Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------ANAC58                                                                  <---------ANAC55(1)                                                                  --------->ANAC55(2)                                                                  <---------ANAC46                                                                  <---------ANAC58                                                                  ----------->GT1                                                                  <---------ANAC55(2)                                                                 <-------TEIL                                                                --------->CCA1(2)             <------                         <---------ZAT14                       --------->ARR14(2)           ---------                         --------->ZAT14               --------->MYB46(3)                 --------->At4g35610               <---------ANAC58                      <---------ARR14(2)      --------->At4g35610               <---------ANAC58                     <------ZmHOX2a(1)  ---------->DOF2    <---------At4g35610 ------>GT1  <---------YAB1  <---------ANAC46--------->MYB52(1)<---------ARR14(2) ---------->DOF2----   gtgaaactggacgttttgagtggtctctgttctgtagaaatagtcagtaacagaggaaccaatgggatacgtgaaaagaagcagagaagcgaagatgacg  20994500                                              <------ZmHOX2a(1)                                           <---------LBD16                                          <  ----------->GT1                          <---------HSFB2a(2)                                      - -----------------TaNAC69(2)               --------->HSFB2a(2)    <----------DOF2            -------- -->TGA1                              <----------DOF2 ----------->RAV1(1)                --------->ANAC58 ------>DOF2 --------->AtMYB61        <---------DAG2 --------->MYB46(3)                  --------->ANAC58   aaagaagttaatccaccaatagcaaatgcaattgaagaaacttttcgaggaaacaacaacacagtcgtctttgaatttgaaactcgtggagaagccaaag  20994600                                                                            --------->LBD16                                                                            --------->At4g35610             --------->ANAC46                  <---------WOX13(1)           <---------At4g35610          <---------ZAT14                    --------->ATHB12           <---------ARR14(2)          --------->ZAT18                --------->YAB1          --------->MYB52(1)          --------->ZAT14                -------->ATHB1        <---------MYB59      <-----------GT1                    <---------ICU4      <-----------ARR10  <---------ARR11(3)                    <---------ATHB12    <---------CCA1(2) ---------YAB1                          --------->ICU4    <---------ANAC55(2)            ---------->DOF2 -------->ICU4         --------->YAB1 --------->WOX13(1)  --------->ANAC55(2)      --------->YAB1 -->DOF2  <---------ZAT18     --------->MYB52(1)   <---------WOX13(1)   --------->ARR14(2)   tcatgatttttctgcacaaaacctataaaaaaaaacagagcaatcattcattgatggattacatatctaactgggttccgctaaatcacaataaagtttc  20994700                                    ---------->DOF2                             <---------ANAC46                             <---------ANAC55(2)                             <------MYB83                                                   =========                             <------MYB46(1)                                                <------ZmHOX2a(2)                             ----------->GT1                                           <------ZmHOX2a(1)                            --------->MYB59                                          --------->ANAC58   <-----------GT1    <---------------AGL15                       --------->YAB1     --------->ANAC58   gatttttacaatttgtttactaatctctattaggtgaaaaaaggaatcaataagagaaaaacttacatttagaattgaaaacgagacaaggacgatcgaa  20994800                                       <---------HSFB2a(2)                                       --------->HSFB2a(2)                                     <------ZmHOX2a(2)                                     --------->CCA1(2)                                    <---------AGP1                                    --------->ARR14(3)                                    --------->AGP1                                    <---------ARR14(3)                                    <---------ARR14(2)                                    --------->ARR11(3)                             <----------ID1                    --------->AHL20(2)------>ZmHOX2a(2)                 ===========================HOX2a_HOX2a                 ============================HOX2a_HOX2a               ------------>CBF                ----------->GT1     --------->ARR14(2)      --------->ALFIN1        <----------DOF2  <---------AHL20(2)               <---------ANAC58               ---------->DOF2       <---------ANAC58 <---------AHL20(2)                <---------ANAC46           ----------->GT1       <---------ANAC58 --------->AHL20(2)          <---------------------WRI1     <------------CBF  <----------DOF2<------ZmHOX2a(1)----------->ARR10*TSS   <---------ANAC58      <---------YAB1 =======================HOX2a_HOX2a <---------ARR11(3)   <-----------------------TaNAC69(2)   gaagcttttgctttggagaggaataaataaatcgacaagatctgggagtttgagagagaagcgtggaaggaagaacaatgttatgaattgttaaagtcaa  20994900                                                                                                 <---                                                                                                <----                                                                                                <----                                                                                                -----                                                                                               ------                                                  <-----------GT1                          <---------ARR11(3)                                                 <<<<<<<<<<GT-3b             <------MYB83  --------->ARR11(3)                                             <---------AHL20(2)              <------MYB46(1)  <------                                     <------ZmHOX2a(1)  <----------DOF2 --------->ATHB12  --------->YAB1  <---------YAB1            ------------>CBF<---------AHL20(2)     <---------YAB1    <---------ANAC46   acttattttagtcaaaaaaaaaaaaaactaaacaatttaggagttttttatttttcttcttttgaagttatttttgatttggttattgtgtatgatatta  20995000                 --------->At5g28300                 <-------GAMYB                ----------->GT1               <---------ANAC46             <-----------GT1          -------->HAHB4          --------->ATHB51          -------->ATHB1          --------->YAB1          <---------ICU4          <--------HAHB4         --------->ICU4       --------->YAB1      <---------YAB1         <--------HAHB4      <---------AHL20(2)     <---------ICU4      --------->AHL20(2)     --------->ATHB51 ------YAB1 <---------YAB1  --------->ICU4 -----AHL20(1) <---------TOE2(3)                               <---------WOX13(1) -----AHL20(2) <---------TOE1(3)                            <---------AHL20(2) ---->AHL20(2)<---------At5g28300                      <---------DAG2                              -- --->YAB1<---------YAB1     <---------YAB1             <----------DOF2  <---------GLK1(2)         <-- ---YAB1 <---------ATHB51 --------->YAB1      ------->TEIL  <---------YAB1  <---------YAB1      <----   taattcatataattattacggttatatttcataattagtttaatcgtgtatgttcaacttttttaattgaactagattattagttaaactaaatcgaatt  20995100                                                        --------->ARR11(3)                                                        --------->GLK1(2)                                                        <---------ARR14(3)                                                        <---------ARR11(3)                 --------->ARR11(3)                     --------->ARR14(2)             <---------MYB52(1)                         <-----------ARR10   <---------MYB46(3)<---------AHL20(2)          --------->WOX13(1)   <------MYB46(1)   <---------YAB1             <---------AHL20(2)   <------MYB83  <---------ARR11(3)      ----------->GT1--------->ARR14(3) ------->ATHB12  <---------GLK1(2)   <-----------GT1--------->YAB1 -------YAB1<-------GAMYB <---------AHL20(2)    --------->AHL20(2) -------GT1<---------ZAT6--------->AHL20(2)    --------->AHL20(2)        <---------YAB1       -------   acgattggttagactgttagatttttattaaatcaaatttaacttgaaaataaatcaaaatcttcactcttcattttgattaaactaaacaaaaaataaa  20995200                                                                                  <-------GAMYB                                                                                 ----------->GT1                                                                                <---------ANAC46                                                                                <---------TOE2(3)                                                                                <---------TOE1(3)                                                                           <---------ICU4                                                                           --------->YAB1                                                                           -------->ATHB1                                                                           --------->ATHB51                                                                           <--------HAHB4                                                                           -------->HAHB4                                                                          <---------YAB1                                                                          --------->ICU4                                                                          <---------ATHB51                                                                        <---------ICU4                                                                        --------->YAB1                                                                       --------->ICU4                                                                       <---------YAB1                                                                      --------->AHL20(2)                                                                      <---------AHL20(2)                                                                      <---------AHL20(1)      <------                                                             <---------ANAC58  <---------At5g28300                         ---------->ID1            <------MYB83      --------->YAB1           -------                        <-----------GT1            <------MYB46(1)  <---------YAB1--------->At5g28300                    <----------DOF2               --------->MYB59--------->ARR11(3)           <------                  ---------->ID1         <---------YAB1      <---------ANAC58 <-----------GT1<-------          <------ZmHOX2a(1)<----------DOF2    --------->ATHB12   <---------ARR11(3)          -------- -->AHL20(2)     <-----------GT1         <---------AHL20(2)  <---------AtLEC2<---------YAB1--------->YAB1   ctaaacaatttaggagttttttcttttttcttttttgaagttttttattgatttggtcattttgcatgatattataattattacggttatatttcataat  20995300                                                                    <------MYB83                                                                    <------MYB46(1)                                                             <---------------AGL15                                                             --------------->AGL15         <---------AHL20(2)                                                            ----------------->AGL3        --------->YAB1                                                            <-----------------AGL2       <---------YAB1 ---ICU4                    <---------WOX13(1)              <-----------------AGL3    <---------AHL20(2) -->ATHB51               <---------YAB1                     <-----------------AG      <---------YAB1 --HAHB4            <----------DOF2      <---------YAB1   ------>MYB46(1)         <---------ARR11(3) --YAB1             <---------DAG2   <---------GLK1(2)    ------>MYB83            --------->ARR11(3) ->ICU4    ------->TEIL  <---------AHL20(2)             <---------MYB59           <---------GLK1(2)--   tagtttaatcgtgtatgtccaacttttttaattgaactagattattagttaaactaaaccgaactacatttggttagactattagatttttattatatca  20995400  Previous    Next  AGI:  At5g51640.1    Description:  YLS7 (yellow-leaf-specific gene 7). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25360.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25360.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN70095.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 20992406    to: 20994851    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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