Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <---------ICU4                                                                               --------->ATHB12                                                                              <---------YAB1                                                                      <---------HSFB2a(2)                                                                      --------->HSFB2a(2)                                                                      --------->HSFC1(1)                                                                  <----------DOF2                                  <------------MYB.PH3(1)         ===================================       ---------->DOF2       <------MYB46(1)                    ------>ZmHOX2a(1)     --------->DEAR3(1) -------->HVH21              <---------MYB46(3)              <-----------GT1  <---------ATHB12 ---->LBD16                  <------MYB83                <----------DOF2      --------->ICU4 ----ANAC46               <-------GAMYB                  <---------DAG2   <---------KAN4(2)   ------- ---LBD16                <---------DEAR3(1)  ---------->DOF2 ---------->ID1 --------->YAB1    <------   gtgatgagttaaagcatttgtttttcggcgttggtaacagtttcccctaaaacgactcactttttcctctttctcgaataatcattcgccgaaggctgat  21028200           ---------->CDC5   ------->MYC3   --------------------->WRI1   <-------MYC3  --------->O2    <---------WRKY18(1)                                                              <-  <---------TGA1a--------->WRKY12              --------->RAP2.6(2)                 <---------TOE1(3)  <---------O2   ----------->HVH21           ------>NtERF2                         <---------TOE2(3)  ====================MYC_MYB               ------>NtERF2                          --------->MYB59 --  --------->TGA1a--------->WRKY38(1)        --------->LBD16                  --------->LBD16  ------- ===========bZIP_DOF                       <---------RAP2.6(2)              --------->LBD16   <------MYB46(1) -->At4g35610    --------->WRKY45         <---------LBD16              <---------GLK1(1)      <------MYB83 ---At4g35610   --------->DOF5.7(2)     <-----------GT1   <---------TOE2(3)<---------LBD16   --------   ggccacgttggactcagcgttgaccaagttttggatgatttttttccggcctccatatttatggtatagtttgaattccccgatttaggtttagtttggt  21028300                                               --------->ARR14(2)                                               <---------ARR11(3)                                               --------->ARR11(3)                                      ---------->DOF2                      ----------->GT1               ---------->DOF2    --------->ORA47(1)                <---------------AGL15          <- --------ANAC55(2)              --------->DEAR3(2)                 ----------------->AGL1          -- ------->ANAC55(2)      <---------ZAT14 --------->ANAC58 <---------At4g35610                      === ---->GT1 ----------->GT1 <-----------------AGL1--------->CCA1(2)  ----------------->AG           <-- ->MYB59---------->DOF2 --------->ZAT14 --------->ANAC58 --------->At4g35610          ----------->GT1   taagtaagtagaaagtcaaaagttagtttactaaaccggccaaagccaagatatacagtagctgattttccctaaacgagttactaaaccgtattaacta  21028400                                                           --------->ATHB12    --------->YAB1           <------ZmHOX2a(2)                              <---------AHL20(2)   -------->HAHB4   <------MYB46(1)                                        <---------AHL20(1)   <---------ICU4   <------MYB83         <---------MYB52(1)                --------->AHL20(2)  <---------ATHB51    <-- --------ARR14(2) <---------AHL20(2)              <-----------GT1        --------->YAB1 <---------ARR14(2) ------->ARR14(2)<---------AHL20(2)            ------->TEIL<---------AHL20(2) --------->ICU4     <--- =================HOX2a_HOX2a               <---------ATHB12<------------CBF  <---------YAB1     <--- ----ZmHOX2a(1)  --------->AHL20(2)------------>CBF       --------->AHL20(1)--------->YAB1 <---------LBD16   ggatttggtttagatcaaatttttttgttagtcaaaactcaatctaatgaattttccaaatttattgggccttaaacataataatgggccgatttcggag  21028500                                <------ZmHOX2a(2)                               ------->TEIL                               <---------AGP1                               --------->GLK1(2)                               <-----------ARR10                               --------->ARR11(3)                            --------->ANAC58                            --------->ANAC46                            --------->ANAC58                            --------->ANAC55(1)                    ----------->RAV1(1)                                            <---------ETT(2)                   --------->MYB46(3)                                         <---------ZAT2                  ------>MYB83 <---------ARR14(2)                             --------->ZAT2             XXXXXXXXXXXXXXXXXXX>MIR172B*                                     --------->At4g35610           ----------->RAV1(1)<---------CCA1(2)                               <---------At4g35610      --------->GLK1(1)     --------->ANAC55(2)                              ------->TEIL      <---------GLK1(1)    <---------LBD16  ---------->DOF2                  --------->GLK1(2) <---------ZAT14  ------>MYB46(1)       --------->ANAC58               --------->TOE1(2)   <---------HSFC1(2) -------ANAC46   ----------->RAV1(1)    --------->ANAC58           <---------ARR14(2)      --------->HSFC1(2) --------------------TaNAC69(2)--------->ARR14(2)                  --------->ARR14(2)   ---------->DOF2 ---ZmHOX2a(1)  --------->AtMYB61------>ZmHOX2a(2)           --------->MYB52(1)    --------->ETT(2)--   gagtgaagaaatccaacaccaacaacattcacggatctgggctcgcaaaagcccatccaaaaaaaacagaatacgaacgaagctgtctacaaaagcttcc  21028600                            <---------ZAT2                            --------->At4g35610                     <---------GLK1(2)                            <---------At4g35610                    <------MYB83                            --------->ZAT2                         <------MYB46(1)                   <---------ARR14(2)                             --------->MYB59--------->LBD16                   --------->ARR14(2)                             --------->MYB111(1)               -               --------->HSFB2a(2)                              <---------MYB52(1)                  -        --------->ANAC46   ----------->RAV1(1)  --------->GLK1(2) --------->MYB46(2)<--------P  -----     <---------ZAT18   ------>ZmHOX2a(1)   <----------ID1     <---------YAB1    <-----------RAV1(2)<- ------->YAB1  <---------HSFB2a(2)   ------------>CBF   ---------->DOF2    ------>ZmHOX2a(1) --------   atagtaatccactccctctcgaatcctagcagcagagacatcaatgggacaatctagcaaaagtatgttaggttctccttctccaggtaagaattttggt  21028700                                                  <-------TEIL                --------->ARR14(2)                                                 --------->ARR14(1)           <---------ARR14(2)                                                 --------->GLK1(2)          --------->LBD16                                                <---------ARR14(2)         --------->HSFB2a(2)                            <---------MYB52(1)  <---------GLK1(2)          --------->ANAC46  <---------MYB52(1)   --------->GLK1(1)        --------->ARR14(2)        <---------LBD16 -------->LBD16       <---------GLK1(2)         --------->ARR11(1)    <---------ARR14(2)        ----- -------->ANAC46      <---------ARR14(2)   ----------->RAV1(1)        --------->ARR14(2)       <----- ---->PCF5            --------->ARR14(2)  <---------ETT(1)       <---------ANAC46       --------->HSFB2a(2) -----NtERF2     ----------->RAV1(1)   --------->GLK1(2)         ----------->GT1        <---------HSFB2a(2) ->MYB59        <---------ETT(1)  <---------DOF5.7(2) <---------MYB52(1)  --------->LBD16  --------->AHL20(2)   ccccgatagcctagtattccgacagattcccttagtaaacgattccgacagattcggttttgtcatgttgtgaatccccagaacttggttccataaattc  21028800                                                                                                  <--                                                                                                  ---                                                                                           --------->ATHB51               <---------YAB1                                                              <---------ICU4             --------->ATHB12                                                              <---------AHL20(2)            --------->ICU4                                                    ----------->GT1<-------            <---------YAB1                                           --------->ATHB12     --------->ICU4         --------->ZAT2                   <---------YAB1            <---------YAB1   ----------->GT1      --------->LBD16           <-------TEIL                        <---------AHL20(2)    <---------YAB1 ---->YAB1--------->YAB1    <---------TOE1(3)                    --------->AHL20(1)  --------->YAB1 --TEIL  <---------ZAT2     <---------TOE2(3)             <----------DOF2   <----------DOF2--------->AHL20(2)   ataaatcccccagcatgattagtgactcttaaggttcttagattacaataagcgtcttcgttttaagtatattattgactttgtaaatcgtaattatttt  21028900                              <---------At4g35610                              --------->At4g35610                       <---------AHL20(2)                    <---------ARR14(2)                 <---------ANAC46                 <---------ANAC58--------->At4g35610                 <---------ANAC58<---------At4g35610                                   ---------->DOF2     <----------DOF2--------->ARR14(2)                                        ----------->GT1     <-- -------AHL20(2) <---------ANAC55(2)      <-----------HVH21     <------ZmHOX2a(1)  <---------ARR14(2) ------>AHL20(2) --------->ANAC55(2)     <----------DOF2      <---------TOE2(3)--------->At5g28300<-- --YAB1  <---------At4g35610 <-----------RAV1(1)  ---------->DOF2           <---------------------WRI1   ttaaatgcttttgctgatttcgtatttgattctgctgctctctctttcagataaaaggaaggctgaggatgaattggagacagtgaatccaaagaagaag  21029000                                  --------->YAB1                              <---------AHL20(2)                                 <---------YAB1                              --------->AHL20(2)                               <---------ICU4                             <---------HSFB2a(2)                               --------->YAB1                             --------------->AGL15                              --------->ICU4                              --------->HSFB2a(2)         ---------->DOF2    --------->YAB1                            --------->GLK1(1)       -------   <---------ZAT14      <<<<<<<<<TBF1                                <---------GLK1(2)     <---------GLK1(2) -------ANAC58      <-----------GT1       --------->YAB1       ----------->HVH21      ----------->RAV1(1) -------ANAC58     <<<<<<<<<<GT-3b-------->HAHB4        <-----------GT1   <---------------AGL15   gcgagtgttcttaaagcctatttttcttcttcataatgatacaatgactattttgttttcactctctaacagatttctataaaatggacaacagataatc  21029100  Previous    Next  AGI:  At5g51730.1    Description:  nucleotide binding. similar to ATRANGAP1 (RAN GTPASE-ACTIVATING PROTEIN 1), nucleic acid binding [Arabidopsis thaliana] (TAIR:AT3G18610.1); contains domain PTHR10432:SF59 (PTHR10432:SF59); contains domain SSF54928 (SSF54928); contains domain PTHR10432 (PTHR10432) Range:  from: 21028644    to: 21030883    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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