Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 --------->MYB52(1)                                                                     --------->ATHB51                                                                     --------->ATHB12                                                                     -------->ATHB1                                                                    <---------YAB1                                                                  --------------->AGL15                                                                  <---------------AGL15      <---------GLK1(1)                                          ----------------->AGL2      --------->GLK1(1)                                          <-----------------AGL1             - --------YAB1                   --------->ZAT6  <----------DOF2  <-----------------AGL3           <-- -----AHL20(2)              ------>ZmHOX2a(2)   <---------DAG2   <-----------------AGL2   -----------   tatgatggaaatctcatactgtatttctgatctaagactattggaaacaactttttttttttttttgactattattggaaacaactgttttgatgacgag  20938300                                                                   <---------MYB52(1)    <----------DOF2                         --------->TOE2(3)     <-------GAMYB   ------>ZmHOX2a(2)             --------->AHL20(2)         <---------AHL20(2) --------->ARR11(3)              <---------AHL20(2)        --------->AHL20(2) <---------ARR11(3)          --------->AHL20(2)            <---------AHL20(1) -------->YAB1              --------->AHL20(1)             <---------AHL20(2)          <-----------GT1 -------KAN4(2)             <---------AHL20(1)    --------->AHL20(2)     --------->AHL20(2) >TGA1                ----------->GT1      --------->YAB1  --------->AHL20(1) --------->ARR11(3)  <--   aatgatctttattcatcgaagagatagtaatatatataaattctaacataaaaaaaatcaatttattcggttagattatatatcatgttttacatatgtt  20938400                          --------->YAB1                         <---------YAB1                       <---------ICU4                       --------->YAB1                      --------->ICU4                                                          -------                     --------->AHL20(1)                                                      --------                    --------->YAB1                    ---------->DOF2                       ---------         --------->AHL20(2)                 --------->YAB1                       <-----------GT1    -         <---------AHL20(2)                 ----------->GT1          <---------TOE2(3)---------->DOF2 -------YAB1      --------->AHL20(2)      <---------WOX13(1)         <---------ANAC55(2)<----------ID1   atacttgatattaaaaaaaaaaaaataatgaaaacaaaaatttgaatgataaaaaaaaaagagaatgaattaagtatagtttttaacaaaaagaaaaagt  20938500                                                  <------ZmHOX2a(1)                                              --------->MYB52(1)                                              ---------->DOF2                              ----------                                           <---------At4g35610                   <------MYB46(1)                                       <----------DOF2                           <------MYB83                                     --------->ICU4                             --------->MYB59                                  <---------MYB52(1)                        <------MYB46(1)<------MYB83 ---->GT1                        <---------RAP2.6(3)                        <---------MYB46(3) ->DAG2                         --------->RAP2.6(2)                         <------MYB83   <------MYB46(1) ->DOF2  ----------->GT1    --------->MYB59--------->At4g35610             <---------AtMYB61<-------GAMYB -------->YAB1      --------->AHL20(2)<---------ICU4                       --------->MYB59--------->MYB59   aagaataagtatagttattcaaaaaaatgttaggccgtaatctttagctaaaggatttagctcggtttagtttgggtttggttcggtttagttcggttaa  20938600                                                                              ------>MYB46(1)                                                                --------->ANAC46                                --------->GLK1(2)               --------->ANAC58                                <---------ARR11(3)            <---------ALFIN1------>MYB83                                --------->ARR11(3)       --------->TOE1(3)  --------->AtMYB61                        <----------ID1            >>>>>>>>>WRKY6--------->ANAC58   <----------DOF2                  --------->AHL20(2)       <----------DOF2 *TSS------->GAMYB--------->DEAR3(1) ->GT1  ------>ZmHOX2a(1)----------->RAV1(1)    --------->WRKY38(1)      <---------ALFIN1       <----   atgctaaatcctatcgaaaaataaaaacaacaaaaatctaataaactttgttgactataccctaacaccctactaacacctccctctttcaatctccgat  20938700                                                            <--------P                                                         --------->MYB55(2)                                                         <---------MYB46(3)                                                        <---------ANAC46                                                       <---------LBD16                                                       <------NtERF2                                                       --------->ATERF1(1)                                                      <---------RAP2.3(1)                                                      ------>NtERF2                                                      <---------RRTF1(1)                                                     <---------ATERF1(2)                                                     <---------RAP2.3(3)                                                    --------->ATERF1(1)                                       --------->ZAT2<---------DEAR3(1)                                       --------->At4g35610 --------->REM1(2)                                       <---------At4g35610<------NtERF2                                       <---------ZAT2--------->ATERF1(2)                                      ----------->RAV1(1)------>NtERF2                                    <-------TEIL    <------NtERF2                            <------NtERF2           --------->SPL7                           --------->LBD16         ------>NtERF2                           <---------ATERF1(1)     --------->MYB52(1)                           ------>NtERF2           <---------ATERF1(1)             ------>ZmHOX2a(2)                          --------->DEAR3(1)      ----------->HVH21               <------ZmHOX2a(2)                          --------->ATERF1(2)     --------->DEAR3(1)             <---------ARR14(2)                          <---------ATERF1(2)    --------->DEAR3(2)              ------->TEIL                          <---------DEAR3(1)    <---------At4g35610              --------->ARR14(2)       --------->ANAC58  <---------LBD16  --------->At4g35610             --------->DEAR3(2)       --------->ANAC58  --------->ATERF1(1)    --------->At4g35610    <---------SPL7 --ZmHOX2a(2)           <---------RAP2.3(1)  <------ZmHOX2a(1)       --------->ALFIN1  --------->GLK1(1)   caaatacaaacgcatacttccaatttcgccggcgaagatgcagcagaggaagccgacggcgggtagacccagtggtaccgatggatccgatttctcatac  20938800                                                        <----------DOF2                                                        ------>ZmHOX2a(1)                                                    <---------ARR11(3)                                                    --------->ARR14(2)                                                    --------->AGP1                                                    <---------ARR14(2)               --------->O2                         <---------GLK1(2)               <---------O2                      --------->HSFB2a(2)                         <-------               --------->TGA1a            ------>ZmHOX2a(1)                                 <--------               <---------TGA1a            ===================HOX2a_HOX2a                    <--------        --------->WRKY12            <---------ARR14(2)  ===============================HOX2a_HOX2a        --------->WRKY38(1)         <-----------ARR10<------ZmHOX2a(2)              <-------MYC3        --------->WRKY45 --------->HSFB2a(2)     <---------HSFB2a(2)                ------->MYC2       --------->DOF5.7(2)          --------->ARR14(2)------>ZmHOX2a(2)             ------->MYC3      <-------GAMYB--------->MYB52(2)     ==================HOX2a_HOX2a             <-------MYC2      ===================MYC_MYB   <---------CCA1(2)--------->ARR11(3)          ------>ZmHOX2a(2)     <---------MYB46(3)  <---------HSFB2a(2) <-----------HVH21       <---------ARR11(3) <----------DOF2   cgcatggtcgttgactctcgtgagtttccaaaactccaaatctcctctgtcccagatcctttttctctcaatttcttcttgatccatgtgctttgctttg  20938900                                                         <---------TOE2(3)                                                         <---------TOE1(3)                                                        <-----------RAV1(2)                                                  <----------DOF2 <---------TOE1(3)                               ------>ZmHOX2a(2)                              <---- <---------TOE2(3)                             --------->ARR11(3)                         <------MYB83 --------->MYB59           --------->DAG2      <---------ARR11(3)       <----------DOF2   <------MYB46(1) ---DOF2            ---------->DOF2        <----------DOF2--------->ANAC55(2)           <---------WOX13(1) -ANAC58       --------->ZAT18             =============HOX2a_HOX2a------->TEIL       --------->ATHB12 -ANAC58 --------->ANAC46 ---------->DOF2  ------>ZmHOX2a(1)      <---------GLK1(2) <---------WOX13(1)   ttttaggttacacgaaggtcactaaagaaaaagctcgtctccgtcctttgatctttgttcaggtaattgaatctctttgattttggattgattggtctat  20939000                                                                                     <---------ICU4                                                                                     --------->ATHB51                                                    <---------ICU4                   --------->ATHB12                                                --------->AHL20(2)                  <---------YAB1                                       <---------ZAT14                              --------->ICU4                                       --------->ZAT14                            --------->YAB1                                  <----------DOF2--------->WOX13(1)              --------------->AGL15                                  ------>ZmHOX2a(1)<---------ATHB12          <---------GLK1(2)                        ----------->GT1--------->ZAT18          <---------ANAC46 <---------YAB1 -----YAB1     ------->TEIL<-----------GT1      <---------AHL20(2)        <-----------RAV1(2) <------   aattcgattttgtgatgcatttcaaaatgttacatcctttgagcactgaattaatcaattcatgtttagtatatgatcaggttctcataattgcaatatc  20939100                                                                                                    -                                                                                                    <        --------------------->WRI1                                                          <--------        <----------DOF2                                                                     ---------       <---------ANAC58                                                                  ------->TEIL       <---------ANAC58                                                                 <---------CCA1(2)    ---------->ID1<---------WOX13(1)                                                  --------->ANAC55(2)    <---------MYB52(1)                                                                <---------ANAC55(2)  --------->MYB52(2)                                                                --------->CCA1(2)  <---------MYB46(3)                  <---------TOE2(3)                            <---------ARR11(3) <-------TEIL  <---------YAB1   <---------YAB1            ---------->DOF2          --------->ARR11(3) ---ARR11(3)---------->ID1    <---------ZAT6<---------ANAC46                 <---------ANAC46 <------   acattcgttgctttgttctaattgaaattgtagtgttattgaagttgtgtagcattagtttaaagagtttgatattgttctgtgagatatgtatctcttt  20939200  Previous    Next  AGI:  At5g51510.1    Description:  similar to Os10g0508600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001065024.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAM94931.1); similar to expressed protein [Oryza sativa (japonica cultivar-group)] (GB:AAP54551.2) Range:  from: 20938659    to: 20940204    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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