Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          ------>ZmHOX2a(1)             ------->GAMYB                          --------->ARR14(2)            --------->MYB46(3)                      <---------ARR14(2)       <---------YAB1            <---------MYB111(2)                  <---------MYB59           <-----------GT1          <-----------GT1         <---------TOE2(3)------>MYB46(1)      <---------ICU4     --------->AHL20(2)           <---------TOE1(3)------>MYB83<---------ARR14(2)     <---------AHL20(2)  ---------->DOF2     ----------->HVH21 --------->ARR14(2) <---------AHL20(2)   caaaattttaaataacaacctagaaaaaaaagagttaaggttagcctatgaccaaatcctttgcaaatacttcaaaattactattttaaaatttgcaacg  21026400                                                                                          -----------                                      --------->YAB1                                   <-----------GT1            --------->AHL20(1)       <---------YAB1                                  --------->CCA1(2)            --------->AHL20(2)     --------->YAB1                                   <---------ARR11(3)            <---------AHL20(2)    <---------------AGL15                             --------->ARR11(3)  <----------DOF2                 --------------->AGL15     ------->TEIL        ---------->DOF2   aattcttttgcaaattttttatgtatggaactatttctcataatagtttacttagttagacgaatttgagaacaaaaattagaaaagatatacagtatat  21026500                                             ----------->GT1                         --------->AHL20(2)                                        --------->YAB1                               --------->AHL20(1)                                   --------->TOE2(3)                    <---------AHL20(2)                                   <----------DOF2  --------->ANAC46   --------->AHL20(2)           -                             <-----------GT1<---------TOE2(3)          <---------AHL20(2)         --- >GT1                   <---------ZAT6--------->AHL20(2)   <-----------GT1           <---------AHL20(1)   atgtgtattctttcatcttaaaaatagtgtttttcatctttaaaataatgttatacacaattttctatgtgtattaatttgaatcaatataatataagaa  21026600                                             --------->At4g35610                                  <--                                             <---------At4g35610                               ------                                             <---------ZAT2                   --------->O2     ------                                   <---------AHL20(2)                         --------->TGA1a  <-----                                   <---------AHL20(1)                         <---------TGA1a  <-----        ----------->GT1            --------->AHL20(2)                         <---------O2     <-----    --------->DAG2                 --------->AHL20(1)                         =======================   ---------->DOF2                <---------AHL20(2)                  <---------AHL20(2)      <------ -------->AHL20(2)       ----------->GT1     --------->ZAT2      <---------YAB1               <------ ------>TOE2(3)  <---------YAB1   --------->AHL20(2)   --------->YAB1--------->AHL20(2)  <-----------GT1   cattaaaaagttgtaaattctaaatgtaagtaaaaaataaattttgcagctgatttttcatatttttgtgattaaatctcatgtgagtttgtgaccatat  21026700                                    <---------ANAC46                                 --------->O2 <---------YAB1                  --------->bZIP60(1) --------DOF2                    <---------O2 --->ARR11(3)                    <---------bZIP60(1) --->ARR14(2)                 --------->ANAC46 ----ARR11(3)             <----------DOF2                          <---------ARR11(3) ----ARR14(2)             <---------DAG2            <---------ANAC46 ----ARR11(1)          --------->ANAC58             <---------ANAC58            <---------DAG2<------ ========bZIP_DOF      --------->ANAC58             <---------ANAC58            <----------DOF2     < ---CCA1(2)            --------->ANAC46   --------->At4g35610    --------->ANAC58            <------- ---ARR14(1)         <---------ALFIN1     <---------At4g35610    --------->ANAC58     <----------DOF2   cttttgattcttccatctcatacacacgctttacgacgtcgtttagcagagggagcgtgatggccacaagctctctctctccctttacctttcatatatc  21026800                                                                                                <----                                                                                                -----                                                                                               ======                                                                                               <-----                                                                                       <-------MYC3                                                                                       <-------PIF5                                                                                       <-------MYC4                                                                                       ------->MYC3                                                                                       ------->MYC2                                                                                       ------->PIF5 --------->ARR14(2)                                                                    <-------MYC2 --------->ARR11(3)                                                                   <---------HSFB2a(1) <---------ARR11(3)                                                               --------->ANAC58 ---ARR11(3)                                                                      --------->ANAC58 ---------CCA1(2)                 ----------->RAV1(1)                      --------->YAB1--------->SPL7 --CCA1(2)        *TSS     <---------ATHB12              ----------->GT1  <---------YAB1 <-------TEIL   taatatcttctgtcttacttcataaacaaatcactgccacatagagagtgagtaagagagagttattccaatggctatcatcgcaagcacgttcggcacg  21026900                 <---------HSFB2a(1)                 <---------ZAT2                 --------->At4g35610                 <---------HSFC1(2)    --------->LBD16                 --------->ZAT2        <---------LBD16                                         <-----                 --------->HSFB2a(1)  <---------LBD16                                         -------                 <---------At4g35610 <---------LBD16          --------->ZAT2                  <------                 --------->HSFC1(2) <---------At5g28300       --------->At4g35610             <------NtERF2             <------NtERF2         <---------WRKY38(1)        <---------At4g35610   <---------At4g35610            ------>NtERF2         ----------->HVH21     ---------->DOF2      <---------MYB46(3)------            --------->LBD16 --------->ANAC58          --------->ANAC58      --------->ALFIN1 <-------           <---------ANAC46 --------->ANAC46          --------->ANAC58      <---------ANAC46---------   ----------->ARR10    --------->AtLEC2         --------->ALFIN1         <---------MYB46(3)<-------- ---PIF5   --------->DEAR3(1)    <-----------HVH21 <---------SPL7        --------->ALFIN1--------->DAG2 -->PIF5   <---------LBD16  --------->ANAC58   <---------O2  ----------->RAV1(1)    --------->At4g35610 ====================================bZIP_DOF <---------AtMYB61          <---------AtMYB61  <-------- ----TGA1a<---------LBD16 ---------->DOF2     --------->ALFIN1<---------ZAT2<---------AtMYB61<-------   gggctaagttacgccggggagcttccattcaagccagtcaccgggggagaggtgggacgaaagcagcagagaatggtggtggtgagagcagaaggcggtg  21027000     --------->WOX13(1)                 --------->WRKY38(1) ----AtMYB61                          <-------GAMYB -->ATERF1(1)                        <---------MYB46(3) -GAMYB            ---------->DOF2   --------->MYB111(2) --->ALFIN1    <------ZmHOX2a(2) <---------TOE1(3)           --------->ZAT2 --MYB46(3)   <---------ARR11(3) <---------TOE2(3)        --------->DEAR3(1) >ALFIN1<---------LBD16--------->MYB52(1)            <-----------HVH21 -DREB2C(2)  --------->GLK1(1)   --------->DAG2--------->LBD16--------->HSFB2a(1)                <--- -DEAR3(1)--------->LBD16      --------->CCA1(2)  <-------GAMYB<----------DOF2               <-------TEIL --ORA47(2)  <---------GLK1(1)--------->ARR11(3) <---------MYB46(3)                      <---------TOE1(2)   gaggtatcaatccggagatcagaaagaacgaagataaggttgttgactccgtcgttgtcaccgagctttccaagaacataactccctattgcaggttcac  21027100                                                                   --------->AtLEC2                                                            --------->AHL20(2)                    ---------->DOF2                         <---------AHL20(2)               ---------->DOF2                             <---------AHL20(2)                  ------            --------->MYB59                                --------->AHL20(2)                  <-----        <---------AHL20(2)                                 --------->YAB1                      ------       --------->AHL20(2)                              <---------AHL20(2)                      ------       <---------AHL20(2)         --------->At4g35610  --------->AHL20(2)                     <------     <-----------------AG         <---------At4g35610  <---------YAB1        --------->ICU4<---------TOE2(3) ------GLK1(2)<------ZmHOX2a(1)  --------->MYB59--------->YAB1 --------->ARR11(3)      --------->TOE2(3)   attctcttattaattaggaaagaaaagaacatagttagctactatttgaatcatgttttaattaaaatcatgcatagtagtgatttatacattaatgtat  21027200                                         <---------GLK1(2)                                         --------->ARR11(3) ->TEIL                                  <---------ARR11(3)                   <---------------AtSPL8 ----ARR14(2)                   <---------At4g35610  <---------ICU4        --------->MYB46(3)<------- --->ARR14(2)             --------->HSFC1(2)        --------->ICU4     <---------MYB52(2)--------->ANAC55(2) --->ARR11(3)             <---------HSFC1(2)   --------->TOE2(3)     --------->MYB52(1)  <---------ANAC55(2) ---CCA1(2)            ---------->DOF2<---------TOE1(2)          <-----------GT1--------->TOE1(2)   cttcatactaatccatatgttttgccaaagcttctgctcgtaagatttttcttaattagtagtctttttacaaacgaacaaatgtacgaataagtatttt  21027300  Previous    Next  AGI:  At5g51720.1    Description:  similar to Os07g0467200 [Oryza sativa (japonica cultivar-group)] (GB:NP_001059590.1); similar to hypothetical protein OsI_025030 [Oryza sativa (indica cultivar-group)] (GB:EAZ03798.1); contains domain PTHR13680 (PTHR13680); contains domain PTHR13680:SF1 (PTHR13680:SF1) Range:  from: 21026818    to: 21027571    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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