Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                 <------MYB46(1)                                                                               <------MYB83                                                                            <------NtERF2                                                                           <---------DEAR3(2)                                                                           ------>NtERF2                                                                          <---------DEAR3(1)                                                                        <-----------HVH21                                                                       <---------O2                                                       --------->AHL20(2)--------->RAP2.6(3)            --------->GLK1(2)   <---------ANAC58   <---------ANAC58    <---------TGA1a           <---------ARR11(3)   <---------ANAC58   <---------ANAC46    --------->TGA1a           --------->ARR11(3)   <---------ANAC46----------->TGA1       --------->O2                --     --------->ALFIN1          --------->MYB55(2)  <---------ANAC58    --------->ANAC46            <-   <---------bZIP60(2)         <---------MYB46(3)  ----------->GT1     --------->bZIP60(2)        ---   <---------ANAC46<---------MYB46(3)           ----------->HVH21    <---------ALFIN1   <---------MYB46(3)   taatgaggtgggagattttggtgtttgaaacgatgggtgtgatgaagtctgtgacgtttaaatcggatgagccacgtcggcaggtctcggtgtttgtaag  20932400                                                  <-------PIF5                                                  ------->PIF5                                                  --------->DEAR3(1)                                                  --------->DREB2C(2)                                                 <------NtERF2                                                 --------->ATERF1(1)                                                 --------->DEAR4(2)                                                 --------->DEAR3(2)                                                 <---------At4g35610                                                <---------ATERF1(1)                                               <---------ARR14(2)             ------->MYC3                      <---------ALFIN1            --------->O2                       --------->DEAR3(1)            --------->TGA1a                   <------NtERF2           --------->ANAC58            <---------TGA1a                   <---------ABI4(2)       --------->AtLEC2            =====================================bZIP_DOF        --------->ANAC55(1)            <---------O2                      --------->ATERF1(1)--------->ANAC58          <---------ALFIN1                   <---------ATERF1(1) --------->ANAC58   --------->ZAT14                         <---------LBD16       --------->bZIP60(2)          -------   <---------ZAT14                    <---------DAG2       <------ZmHOX2a(1)  <---------LBD16 <------ ------->ALFIN1                       <----------DOF2 <----------DOF2 --------->ANAC58    <---------AtLEC2 --------DEAR3(1)                <---------ZAT18------>NtERF2    --------->ANAC46    <-----------GT1 ------>ZAT18<-------MYC3  <-----------HVH21--------->ANAC46   <---------ALFIN1 ----------->GT1 -----   cgcggtgctcagccacgtttgagcgtcgaagtcagtgcaacttttcgcggcaccggctttaggagacacgccatgcaatgtccggtttaactgcatgatc  20932500                                                                 --------->LBD16                                                                 <---------RAP2.6(3)                                                                --------->ETT(1)                                                                --------->LBD16                                                               <---------LBD16                                                               ----------------->AGL1------->PIF5                                                           <---------ANAC58          <-------PIF5                                                           <---------ANAC58         --------->ATERF1(1)                                                         <---------ARR14(2)        ------------>OsbHLH66                                                         <-----------ARR10<---------WRKY38(1)                        ------>NtERF2                --------->ZAT14      <---------ZAT18   ---------                        --------->LBD16              <---------ZAT14      <---------WRKY45 <---------ARR14(2)                       --------->ANAC46  <---------ANAC58--------->ARR14(2)       <------------OsbHLH66                    --------->ARR14(2)   <---------ANAC58--------->ARR11(3)      <------NtERF2           <-----------HVH21      <---------ANAC58   <---------ZAT18      <---------WRKY12 --------->ARR14(2) -->ARR11(3) <---------WRKY38(1)  <---------ANAC46 --------->LBD16       <<<<<<<<<<WRKY11 <------NtERF2 ---ARR11(3)--------->WRKY18(1)   <---------ANAC58<---------ANAC58       <<<<<<<<<<WRKY6<---------ANAC46 ->ZmHOX2a(2)<---------WRKY12--------->ARR14(2)   <---------ANAC58<------NtERF2--------->ANAC46   gtgtctccatagaggtcaatgcaatccgccaaaactgcttgtttcttgctatccgtgcagttcttgccggaattagtcaactcggcacgggcggatatgg  20932600                                                           <---------GLK1(1)                                                           --------->GLK1(1)                                                      <-------GAMYB                                                      --------->At4g35610                                                     --------->MYB55(2)                                                     <---------MYB46(3)                                                   <---------At4g35610                                                   <------NtERF2                                                 <---------DREB2C(2)                                                 <---------RAP2.6(2)                                                 <---------RAP2.3(3)                                                 <---------ANAC46                               =====                                                 --------->ETT(1)                               <----                                                 <---------DEAR3(1)                      <---------AtLEC2           --------->At4g35610                   <---------At1g77200                     <---------ANAC58           <---------At4g35610   --------->GLK1(1) <-------GAMYB          <---------HSFB2a(2)  <-----  <------ZmHOX2a(2)              <---------GLK1(1) --------->At4g35610 <---------ARR14(2)<---------ANAC46 --------->ARR14(2)          --------->ANAC46   --------->RAP2.6(3)  <---------MYB46(3)  <---------ANAC58 <---------ARR14(2)   <---------ICU4           <-----------HVH21    <---------AtMYB61   <<<<<<<<<<FUS3 >CCA1(2)<---------RAP2.6(2)<---------LBD16   <-----------RAV1(1)<---------MYB52(1)     <<<<<<<<<<ABI3   cccgatccatggctgcttccaccagcattactcggaactcggataattgtgtcggctgttgaaatccgttgtggttcttgaagtagcatttgcatggatc  20932700                                                <---------MYB46(3)                                               --------->ALFIN1                                               <---------DEAR3(1)                                        <---------At4g35610                                        <------NtERF2                                        --------->At4g35610                      <---------ATHB12 <---------ATERF1(1)                     ------>MYB83 <---------RAP2.6(2)                     ------>MYB46(1)  <---------DEAR3(1)                     --------->MYB52(1)<---------DEAR3(2)                   --------->AtMYB61<-----------HVH21           <-----------RAV1(1)    <---------ANAC58 ======================RAV        <---------ANAC58                  --------->ZAT14 -------RAV1(2)    --------->MYB46(3)--------->ATERF1(1)<------ZmHOX2a(1)            <---------AHL20(2) -ZmHOX2a(2) ---------->ID1   <---------GLK1(1)<---------AtMYB61    <---------ZAT14 --------->AHL20(2)   agggtatggagttttgtcgcaccaatcggtggaattgcggtcggctacggtggtgagaggatggacgcagagtagtactagtaatattaaatgtagaaat  20932800                                 <---------ANAC58                          <---------ANAC46                            <-----------RAV1(1)                         --------->ALFIN1                         <-------TEIL<----------DOF2                 --------->DAG2                    --------->YAB1--------------->AGL15          <---------HSFB2a(2)           ------                   <---------YAB1<---------ANAC46            <<<<<<<<<<MYB80              ---------->DOF2                 --------->YAB1  <---------ANAC58          <---------AtMYB61         ------->TEIL   agaatagagagtttttgcatcatcatattcatgttgcttcttttgttaacttgatgttgttttggtttgagaaggtggagttgaatgtaactcaaagtac  20932900                                                                   <---------AtMYB61        ---------                                                                 <---------ANAC46           ---------                                                                --------->ALFIN1      ----------->RAV1(1)                                         --------->TOE2(3)      <---------AtMYB61  --------->ANAC46                                       <---------ARR11(3)     <---------ANAC58     --------->ANAC58                                       --------->ARR11(3)     <---------ANAC58     --------->ANAC58                              ------------>CBF                <---------ANAC46   ---------->DOF2                            ------>ZmHOX2a(2)           --------->AHL20(1)      <---------AHL20(2)                          --------->ARR11(3)            --------->ARR11(3)  --------------->AGL15                          <---------ARR11(3)         --------->AHL20(2)<------------CBF     --------- ------>CBF     --------->ALFIN1      <---------CCA1(2)--------->AHL20(2)   <---------------AGL15 ---   aatgctagagactagagagtgggaacatgatcttcaatctatatcttaaatctaaaaatatatggtgtggtggtattgacatttaaagcaacacaagcaa  20933000                                        <--------P                                   <----------DOF2                    ----------->HVH21                                -------->P<---------ZAT2              --------->DOF5.7(2)                                ------->TEIL                        --------->ANAC55(2)                              ------>ZmHOX2a(2)                     <---------ANAC55(1)                             --------->CCA1(2)                      <---------ANAC58                             <------ZmHOX2a(2)                      <---------ANAC46     --------->AHL20(2)     --------->AGP1--------->At4g35610       <---------ANAC58     <---------AHL20(2)     <---------ARR11(3)                  <------------CBF        <---------DAG2 >ANAC58                    --------->ARR14(2)                <---------YAB1            <----------DOF2 >ANAC46                    --------->ARR11(3)       <---------At4g35610         ------>ZmHOX2a(1) >ANAC58<------------CBF    <---------ARR14(2)       --------->At4g35610<---------DOF5.7(2)       --- ------>YAB1        <---------YAB1<---------DAG2 <-----------RAV1(1)<---------ANAC55(2)<---------DAG2   acaaaatttatattgtgaggttatgagtgagatctacctttggtagctcgaatgctgctgttttcttattgcgtgaacgattcctatcacctttttctac  20933100                  --------->ARR11(3)                  <---------GLK1(2)                  <---------ARR11(3)                  <---------ARR14(2)                                <-----------GT1                  --------->ARR14(2)                            <---------YAB1        <----------DOF2      <------ZmHOX2a(1)                --------->AHL20(2)                  ---  --------->ARR11(3)      <------ZmHOX2a(1)                   <---------AHL20(2)         --------->AHL20(2)  <---------ARR11(3)   <---------LBD16                       <---------AHL20(2)          <---------AHL20(2)  <---------GLK1(2)    <-----------RAV1(2)--------->DAG2  <---------AHL20(2)            --------->AHL20(2) ------->DOF2   ----------->ARR10        ---------->DOF2 <---------AHL20(2) <----------DOF2  --------   taaagattttcttttagggagattttcaggaggaatactaacaaaaagttcgaccattttttatttattttagctattctttaaacacaaatttataaaa  20933200                                    ----------->RAV1(1)                        ----------->GT1                   --------->WOX13(1)                       <---------ZAT6     --------->ARR11(3)     <---------ZAT14                 <---------------AtSPL8   <---------ARR11(3)     --------->ZAT14               --------->MYB52(2)  <----------ID1      --------->ANAC46        --------->ARR14(2)       --------->ANAC58      --------->ANAC58        <---------ARR14(2)       --------->ANAC58      --------->ANAC58 ------>YAB1 <---------MYB52(1)  --------->ANAC46    ---------->DOF2                                - ->AHL20(2) --------->TOE2(3)  ---------->DOF2    ----------------------->TaNAC69(2)            -----   taagaattcatattcgttagtagtactggtaataaaagcaacaagaactagttttcaaagcaattacttcactatatactaatgtgagaaatattccaca  20933300  Previous    Next  AGI:  At5g51490.1    Description:  pectinesterase family protein. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT5G51500.1); similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT3G47400.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42679.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 20930779    to: 20932832    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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