MYB   <---------ABI4(1)  ------   ttcttggtttgttttgtttcttggcggattcttttgctctctctagggtaagcgttcgacgtcagatcaagtcaacgaggcggtgaactacataaagtat  21052500  Previous    Next  AGI:  At5g51780.1    Description:  basix helix-loop-helix (bHLH) family protein. similar to basix helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT4G25400.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67627.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 21052049    to: 21053999    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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